mRNA_H-elongata_contig18924.5196.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18924.5196.1
Unique NamemRNA_H-elongata_contig18924.5196.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig18924.5196.1 vs. uniprot
Match: D8LN21_ECTSI (Threonine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN21_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 1.700e-71
Identity = 113/132 (85.61%), Postives = 121/132 (91.67%), Query Frame = 1 
Query:   13 VKFLGNLFEYFLLRRRARGEDARITILGATSGDTGSAAIYGLRGKEHVDCFIMFPEGRVSAIQERQMTTVPDANIQCISLSNSSFDDCQAIVKEAFADKPFREEVKLGAVNSINWGRVLGQMTYYFWAHFRV 408
            ++FLGNLFEYFLLRRRA+GE+A +TILGATSGDTGSAAIYGLRGK HV+CFIMFPEGRVS IQERQMTTVPDANI C+S+  S FDDCQ IVK AFADKPFREEVKLGAVNSINW RVL QMTYYFWAHFRV
Sbjct:  130 LQFLGNLFEYFLLRRRAKGEEAGLTILGATSGDTGSAAIYGLRGKAHVNCFIMFPEGRVSEIQERQMTTVPDANIHCVSVEGS-FDDCQDIVKAAFADKPFREEVKLGAVNSINWARVLAQMTYYFWAHFRV 260
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BLAST of mRNA_H-elongata_contig18924.5196.1 vs. uniprot
Match: A0A835Z4E7_9STRA (Threonine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4E7_9STRA)

HSP 1 Score: 215 bits (548), Expect = 5.330e-65
Identity = 105/132 (79.55%), Postives = 116/132 (87.88%), Query Frame = 1 
Query:   13 VKFLGNLFEYFLLRRRARGEDARITILGATSGDTGSAAIYGLRGKEHVDCFIMFPEGRVSAIQERQMTTVPDANIQCISLSNSSFDDCQAIVKEAFADKPFREEVKLGAVNSINWGRVLGQMTYYFWAHFRV 408
            ++FLGNLFE+FL RRRARGE AR+TILGATSGDTGSAAIYG+RGK+H+DCFI+FPEGRVS IQERQMTTV D NI C+S+  S FDDCQAIVK AF DK FRE V LGAVNSINW RVL QMTYYFWA+FRV
Sbjct:  118 LQFLGNLFEFFLERRRARGEQARLTILGATSGDTGSAAIYGMRGKKHMDCFILFPEGRVSQIQERQMTTVEDTNIHCVSVEGS-FDDCQAIVKAAFNDKEFRERVSLGAVNSINWARVLAQMTYYFWAYFRV 248
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BLAST of mRNA_H-elongata_contig18924.5196.1 vs. uniprot
Match: W7TYE5_9STRA (Threonine synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYE5_9STRA)

HSP 1 Score: 190 bits (483), Expect = 5.510e-56
Identity = 94/132 (71.21%), Postives = 111/132 (84.09%), Query Frame = 1 
Query:   13 VKFLGNLFEYFLLRRRARGEDARITILGATSGDTGSAAIYGLRGKEHVDCFIMFPEGRVSAIQERQMTTVPDANIQCISLSNSSFDDCQAIVKEAFADKPFREEVKLGAVNSINWGRVLGQMTYYFWAHFRV 408
            ++ LGNLFEYFL +R   G +A +TILGATSGDTGSAAIYGLRGK +V CFI++P+GR SAIQERQMTTVPD N+QCI++  + FDDCQ IVK AF D  FREEV+LGAVNSINW RVL Q+TYYFWA+FR+
Sbjct:  122 LQLLGNLFEYFLSKRS--GAEAFLTILGATSGDTGSAAIYGLRGKANVRCFILYPKGRTSAIQERQMTTVPDKNVQCIAVEGT-FDDCQNIVKAAFQDASFREEVRLGAVNSINWARVLAQITYYFWAYFRI 250
