prot_H-elongata_contig189108.5192.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig189108.5192.1
Unique Nameprot_H-elongata_contig189108.5192.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
BLAST of mRNA_H-elongata_contig189108.5192.1 vs. uniprot
Match: A0A6H5L5J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J5_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 8.820e-31
Identity = 73/172 (42.44%), Postives = 96/172 (55.81%), Query Frame = 0
Query:    4 VEALGQRYSQVNTFVYLGSTISSVGDVGPEIKRRTGYAWNCFIKYSRAVYDSPYIAVADKVRFLKAKVLEVMLYGCVTWTLSPGDFDKLREAHREILLRCLNAYISTRAAPDYHMLSYLEVLLRTD-REYIEVVVMKRILHYAGRVARMHDDRLPNIDIPGEMVGGKRKRGQ 174
            V A GQ Y Q + FVYLG  IS+ G    EI  R+  AW CF + S ++YD P      K+R L+A+V+E +LYGC +W+L+   + KL   HR+ L RC+    S R   D   LSY + L++    E IE  V KR L +AG V RM D RLP   + G M GG   RG+
Sbjct:  108 VSAAGQSYKQTDRFVYLGRAISADGKADREITSRSCRAWKCFRRNSASMYDRPRANRPLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGW--SKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMKDSRLPKRMLLGAMAGGVGYRGR 276          
BLAST of mRNA_H-elongata_contig189108.5192.1 vs. uniprot
Match: A0A6H5L5T8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T8_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 3.120e-30
Identity = 73/172 (42.44%), Postives = 97/172 (56.40%), Query Frame = 0
Query:    3 AVEALGQRYSQVNTFVYLGSTISSVGDVGPEIKRRTGYAWNCFIKYSRAVYDSPYIAVADKVRFLKAKVLEVMLYGCVTWTLSPGDFDKLREAHREILLRCLNAYISTRAAPDYHMLSYLEVLLRTD-REYIEVVVMKRILHYAGRVARMHDDRLPNIDIPGEMVGGKRKRG 173
            AV A GQ Y Q + FVYLG TIS+ G    EI  R+  AW C+ + S ++YD        K+R L+A+V+E +LYGC +W+L+   + KL   HR+ L RC+    S R   D   LSY + L++    E IE  V KR L +AG V RM D+RLP   + G M GG   RG
Sbjct:  157 AVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGW--SKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRG 325          
BLAST of mRNA_H-elongata_contig189108.5192.1 vs. uniprot
Match: A0A6H5KG97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG97_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 9.040e-30
Identity = 71/173 (41.04%), Postives = 96/173 (55.49%), Query Frame = 0
Query:    2 VAVEALGQRYSQVNTFVYLGSTISSVGDVGPEIKRRTGYAWNCFIKYSRAVYDSPYIAVADKVRFLKAKVLEVMLYGCVTWTLSPGDFDKLREAHREILLRCLNAYISTRAAPDYHMLSYLEVLLRTD-REYIEVVVMKRILHYAGRVARMHDDRLPNIDIPGEMVGGKRKRG 173
            ++V A GQ Y Q + FVYLG TIS+ G    EI  R+  AW C+ + S ++YD        K+R L+A+V+E +LYGC +W+L+   + KL   HR+ L RC+    S R   D   LSY +VL++    E IE    KR L + G V RM D RLP   + G M GG   RG
Sbjct:   72 MSVTAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGW--SKRKRSD-RPLSYAQVLIQAGCEETIEATARKRRLCFVGFVMRMEDSRLPKRMLSGAMAGGAGYRG 241          
BLAST of mRNA_H-elongata_contig189108.5192.1 vs. uniprot
Match: A0A6H5JZD4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZD4_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.050e-29
Identity = 73/171 (42.69%), Postives = 97/171 (56.73%), Query Frame = 0
Query:    4 VEALGQRYSQVNTFVYLGSTISSVGDVGPEIKRRTGYAWNCFIKYSRAVYDSPYIAVADKVRFLKAKVLEVMLYGCVTWTLSPGDFDKLREAHREILLRCLNAYISTRAAPDYHMLSYLEVLLRTD-REYIEVVVMKRILHYAGRVARMHDDRLPNIDIPGEMVGGKRKRG 173
            V A GQ Y Q + FVYLG TIS+ G    EI  R+  AW C+ + S ++YD        K+R L+A+V+E +LYGC +W+L+   + KL E HR+ L RC+    S R   D   LSY + L++    E IE  V KR L +AG V RM D+RLP   + G M GG   RG
