prot_H-elongata_contig189860.5230.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig189860.5230.1
Unique Nameprot_H-elongata_contig189860.5230.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length62
Homology
BLAST of mRNA_H-elongata_contig189860.5230.1 vs. uniprot
Match: A0A8F0JZT7_9PHAE (Cytochrome c6 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZT7_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.150e-30
Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    1 MPEKTLKKEALSTNEMNSVGAITYQVTNGKNAMPAFGGRLSDVDITDVANFVLSQSDNDW 60
            MPEKTLKKEAL+ NEMNSV AITYQVTNGKNAMPAFGGRL+D DI+DVANFVL QSD+DW
Sbjct:   50 MPEKTLKKEALANNEMNSVNAITYQVTNGKNAMPAFGGRLTDADISDVANFVLGQSDSDW 109          
BLAST of mRNA_H-elongata_contig189860.5230.1 vs. uniprot
Match: A0A120HY83_9PHAE (Cytochrome c6 n=6 Tax=Sargassum TaxID=3015 RepID=A0A120HY83_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 6.350e-30
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0
Query:    1 MPEKTLKKEALSTNEMNSVGAITYQVTNGKNAMPAFGGRLSDVDITDVANFVLSQSDNDWN 61
            MPEKTL+KEALSTN+MNSVGAITYQVTNGKNAMPAFGGRLSD DI DVA+FVLSQS+  WN
Sbjct:   50 MPEKTLQKEALSTNQMNSVGAITYQVTNGKNAMPAFGGRLSDDDIEDVASFVLSQSEKSWN 110          
BLAST of mRNA_H-elongata_contig189860.5230.1 vs. uniprot
Match: A0A8E5XRM0_9PHAE (Cytochrome c6 n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRM0_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.280e-29
Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    1 MPEKTLKKEALSTNEMNSVGAITYQVTNGKNAMPAFGGRLSDVDITDVANFVLSQSDNDW 60
            MPEKTLKK+ALSTN+MN+V AITYQVTNGKNAMPAFGGRL+D DI DVANFVLSQS+ DW
Sbjct:   50 MPEKTLKKDALSTNQMNTVSAITYQVTNGKNAMPAFGGRLADTDIEDVANFVLSQSEKDW 109          
BLAST of mRNA_H-elongata_contig189860.5230.1 vs. uniprot
Match: A0A2R4QPS7_9PHAE (Cytochrome c6 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPS7_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.580e-29
Identity = 52/61 (85.25%), Postives = 57/61 (93.44%), Query Frame = 0
Query:    1 MPEKTLKKEALSTNEMNSVGAITYQVTNGKNAMPAFGGRLSDVDITDVANFVLSQSDNDWN 61
            MPEKTLKK+ALSTN+M+SV AITYQVTNGKNAMPAFGGRLSD DI DVA+FVLSQS+ DWN
Sbjct:   50 MPEKTLKKDALSTNQMDSVSAITYQVTNGKNAMPAFGGRLSDDDIEDVASFVLSQSEKDWN 110          
BLAST of mRNA_H-elongata_contig189860.5230.1 vs. uniprot
Match: A0A8F0JYE6_9PHAE (Cytochrome c6 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYE6_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 4.270e-28
Identity = 50/61 (81.97%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    1 MPEKTLKKEALSTNEMNSVGAITYQVTNGKNAMPAFGGRLSDVDITDVANFVLSQSDNDWN 61
            MP+KTLKK+ALS N+MNSV AITYQVTNGKNAMPAFGGRL D DI DVANFVLSQS+  WN
Sbjct:   50 MPDKTLKKDALSGNQMNSVSAITYQVTNGKNAMPAFGGRLGDTDIEDVANFVLSQSEKGWN 110          
BLAST of mRNA_H-elongata_contig189860.5230.1 vs. uniprot
Match: A0A8F0F8D4_9PHAE (Cytochrome c6 n=4 Tax=Alariaceae TaxID=2887 RepID=A0A8F0F8D4_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 4.390e-28
Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 0
Query:    1 MPEKTLKKEALSTNEMNSVGAITYQVTNGKNAMPAFGGRLSDVDITDVANFVLSQSDNDW 60
            MPEKTLKK+AL+TN+MNS+ AITYQVTNGKNAMPAFGGRLS+ DI DVANFVLSQ+D  W
Sbjct:   51 MPEKTLKKDALATNQMNSISAITYQVTNGKNAMPAFGGRLSEPDIEDVANFVLSQADKGW 110          
BLAST of mRNA_H-elongata_contig189860.5230.1 vs. uniprot
Match: A0A6B7EVB8_9PHAE (Cytochrome c6 n=3 Tax=Ectocarpales TaxID=2877 RepID=A0A6B7EVB8_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 5.890e-28
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0
Query:    1 MPEKTLKKEALSTNEMNSVGAITYQVTNGKNAMPAFGGRLSDVDITDVANFVLSQSDNDW 60