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BLAST of mRNA_H-elongata_contig18924.5196.1 vs. uniprot
Match: A0A7S2SVW5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVW5_9STRA)

HSP 1 Score: 184 bits (468), Expect = 8.650e-56
Identity = 90/132 (68.18%), Postives = 113/132 (85.61%), Query Frame = 1 
Query:   13 VKFLGNLFEYFLLRRRARGEDARITILGATSGDTGSAAIYGLRGKEHVDCFIMFPEGRVSAIQERQMTTVPDANIQCISLSNSSFDDCQAIVKEAFADKPFREEVKLGAVNSINWGRVLGQMTYYFWAHFRV 408
            ++FLGNLFEYF+ +++  G + R+TI+GATSGDTGSAAIYGLRGK +V+CFI++P+GRVSAIQERQM TVPD+NI C+ +  + FDDCQ IVK AF DK FR+EVKLGAVNSINW RVL Q+TYYF A+++V
Sbjct:  121 LQFLGNLFEYFIGKKQ--GSERRLTIMGATSGDTGSAAIYGLRGKANVNCFILYPKGRVSAIQERQMATVPDSNIHCLCVEGN-FDDCQDIVKGAFMDKSFRDEVKLGAVNSINWARVLAQITYYFHAYYQV 249
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BLAST of mRNA_H-elongata_contig18924.5196.1 vs. uniprot
Match: A0A7S2SVX2_9STRA (Threonine synthase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVX2_9STRA)

HSP 1 Score: 184 bits (468), Expect = 9.670e-55
Identity = 90/132 (68.18%), Postives = 113/132 (85.61%), Query Frame = 1 
Query:   13 VKFLGNLFEYFLLRRRARGEDARITILGATSGDTGSAAIYGLRGKEHVDCFIMFPEGRVSAIQERQMTTVPDANIQCISLSNSSFDDCQAIVKEAFADKPFREEVKLGAVNSINWGRVLGQMTYYFWAHFRV 408
            ++FLGNLFEYF+ +++  G + R+TI+GATSGDTGSAAIYGLRGK +V+CFI++P+GRVSAIQERQM TVPD+NI C+ +  + FDDCQ IVK AF DK FR+EVKLGAVNSINW RVL Q+TYYF A+++V
Sbjct:  121 LQFLGNLFEYFIGKKQ--GSERRLTIMGATSGDTGSAAIYGLRGKANVNCFILYPKGRVSAIQERQMATVPDSNIHCLCVEGN-FDDCQDIVKGAFMDKSFRDEVKLGAVNSINWARVLAQITYYFHAYYQV 249
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BLAST of mRNA_H-elongata_contig18924.5196.1 vs. uniprot
Match: A0A7S2IFR4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IFR4_9STRA)

HSP 1 Score: 186 bits (471), Expect = 5.870e-54
Identity = 93/132 (70.45%), Postives = 106/132 (80.30%), Query Frame = 1 
Query:   13 VKFLGNLFEYFLLRRRARGEDARITILGATSGDTGSAAIYGLRGKEHVDCFIMFPEGRVSAIQERQMTTVPDANIQCISLSNSSFDDCQAIVKEAFADKPFREEVKLGAVNSINWGRVLGQMTYYFWAHFRV 408
            ++ LGN FEYFL        D  ITILGATSGDTGSAAIYGLRGK+ VDC I+FP GRVSAIQERQMTTVPDANI C+++ + +FDDCQ +VK +FADK FRE VKLGAVNSINW RVL Q TYYFW++ RV
Sbjct:  109 LQMLGNFFEYFL---ETGSNDGHITILGATSGDTGSAAIYGLRGKKGVDCVILFPHGRVSAIQERQMTTVPDANIHCVAI-DGTFDDCQDLVKASFADKDFRERVKLGAVNSINWCRVLAQTTYYFWSYLRV 236
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BLAST of mRNA_H-elongata_contig18924.5196.1 vs. uniprot
Match: K8Z048_NANGC (Threonine synthase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z048_NANGC)