Sbjct:  402 VSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTTEHYAKLNETHRQFLTRCIGW--SKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRG 569          
BLAST of mRNA_H-elongata_contig189108.5192.1 vs. uniprot
Match: A0A6H5L020_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L020_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.180e-29
Identity = 73/171 (42.69%), Postives = 95/171 (55.56%), Query Frame = 0
Query:    4 VEALGQRYSQVNTFVYLGSTISSVGDVGPEIKRRTGYAWNCFIKYSRAVYDSPYIAVADKVRFLKAKVLEVMLYGCVTWTLSPGDFDKLREAHREILLRCLNAYISTRAAPDYHMLSYLEVLLRTD-REYIEVVVMKRILHYAGRVARMHDDRLPNIDIPGEMVGGKRKRG 173
            V A GQ Y Q + FVYLG TIS+ G V  EI  RT  AW C+ + S ++YD        K+R L+A+V+E +LYGC +W+L+   + KL   HR+ L RC+    S R   D   LSY + L++    E IE  V KR L + G V RM D RLP   + G M GG   RG
Sbjct:  545 VSAAGQTYKQTDRFVYLGRTISADGKVDREITSRTCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGW--SKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFVGFVVRMEDSRLPKRMLSGAMAGGVGYRG 712          
BLAST of mRNA_H-elongata_contig189108.5192.1 vs. uniprot
Match: A0A6H5K5W0_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W0_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 3.300e-29
Identity = 71/171 (41.52%), Postives = 94/171 (54.97%), Query Frame = 0
Query:    4 VEALGQRYSQVNTFVYLGSTISSVGDVGPEIKRRTGYAWNCFIKYSRAVYDSPYIAVADKVRFLKAKVLEVMLYGCVTWTLSPGDFDKLREAHREILLRCLNAYISTRAAPDYHMLSYLEVLLRTD-REYIEVVVMKRILHYAGRVARMHDDRLPNIDIPGEMVGGKRKRG 173
            V A GQ Y Q + FVYL  TIS+ G    EI  R+  AW C+ + S ++YD        K+R L+A+V+E +LYGC +W+L+   + KL   HR+ L RC+    S R   D   LSY + L++    E IE  V KR L +AG V RM D RLP   + G M GG   RG
Sbjct:   38 VSAAGQTYKQTDRFVYLERTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAEVVEHLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGW--SKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRG 205          
BLAST of mRNA_H-elongata_contig189108.5192.1 vs. uniprot
Match: A0A6H5JCS2_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS2_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 3.640e-29
Identity = 71/171 (41.52%), Postives = 94/171 (54.97%), Query Frame = 0
Query:    4 VEALGQRYSQVNTFVYLGSTISSVGDVGPEIKRRTGYAWNCFIKYSRAVYDSPYIAVADKVRFLKAKVLEVMLYGCVTWTLSPGDFDKLREAHREILLRCLNAYISTRAAPDYHMLSYLEVLLRTD-REYIEVVVMKRILHYAGRVARMHDDRLPNIDIPGEMVGGKRKRG 173
            V A GQ Y Q + FVYLG  IS+ G    EI  R+  AW C+ + S ++YD        K+R L+A+V+E +LYGC +W+L+   + KL   HR+ L RC+    S R   D   LSY + L++    E IE  V KR L +AG V RM D RLP   + G M GG   RG
Sbjct:   57 VSAAGQTYKQTDRFVYLGRIISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGW--SKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRG 224          
BLAST of mRNA_H-elongata_contig189108.5192.1 vs. uniprot
Match: A0A6H5KL25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL25_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 4.950e-29
Identity = 71/171 (41.52%), Postives = 94/171 (54.97%), Query Frame = 0
Query:    4 VEALGQRYSQVNTFVYLGSTISSVGDVGPEIKRRTGYAWNCFIKYSRAVYDSPYIAVADKVRFLKAKVLEVMLYGCVTWTLSPGDFDKLREAHREILLRCLNAYISTRAAPDYHMLSYLEVLLRTD-REYIEVVVMKRILHYAGRVARMHDDRLPNIDIPGEMVGGKRKRG 173
            V A GQ Y Q + FVYLG TIS+ G    EI  R+  AW C+ + S ++YD        K+R L+A+V+E +LYGC +W+L+   + KL   HR+ L RC+    S R   D   LSY + L++    E IE  + KR L  AG V  M D RLP   +PG M GG   RG
