prot_H-elongata_contig189424.5202.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig189424.5202.1
Unique Nameprot_H-elongata_contig189424.5202.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
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BLAST of mRNA_H-elongata_contig189424.5202.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.040e-6
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = 0 
Query:    5 IRTSKTNLS-FFLEVETAVEVYREVMEEKELGRALNPIKRISVFLDPRRKMMSEIDCIGGGNALQTMAISDVE 76
            I T +T ++   LE +  V+V RE+M+EK +G+AL  ++R+SV LDPRRK + +     G + L+T A +D++
Sbjct:  359 ISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLK 431
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig189424.5202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JQI6_9PHAE1.040e-639.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig189424contigH-elongata_contig189424:625..990 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig189424.5202.1mRNA_H-elongata_contig189424.5202.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig189424 397..990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig189424.5202.1 ID=prot_H-elongata_contig189424.5202.1|Name=mRNA_H-elongata_contig189424.5202.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
MDPVIRTSKTNLSFFLEVETAVEVYREVMEEKELGRALNPIKRISVFLDP
RRKMMSEIDCIGGGNALQTMAISDVEELGHYFVALRQELTNYRGQNVETD
VCGFSLLGFWLRKSKPTLAQGT
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