HSP 1 Score: 182 bits (461), Expect = 1.830e-53
Identity = 84/132 (63.64%), Postives = 113/132 (85.61%), Query Frame = 1 
Query:   13 VKFLGNLFEYFLLRRRARGEDARITILGATSGDTGSAAIYGLRGKEHVDCFIMFPEGRVSAIQERQMTTVPDANIQCISLSNSSFDDCQAIVKEAFADKPFREEVKLGAVNSINWGRVLGQMTYYFWAHFRV 408
            ++FLGN+FEYF+ +++    D ++T+LGATSGDTGSAAI GLRGK++V+ F+++P+GRVS +QERQMTTV D N+ CI++ N++FDDCQ+I+K AF DK FRE+V LGAVNSINW RVL Q+TYYF+A+FRV
Sbjct:  203 LQFLGNVFEYFMAKKKG-DPDVKLTVLGATSGDTGSAAIEGLRGKKNVNVFVLYPKGRVSEVQERQMTTVLDKNVHCIAVENATFDDCQSIIKSAFQDKEFREKVCLGAVNSINWARVLAQVTYYFFAYFRV 333
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BLAST of mRNA_H-elongata_contig18924.5196.1 vs. uniprot
Match: A0A6T5LU83_HETAK (Threonine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5LU83_HETAK)

HSP 1 Score: 181 bits (459), Expect = 4.520e-52
Identity = 90/132 (68.18%), Postives = 111/132 (84.09%), Query Frame = 1 
Query:   13 VKFLGNLFEYFLLRRRARGEDARITILGATSGDTGSAAIYGLRGKEHVDCFIMFPEGRVSAIQERQMTTVPDANIQCISLSNSSFDDCQAIVKEAFADKPFREEVKLGAVNSINWGRVLGQMTYYFWAHFRV 408
            ++FLGNLFEYFL R+      A++TI+GATSGDTGSAAIYGLRGK++V+CFI+FP G+VS IQERQMTTVPDAN+ C+SL+ + FDD Q IVK +F D  FREEV +GAVNSINW RVL QM+Y+F+A+FRV
Sbjct:  123 LQFLGNLFEYFLGRKPG----AKLTIMGATSGDTGSAAIYGLRGKKNVNCFILFPTGKVSPIQERQMTTVPDANVHCVSLAGT-FDDAQDIVKASFNDAAFREEVSIGAVNSINWARVLAQMSYFFYAYFRV 249
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BLAST of mRNA_H-elongata_contig18924.5196.1 vs. uniprot
Match: A0A7S4SNE2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SNE2_9STRA)

HSP 1 Score: 181 bits (458), Expect = 6.690e-52
Identity = 90/132 (68.18%), Postives = 105/132 (79.55%), Query Frame = 1 
Query:   13 VKFLGNLFEYFLLRRRARGEDARITILGATSGDTGSAAIYGLRGKEHVDCFIMFPEGRVSAIQERQMTTVPDANIQCISLSNSSFDDCQAIVKEAFADKPFREEVKLGAVNSINWGRVLGQMTYYFWAHFRV 408
            ++ LGN FEYFL   +    D  +TILGATSGDTGSAAIYGLRGK+ VDC I+FP GRVSAIQERQMTTVPD+NI C+++ + +FDDCQ IVK +F D  FRE VKLGAVNSINW RVL Q TYYFW++ RV
Sbjct:  124 LQMLGNFFEYFL---QTGSNDGHLTILGATSGDTGSAAIYGLRGKKGVDCVILFPHGRVSAIQERQMTTVPDSNIHCVAV-DGTFDDCQDIVKASFGDADFRERVKLGAVNSINWCRVLAQTTYYFWSYLRV 251
[Close]
BLAST of mRNA_H-elongata_contig18924.5196.1 vs. uniprot
Match: A0A7S1Z2C3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2C3_TRICV)

HSP 1 Score: 179 bits (453), Expect = 3.380e-51
Identity = 90/132 (68.18%), Postives = 105/132 (79.55%), Query Frame = 1 
Query:   13 VKFLGNLFEYFLLRRRARGEDARITILGATSGDTGSAAIYGLRGKEHVDCFIMFPEGRVSAIQERQMTTVPDANIQCISLSNSSFDDCQAIVKEAFADKPFREEVKLGAVNSINWGRVLGQMTYYFWAHFRV 408