Sbjct:  395 VSAAGQTYKQTDRFVYLGRTISADGKADREITSRSYRAWKCYRRNSASMYDRRRANCQVKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGW--SKRKRSD-RPLSYAQALIQAGCEENIEATMRKRRLRLAGFVMPMEDSRLPKRMLPGAMAGGVGYRG 562          
BLAST of mRNA_H-elongata_contig189108.5192.1 vs. uniprot
Match: A0A6H5JPY3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY3_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 5.440e-29
Identity = 71/171 (41.52%), Postives = 94/171 (54.97%), Query Frame = 0
Query:    4 VEALGQRYSQVNTFVYLGSTISSVGDVGPEIKRRTGYAWNCFIKYSRAVYDSPYIAVADKVRFLKAKVLEVMLYGCVTWTLSPGDFDKLREAHREILLRCLNAYISTRAAPDYHMLSYLEVLLRTD-REYIEVVVMKRILHYAGRVARMHDDRLPNIDIPGEMVGGKRKRG 173
            V A GQ Y Q + FVYLG TIS+ G    EI  R+  AW C+ + S ++YD        K+R L+A+V+E +LYGC +W+L+   + KL   HR+ L RC+    S R   D   LSY + L++    E IE  V KR L +AG V RM D RLP   +   M GG   RG
Sbjct:   57 VSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGW--SKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLRAMAGGVGYRG 224          
BLAST of mRNA_H-elongata_contig189108.5192.1 vs. uniprot
Match: A0A6H5L7Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y9_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 7.070e-29
Identity = 67/165 (40.61%), Postives = 92/165 (55.76%), Query Frame = 0
Query:    4 VEALGQRYSQVNTFVYLGSTISSVGDVGPEIKRRTGYAWNCFIKYSRAVYDSPYIAVADKVRFLKAKVLEVMLYGCVTWTLSPGDFDKLREAHREILLRCLNAYISTRAAPDYHMLSYLEVLLRTD-REYIEVVVMKRILHYAGRVARMHDDRLPNIDIPGEMVG 167
            V A GQ Y Q + FVYLG TIS+ G    EI  R+  AW C+ + S ++YD   +    K+R L+A+V+E +LYGC +W+L+   + KL   HR+ L RC+    S R   D   LS+   L++    E IE  V KR L +AG V  M D+RLP   + G M G
Sbjct:   28 VSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRKSASMYDRRRVDRKLKIRLLQAEVVETLLYGCASWSLTAEHYTKLIGTHRQFLTRCIGW--SKRKRSD-RPLSFARALIQAGCEETIEATVRKRRLCFAGFVMCMEDNRLPKRTLSGAMAG 189          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig189108.5192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5J5_9PHAE8.820e-3142.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5T8_9PHAE3.120e-3042.44Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KG97_9PHAE9.040e-3041.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZD4_9PHAE1.050e-2942.69Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L020_9PHAE1.180e-2942.69Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K5W0_9PHAE3.300e-2941.52Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCS2_9PHAE3.640e-2941.52Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KL25_9PHAE4.950e-2941.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPY3_9PHAE5.440e-2941.52Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L7Y9_9PHAE7.070e-2940.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 8..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig189108contigH-elongata_contig189108:605..1144 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig189108.5192.1mRNA_H-elongata_contig189108.5192.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig189108 605..1144 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig189108.5192.1 ID=prot_H-elongata_contig189108.5192.1|Name=mRNA_H-elongata_contig189108.5192.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
AVAVEALGQRYSQVNTFVYLGSTISSVGDVGPEIKRRTGYAWNCFIKYSR
AVYDSPYIAVADKVRFLKAKVLEVMLYGCVTWTLSPGDFDKLREAHREIL
LRCLNAYISTRAAPDYHMLSYLEVLLRTDREYIEVVVMKRILHYAGRVAR
MHDDRLPNIDIPGEMVGGKRKRGQPVKRR*
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