            MPEKTLKK+AL TN+MNSV AITYQVTNGKNAMPAFGGRLS+ DI DVANFVLSQS+  W
Sbjct:   50 MPEKTLKKDALGTNQMNSVNAITYQVTNGKNAMPAFGGRLSEEDIQDVANFVLSQSEKGW 109          
BLAST of mRNA_H-elongata_contig189860.5230.1 vs. uniprot
Match: A0A5A4MJ73_9PHAE (Cytochrome c6 n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MJ73_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.220e-27
Identity = 51/61 (83.61%), Postives = 53/61 (86.89%), Query Frame = 0
Query:    1 MPEKTLKKEALSTNEMNSVGAITYQVTNGKNAMPAFGGRLSDVDITDVANFVLSQSDNDWN 61
            MPEKTLKK AL  N+M SV AITYQVTNGKNAMPAFGGRLS+ DI DVANFVLSQSD DWN
Sbjct:   50 MPEKTLKKGALEENQMGSVKAITYQVTNGKNAMPAFGGRLSESDIEDVANFVLSQSDKDWN 110          
BLAST of mRNA_H-elongata_contig189860.5230.1 vs. uniprot
Match: A0A0S0GBE4_COSCS (Cytochrome c6 n=20 Tax=Laminariales TaxID=2886 RepID=A0A0S0GBE4_COSCS)

HSP 1 Score: 104 bits (259), Expect = 1.220e-27
Identity = 50/60 (83.33%), Postives = 55/60 (91.67%), Query Frame = 0
Query:    1 MPEKTLKKEALSTNEMNSVGAITYQVTNGKNAMPAFGGRLSDVDITDVANFVLSQSDNDW 60
            MPEKTLKKEALS N+M+SV AITYQVTNGKNAMPAFGGRL++ DI DVANFVLSQSD +W
Sbjct:   50 MPEKTLKKEALSQNKMDSVSAITYQVTNGKNAMPAFGGRLAESDIEDVANFVLSQSDKNW 109          
BLAST of mRNA_H-elongata_contig189860.5230.1 vs. uniprot
Match: A0A141BSB7_9PHAE (Cytochrome c6 n=9 Tax=Sargassum TaxID=3015 RepID=A0A141BSB7_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.840e-27
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 0
Query:    1 MPEKTLKKEALSTNEMNSVGAITYQVTNGKNAMPAFGGRLSDVDITDVANFVLSQSDNDW 60
            MPEKTL+K ALSTN+MNS GAITYQVTNGKNAMPAFGGRLSD DI DVA FVLS+S+ DW
Sbjct:   55 MPEKTLQKGALSTNQMNSPGAITYQVTNGKNAMPAFGGRLSDDDIKDVAGFVLSKSERDW 114          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig189860.5230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JZT7_9PHAE3.150e-3086.67Cytochrome c6 n=1 Tax=Desmarestia aculeata TaxID=6... [more]
A0A120HY83_9PHAE6.350e-3086.89Cytochrome c6 n=6 Tax=Sargassum TaxID=3015 RepID=A... [more]
A0A8E5XRM0_9PHAE1.280e-2985.00Cytochrome c6 n=1 Tax=Ishige okamurae TaxID=233772... [more]
A0A2R4QPS7_9PHAE2.580e-2985.25Cytochrome c6 n=3 Tax=Fucaceae TaxID=3010 RepID=A0... [more]
A0A8F0JYE6_9PHAE4.270e-2881.97Cytochrome c6 n=1 Tax=Protohalopteris sp. TaxID=28... [more]
A0A8F0F8D4_9PHAE4.390e-2881.67Cytochrome c6 n=4 Tax=Alariaceae TaxID=2887 RepID=... [more]
A0A6B7EVB8_9PHAE5.890e-2883.33Cytochrome c6 n=3 Tax=Ectocarpales TaxID=2877 RepI... [more]
A0A5A4MJ73_9PHAE1.220e-2783.61Cytochrome c6 n=5 Tax=Scytosiphonaceae TaxID=2891 ... [more]
A0A0S0GBE4_COSCS1.220e-2783.33Cytochrome c6 n=20 Tax=Laminariales TaxID=2886 Rep... [more]
A0A141BSB7_9PHAE2.840e-2783.33Cytochrome c6 n=9 Tax=Sargassum TaxID=3015 RepID=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009056Cytochrome c-like domainPFAMPF13442Cytochrome_CBB3coord: 18..52
e-value: 2.8E-7
score: 30.8
IPR036909Cytochrome c-like domain superfamilyGENE3D1.10.760.10coord: 1..61
e-value: 4.9E-21
score: 77.1
IPR036909Cytochrome c-like domain superfamilySUPERFAMILY46626Cytochrome ccoord: 16..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig189860contigH-elongata_contig189860:265..450 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig189860.5230.1mRNA_H-elongata_contig189860.5230.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig189860 118..450 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig189860.5230.1 ID=prot_H-elongata_contig189860.5230.1|Name=mRNA_H-elongata_contig189860.5230.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp
MPEKTLKKEALSTNEMNSVGAITYQVTNGKNAMPAFGGRLSDVDITDVAN
FVLSQSDNDWN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009056Cyt_c-like_dom
IPR036909Cyt_c-like_dom_sf