            ++ LGN FEYFL      G   R+T+LGATSGDTGSAAIYGLRGK+ VDC I++PEGRVSAIQERQMTTVPD NI C+++  + FDDCQ +VK +FAD  FRE VKLGAVNSINW RVL Q TYYFW++ RV
Sbjct:  153 LQMLGNFFEYFLSTGSNGG---RLTVLGATSGDTGSAAIYGLRGKKGVDCVILYPEGRVSAIQERQMTTVPDDNIHCVAVEGT-FDDCQDLVKASFADAAFRERVKLGAVNSINWCRVLAQTTYYFWSYLRV 280
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18924.5196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN21_ECTSI1.700e-7185.61Threonine synthase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835Z4E7_9STRA5.330e-6579.55Threonine synthase n=1 Tax=Tribonema minus TaxID=3... [more]
W7TYE5_9STRA5.510e-5671.21Threonine synthase n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A7S2SVW5_9STRA8.650e-5668.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SVX2_9STRA9.670e-5568.18Threonine synthase (Fragment) n=1 Tax=Rhizochromul... [more]
A0A7S2IFR4_9STRA5.870e-5470.45Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
K8Z048_NANGC1.830e-5363.64Threonine synthase (Fragment) n=1 Tax=Nannochlorop... [more]
A0A6T5LU83_HETAK4.520e-5268.18Threonine synthase n=1 Tax=Heterosigma akashiwo Ta... [more]
A0A7S4SNE2_9STRA6.690e-5268.18Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1Z2C3_TRICV3.380e-5168.18Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18924contigH-elongata_contig18924:268..7143 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score232.6
Seed ortholog evalue1.1e-58
Seed eggNOG ortholog2880.D8LN21
Preferred nameTHR4
KEGG rclassRC00017,RC00526
KEGG koko:K01733
KEGG ReactionR01466,R05086
KEGG Pathwayko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230
KEGG ModuleM00018
GOsGO:0003674,GO:0003824,GO:0004795,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006082,GO:0006520,GO:0006566,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016311,GO:0016829,GO:0016835,GO:0016838,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.2-oxobutyrate metabolic process
EggNOG OGsCOG0498@1,KOG2616@2759
EC4.2.3.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size408
Cds size408
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18924.5196.1prot_H-elongata_contig18924.5196.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18924 268..7143 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930081.615621-CDS-H-elongata_contig18924:267..3821622930081.615621-CDS-H-elongata_contig18924:267..382Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18924 268..382 +
