prot_H-elongata_contig18959.5215.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18959.5215.1
Unique Nameprot_H-elongata_contig18959.5215.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length99
Homology
[Close]
BLAST of mRNA_H-elongata_contig18959.5215.1 vs. uniprot
Match: A0A6H5JYL2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL2_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.970e-12
Identity = 34/53 (64.15%), Postives = 47/53 (88.68%), Query Frame = 0 
Query:   49 DAQGMDEIR--RFYRVVFETRQLGLVLVKQDGVAVVEDVTAYNGVGGRSAGPF 99
            + +G ++I+  RFY VVFET QLG+VL++Q+GVAVVE+V++YNGVGGR+AGPF
Sbjct: 3378 EEEGGEQIQDGRFYEVVFETAQLGIVLLRQNGVAVVEEVSSYNGVGGRAAGPF 3430
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18959.5215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JYL2_9PHAE1.970e-1264.15FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18959contigH-elongata_contig18959:1272..4167 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18959.5215.1mRNA_H-elongata_contig18959.5215.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18959 1272..4167 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18959.5215.1 ID=prot_H-elongata_contig18959.5215.1|Name=mRNA_H-elongata_contig18959.5215.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MGREASTGTRLQPRGEREALESAASMDEPSLGSGEDEGGSSRSTKEGLDA
QGMDEIRRFYRVVFETRQLGLVLVKQDGVAVVEDVTAYNGVGGRSAGPF
back to top