1691679273.6747193-CDS-H-elongata_contig18924:267..3821691679273.6747193-CDS-H-elongata_contig18924:267..382Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18924 268..382 +
1622930081.629892-CDS-H-elongata_contig18924:6312..65141622930081.629892-CDS-H-elongata_contig18924:6312..6514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18924 6313..6514 +
1691679273.6877985-CDS-H-elongata_contig18924:6312..65141691679273.6877985-CDS-H-elongata_contig18924:6312..6514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18924 6313..6514 +
1622930081.642436-CDS-H-elongata_contig18924:7052..71431622930081.642436-CDS-H-elongata_contig18924:7052..7143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18924 7053..7143 +
1691679273.6971226-CDS-H-elongata_contig18924:7052..71431691679273.6971226-CDS-H-elongata_contig18924:7052..7143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18924 7053..7143 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18924.5196.1

>prot_H-elongata_contig18924.5196.1 ID=prot_H-elongata_contig18924.5196.1|Name=mRNA_H-elongata_contig18924.5196.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MLPPVKFLGNLFEYFLLRRRARGEDARITILGATSGDTGSAAIYGLRGKE
HVDCFIMFPEGRVSAIQERQMTTVPDANIQCISLSNSSFDDCQAIVKEAF
ADKPFREEVKLGAVNSINWGRVLGQMTYYFWAHFRV
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mRNA from alignment at H-elongata_contig18924:268..7143+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18924.5196.1 ID=mRNA_H-elongata_contig18924.5196.1|Name=mRNA_H-elongata_contig18924.5196.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6876bp|location=Sequence derived from alignment at H-elongata_contig18924:268..7143+ (Himanthalia elongata Himel1 dioecious)
ATGCTACCGCCCGTGAAGTTTTTAGGAAACCTGTTCGAGTACTTTTTGCT
GCGTCGACGGGCGAGAGGAGAGGACGCGAGAATCACGATACTTGGGGCGA
CGTCTGGGGACACGGGTGAGGTTCCCCGATGACGAGGTCAAGAGATACAA
GATGCCTCGTTTGCCCTTCCCCCCCATCCCCGGGTGGGTTATATCCAATA
GCATATAATCGCTAGCATTACAGGGACATATTACGCACTTGTGTTCAATT
TAATTAATACATATATGCGTACACACACTTACAAACACGACATATACCTG
CCCCCCCCCACATACATGCAACACATACAGACACAAACACGCGCACACCG
TTTTCGTGGATGTTGAGAAAACGGGATTGCGGATGAAACGCAACTTGATT
CTGGAGGGAGAATGAATGAGCCATTATTTTAACTTTATGTGAGCGGTTTG
ACCCTTTGAGTCCCCGGTACTGTGAAATCAGACCAGCAAACCAGACTACA
GGGTTGAAAAATAGAGCGGAACTTTTTATTTTGCTCCTCGTTGGCCCATC
GACTCTAAAACGGTCGAAAACATGAAATAAACGGTCGAAAAAGCAGTACA
GTACTGTATTAATAACATCAGCTTGAAAATATAAGCAAATACTGAAAAAC
AAACGAGAATAGGTCACACGTGCCTATACCTGTCTACAGAGAAAAAGCGA
ATTACACTCCGCGTATTGTTTGGGGAAATTCACAACTAACTGGTGACTGG
TGACTGGTGTCCAGCGAGCTATTATGGCTAACGGTCTCAATATATTTTAC
TCGAGTATTCTGACTAGCGACTGTTGTAAAGAATAGTCCTCGAAATAATC
CTATTCGTCACGACTTGATATAACCTCTCTGTGTTGAAAATTCCCCCTGC
CCTTCCCTTGCCCCACTATGTCCGATATCAGTGTTCCGATATCAGTGTTC
CCACCCATGGGCACAAAAACGCTTCACTAATGAAATTAGGTCCACCACGG
AGAGATCCTAAAGCCGTTTCTTGCTCCCCCCCTTCTACAGTTACATACAT
ATATTTATTTAATTCTAGAAGAAAACATTTACTCATCAGCCTGCCGTCTT
TTCCCTCGATGGTCGTACACGCAACAGTGACGAGTTACCCCACTCATAAT
CGCGATGACTGACGGAGTACGCTATGCCTTCAGGGTTTCCGTAATGTGCT
ATTAGCATTAATACCACAGACAGTGTCACACCGCGTTTTCTTCCGTGACA
ATACTAAAAACAAGACAACAAGACGAGGCTGATAAAATAACATACTCGGG
TTATTTTTGTTGAAGGCGCCCTTGCCTCATGCTCGTCACTTTTGCAATAA
AACACCCGCTCTTAATGTTCCTTGCCTTCAAGTTACTGTCGCTCGAAAAC
GACTCGTTCGAGCATGTTTGGACCTCCTGCCCTCGATGTCTACTGTCAAT
GGTGGAAATGAGTGCTCTGTGTAGGCACATGAAATATTTATATTACTGCG
TTTGGTTGATCTCCCCTCCCCGTTCAATAGCCGCATCAGCATCTTTAGTG
AAGTGAACTGTCTGGATTTGTTTACCTATATTCGGATTGTTAGGCCATAT
TTTATCTTTCACCTTTTTATTTGATCGGATTTATGGATCTGGACTATTTT
TTTCTTGAAAAAAACTTGAACTCATTTCAACCCTCCGAACATTCCACCGT
GGGAGGTGCAATCCAGAGTTTGGATCTGGTGCTTTTCGCTAAGACTTCAA
AATCTGGAGCCCAAATCCAAATGTTTATTTTATAGGAGATTTGAATAAAC
GTGAAATATATTTACAACGATTTGAACGGCGTGTGTGCATTGTTCTAGCC
GTATTTTTTCCATACAGTAGTAGTAGAACACAGCGGGGCGCTACGGCAGC
AGGTAGCAGCAGCACGACAGCTTGAGAGTGTGGTCCATCATATAAAGAGC
AACCATCGCCATCATGGCTGAATCTATTGTTTTCGCAAGAAACGATACGA
TACTATACGATATAATAAGATACGATACGATACTATATAATAAGATACGA
TAAATAATATAAGATACGATAGGCGGTACAGTATCTTCGTTGGTGTCTGG
AGAGGTTAGGAAATACCTCCGCACAAAAAAACACAAAATCCTTACCTACC
CTCCAGGGCCGAGCAGTAAACTATACTATAAACTATACTATACTGATCTA
GGTGTAAAGCGCGACACCGAAATGAGGAATGACCGCCGCCCGGGAGAAGA
GAAAATCAGCCCATAGCCCACAGCCGAAAGTATTTCGCCGGCCGTGTATG
GGAGGAAATGACGTTCAACTCGTCACGGAAGTTCCGGCGGCAGCAGCGAA
GAACAAGGCCCGAAGCTTGCGTTGAGCGTCTCGAGGCTCCGCCACCTCCC
TGAGCTCTTTCAGAAGAGCGATCTCCTCCATCAGACAAGTGATTTCATGG
TGTCTCTTTCATCCAGGCTTCTTTCTGAGCTGGCCGTAACAAATTGATGG
GTGGGGGGATGGTAAGCTAGAGGAGCAAGCACTTGGTCTTTTGCGCCACG
CAATTCAACCGATTACTCTCCGGCGTTTTTAGAGGGCGTGACGTTATCAG
GTACGGTACTCATTCCGGTACTCATTCCGGTACTCATTCCGATACTCATT
CCGATACTCATTCCGGTACTCATTCCGGTACTCATTCCGGTACTCATTCC
GGTACTCATTCCGATACTCATTCCGGTACTCATTCCGGTACTCATTCCGA
TACTCATTCCGAAGCGAGGAAGAAGATGGAGAGACGAAAAATCTCGTACT
TTTAAGTAGTTTTAAAGGACTTGGTCCCTTGTTGCGCTTGCGGTCTCCTT
TATCAGATTATGTACGAGCTCACGATGTGTACGTACGAAGAGATTTTCGG
AAAGGTTGGGGAACCTTACCTCGCCGCTCTCGATGCTCTGGTCGCCTAAG
ACGATGATTTAATGGGTAATATACAAGGGAAACTCGCACATAGTGGAGAC
GCTCTTAGATTCGACACTTCTATTATAAACATCTCACCCTTTGATACCCC
TTGCCCACCGGTAGATAGTTGTCCCTTCACTCGATCAATGTGTCATTCTC
GCATCTCACATGGCACGTCCGATCCTTGTCTCGGGTGACCTCATGAGTTT
GTTGCACGGCGGCGTCATACCGGATGCTAACCTTGTGATTTTGCGTCCCG
TGAAAGCTCTTGCTGTAGGAAATAATGCTCCCAGCGTGGTCTACCGTTGC
CTGGTTGTTGTTGTTGTTGGTCACACATTTCGCAGAAGATCAACTGGATT
TGGTTGCTTTTTGCTCGTGGTCAGCTGAACAGGAAAAATAATTATCTCCT
GTCCCCGTTGGCGCCTGAAAATTTGGTTTCGTGAAACGGGTTCAGCAGTC
CCATCCCGCGTCAGCCTACTCATTCTCCCAACCCAGGCTGAATCTGGTGC
GTACTCCCGGGATTCTCTCAATCCTCCCGTTTTCCGCGACGGCGTCCATT
TCTACCGTCAACTGCCATCGGGTCAATCCCTATTTTATCAGGCCACGCAA
TTGCGCACCGATGTCGTTTACCACCGAGAGTCCACCGGCACTGAGCCAGC
AATCCTCAAGGTAGCTCGAATAACTGGTGAAGCCTATTCAGGTAACCCCA
TGAACCAATTATTGTACGCCTCTATTTTCCCACACCCACTATGGGATCTG
GTTGAGGCGCGATGGCAGCAGTCCCATTTGATATGTGTCAGGTCAGTGGA
GCCCATCGCATCGCGCTTCTACCCCCCACTTTCTCTTGAGCAGCCCCGAT
CGGGAAGTGGATGTGGTCATCGTACAGCTCCTCGACGAAGTGCTTGCAGA
AGACGTGAAAACATGTGCACACTACAGCCTCGCTCATGAACAAGAGCTGG
GGCGTGTCGCCAAAGCAAATACCTCTCCCGAGGGTCTACAACGCTGTTAA
ATTCCTTCTGGTGTTCACGCGTACGATGCATTGATAACAACCTCGACTAC
AAAATAACAGTAGGACACAGCAAGATGGATGGACAATGCAACACTTCGGC
GTACAGTGCTGCTACGCATACGGTACTGATAATGGCAAGTTGCCGCCAAC
CGCTTTTCAGTTTTCAGTGAATTAAAGATACTTCTTGTACTGCCTTCAAT
TTGGCGGAAATCGTGTCAACACCGACATATCCAACCCTAAAGCTTGAATC
AATTACAGAGATAGATGTTACAACATCGCAGAACTCGTCCTTCAGGTTTA
AAACCAATGGTACGACCTGTATTGTATACAATGCAGTATGATTTACTGTC
CACTGCTTCGGAGTCATCTTGAACCCAAGCCATATATCATCGTACCGCAC
CTACCTCGCACCGTTCATGGCAGAATCAGCTGGGTCTACTGTCCGTCCGT
GGAGTCATCTCGAACTCAACCCGTACACCGTCGTACCACACCTACCACAT
ATCGCCTATGACGTAATCAGCAACAACTTCTGCTGAGCTTCGACTCCACA
AATATGCACTGCTTCCCTGTCCACGTCTCTTGCAGCCAATGAAAACGCCT
TTTTCTGCTTTCTCAATGAAAACCACAAGCTCCAATAAAAAAAATCACAC
GGGATGCGGAAGCGCCTCCGAAAGTTTCTTAGCCGCTTTTGAGTCGCGGC
GTTCCAGCTCTGCTTTTCCTGAGCATTATAGACCACGTCGCGTGGGAAAA
ATCTGATCGTGGGTAGACTTGCCGAGGGCCCTTGACGCGGGGACCATCGC
CATCCTCGCTCTGTTCCCACTTGGTCCTTTCCGTGTCCTCTAGCACGTCC
AGAACTATATCCCACTCGGCCAGCGTCCTGGCTTGGCGCCGTTTCTTGTA
GGTAAGGAACGCCGCCAGATTGACAGTCAGCGCTCCTCTGGCGTGTTCAT
GGCAGTCGTCTGACGCCATGGAGCTCACCAACGTGCTGGGGAGATGCTCT
CGATGCTGCATGCCGCGGGTAACCCTCTCTGCTTTAGTAAGGGCTCAAGG
TGTCCACACCGTGCAGTTATGTCGGATGGTGACTTCGTTATACTTCTAGA
GGCAAACGCCTAGATACGTCAATTCGAAAACAGCAAATACGATCGCTTCG
CAGCTCGCTCGGATGTGGGCCCTAAATACCATCGAGTCGAGGGCCAAAAT
ATATGATCGTATTTGAGATTATCGTATTTGGCTAAACGCCATTTTTCCAT
AAAATAGGACTTTCGGATTTTGGGGTCCCGAAAATTCCAGATCCAAATCC
AAAAATATTAAATATGACGCCCCATAAAATATAGTTAAGGGCGTTTTCGT
ATCTAGCATATATATATATATATATATATATATATATAATTCTAACTCCC
TATTATTTGTTTTGCTTGGCTATCGTAGAATCTTCCTCTGCTCTATCCGA
CAACCAAGGACACAAGCCTTAGCCTTTCGTCTTTCGGGTGAAAATTCAGA
GACGACTGCATGTAGGCAATTTTTCTCCAGCAGAACAATCTGCATCAGAC
CAAGCAACGGTCGATCGTCAATCAGCCTTATGAGAGAAGCGAAGTATGTA
CAGTAATCGTATAAATCTGTCTCGTGTGAACAGAAGAAAAAAAAAAAATC
ATGAAAAAAGGCTTGCCTTCAATTTGGGAAATTCCATCTCATTTCGAGAT
AATTTTACTCAGTCTGATCTTGTGGAAATATGATGAATGATTAGACCCGC
CCGTTTAACTCGAGTTCCCAAGAGGTCAGTGGGTAGAAGCGGGACTGGGC
GGGGTGCGAGGCGCAATCTCGTGTTTAACTCTAGAACGCCGTCTGGGACA
CAGTCCAAACCCTGGTTTGTGCGCGGTTGTATTATTTGCGGCATTCAGCG
GCTTCCGCAGCGGATGGAAATAATATTAACATAAATCCCATCCCCTCCCC
TCTCCCATGCCGTTTTTTAATACGAAAACCAGGCGTTTGATAAAAACGCA
GGGCCAAATAAATGCCTTCCTTCAAAATTGTTTTCCCGATGCCACTGCTA
GCTTCGTTGGTGAAGATGGGTGATCGCTCGTCGTTGCCATGTCAGGCTCG
GCGGCCATCTACGGGCTCCGGGGCAAGGAGCACGTGGACTGCTTCATCAT
GTTTCCGGAGGGTCGAGTAAGCGCGATCCAAGAACGACAAATGACCACAG
TGCCCGACGCCAACATCCAATGCATCAGCCTCTCTAATAGTTCGTTTGAC
GACTGCCAGGCCATCGTCAAAGAGGCGTTCGCCGACAAGCCCTTCAGGTG
CTTAGACTTAAGTCTTAGGCTTGGGCTTCGCGATATGACTGGCACAGCCA
GCCGTTATTTTCCCTTTTGCTTGACACTCCTTGTCATAGAGAAAAACGTT
TGAAGTATGCTGTGACAGCCAGGAAAATATGGTAGCTGTAGAGCGGGGAC
GGGGACGGGGGGGGTGAGATTAAGTGTCCTGAGAAGGCCAAAACTGATGT
AGAAAAGATAGGGAAAACATGTTTGCTTCACTTTTGGCAAAAATATAGAG
GAGCGATCGTCCATCGGCGATGGATTATGTAGGAATCCCTCCCGAGGACG
CGTGGTCGGTGGTCTAGCAGCTGAGGCATGCAAATCTTGAGTAACTCCCC
CCGTCTTCGTTCCGAGCAAAATCGCTGCGACGGCGCTTGGGTAACTCCCC
CCTACTTCAATTCAGTTGCAGTTTTGCTTTGCCCATTCATAGATCTATAT
ATTTTCCTCTTAATTGGTTTTATTTTATTTTTATGTATATAATATATGTA
TATATGTATCGTGCGTGCTCATATCGTTTTCTTAGGGAGGAAGTGAAGCT
CGGAGCGGTGAATTCCATCAACTGGGGAAGAGTGCTGGGCCAGATGACGT
ACTATTTCTGGGCCCACTTCCGGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig18924:268..7143+

>mRNA_H-elongata_contig18924.5196.1 ID=mRNA_H-elongata_contig18924.5196.1|Name=mRNA_H-elongata_contig18924.5196.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig18924:268..7143+ (Himanthalia elongata Himel1 dioecious)
ATGCTACCGCCCGTGAAGTTTTTAGGAAACCTGTTCGAGTACTTTTTGCT
GCGTCGACGGGCGAGAGGAGAGGACGCGAGAATCACGATACTTGGGGCGA
CGTCTGGGGACACGGATGCTACCGCCCGTGAAGTTTTTAGGAAACCTGTT
CGAGTACTTTTTGCTGCGTCGACGGGCGAGAGGAGAGGACGCGAGAATCA
CGATACTTGGGGCGACGTCTGGGGACACGGGCTCGGCGGCCATCTACGGG
CTCCGGGGCAAGGAGCACGTGGACTGCTTCATCATGTTTCCGGAGGGTCG
AGTAAGCGCGATCCAAGAACGACAAATGACCACAGTGCCCGACGCCAACA
TCCAATGCATCAGCCTCTCTAATAGTTCGTTTGACGACTGCCAGGCCATC
GTCAAAGAGGCGTTCGCCGACAAGCCCTTCAGGCTCGGCGGCCATCTACG
GGCTCCGGGGCAAGGAGCACGTGGACTGCTTCATCATGTTTCCGGAGGGT
CGAGTAAGCGCGATCCAAGAACGACAAATGACCACAGTGCCCGACGCCAA
CATCCAATGCATCAGCCTCTCTAATAGTTCGTTTGACGACTGCCAGGCCA
TCGTCAAAGAGGCGTTCGCCGACAAGCCCTTCAGGGAGGAAGTGAAGCTC
GGAGCGGTGAATTCCATCAACTGGGGAAGAGTGCTGGGCCAGATGACGTA
CTATTTCTGGGCCCACTTCCGGGTGGGAGGAAGTGAAGCTCGGAGCGGTG
AATTCCATCAACTGGGGAAGAGTGCTGGGCCAGATGACGTACTATTTCTG
GGCCCACTTCCGGGTG
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