mRNA_H-elongata_contig188951.5187.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig188951.5187.1
Unique NamemRNA_H-elongata_contig188951.5187.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 180 bits (456), Expect = 1.050e-46
Identity = 90/229 (39.30%), Postives = 139/229 (60.70%), Query Frame = 1
Query:   34 EPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
            EP ++ EAQAS EWP+W+K +  E +     G W++ + PK +  +G + VF+RK +K+G++ KYK RLVAQG+ Q+ G+ + E+ +P     SIR +L++     WE  Q+DV  AYL  D++ EIY+  PE + D   ++  L+K +YGL   G  W +K   EL   G++R +ADPCV+ W      V +I V+VDDLL+ + + +  E+  +DL   F + DLGE
Sbjct:  906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGE 1134          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY)

HSP 1 Score: 167 bits (424), Expect = 1.660e-42
Identity = 85/222 (38.29%), Postives = 132/222 (59.46%), Query Frame = 1
Query:   55 AQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
            AQAS EW +W+K +  E +     G W++ + PK +  +G + VF+RK +K+ ++ KYK RLVAQG+ Q+ G+ + E+ +P     SIR +L++     WE  Q+DV  AYL  D++ EIY+  PE + D   ++  L+K +YGL   G  W +K   EL   G++R +ADPCV+ W      V +I V+VDDLL+ + + +  E+  +DL   F + DLGE
Sbjct:  718 AQASPEWSEWEKAVKAEYDQLQGMGTWELQDLPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGCKWNRKLHRELMELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGE 939          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 166 bits (420), Expect = 6.250e-42
Identity = 91/232 (39.22%), Postives = 135/232 (58.19%), Query Frame = 1
Query:   25 LDPEPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
            +D  P ++ EA+AS EW +WKK +  EM      G +   + P G+  +G + VF +K D+DG I +YK RLVAQG+ Q+ G+ Y E+ +P     S+R  L + A    E  Q+DV  AYL  ++E EIY+  PE Y D   +V  L+K +YGL   G  W ++F  +L + GF + +AD CV++ I  G +  +I V+VDDLL+ S T  D  +   +L + F +KDLGE
Sbjct:  875 IDNFPRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRM-TIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGE 1105          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 162 bits (410), Expect = 1.330e-40
Identity = 93/233 (39.91%), Postives = 140/233 (60.09%), Query Frame = 1
Query:   34 EPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQ--VGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILH--GVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
            +P ++ EA  S+EWP+WK+ IA+EM+   + G + +VE PK   ++G++ VF+ K + +G IE YK RLVAQGF QV GI + E+ +P    ASIR++L++ A   WE  Q+DV  AYL  D+E EIY+  P    +  K+  V  LK+ +YGL   G  + KK   EL + G  RS+ D CVF W+ +   V++ +I + VDD  +A  TK       +++ + F + DLGE
Sbjct:  921 DPASLNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFEMSDLGE 1151          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 160 bits (404), Expect = 8.350e-40
Identity = 93/234 (39.74%), Postives = 136/234 (58.12%), Query Frame = 1
Query:   34 EPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWIL--HGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGEASY 729
            +P +  +A +  +  +W+K    E+E     GV++ V RP+ + ++G++ VFK K   DG++EKYK RLVAQGF QV+GI Y E+ +P     SIR++L++ A   WE  Q+DV  A+L  ++E EIY+++P  +  S   V  LKKA+YGL      W KK   EL+  GF R QAD CVF   +  H  ++AV   YVDD +V S +     +   DL S F + DLGE  +
Sbjct:  994 DPLSYVDAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAV---YVDDNMVLSDSLDLVTKTKSDLGSRFDMTDLGEVCW 1224          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A5R9QKQ6_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Labilibacter sediminis TaxID=2570926 RepID=A0A5R9QKQ6_9BACT)

HSP 1 Score: 153 bits (386), Expect = 9.190e-40
Identity = 91/236 (38.56%), Postives = 135/236 (57.20%), Query Frame = 1
Query:   25 LDPEPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDS--RKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVF-RWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGEA 723
            ++ EP T  EA  SSE PQWK+ I  E+E       W++V+ P G   LG R +FKRK+  DG I+KYK RLV +G+RQ +G+ Y ++ SP     SIRMVL++ A    +  Q+DV  A+L  ++E EIY+E PE +  S    +V  L K++YGL      W +KF   +   GF+ ++ D CV+ +   HG V+  + +YVDD+L+  +  +        L S F +KD+G A
Sbjct:   26 VENEPKTYQEAVNSSEGPQWKEAIKSEIESILQNHTWELVDLPPGSKPLGYRWIFKRKMKADGSIDKYKARLVVKGYRQKEGLDYFDTYSPVTRITSIRMVLAIAAIRNLQIHQMDVKTAFLNGELEEEIYMEQPEGFVASGYENKVCKLVKSLYGLKQAPKQWHQKFDQAMMESGFKINECDKCVYVKNTTHGYVI--LCLYVDDMLIIGSNDKMIRSTKDMLKSKFDMKDMGLA 259          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 159 bits (402), Expect = 1.510e-39
Identity = 83/236 (35.17%), Postives = 136/236 (57.63%), Query Frame = 1
Query:   16 ARQLDPE-PTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
            A ++ P+ P T+ +A+ S EW  W+  +  E       G W++ E  + + ++G+R VF +K D+ G++ +YK RLVAQGF Q+ G+ Y ++ SP     ++R  +++ A   WE RQ+D+  AYL  ++E EI++E PE + D   +V  LK  +YGL   G +W KK   +L   GF R+ ADPCV+     G +  ++ V+VDD+++   ++   +  V  L   F +KDLGE
Sbjct:  847 AGEIGPDVPKTLKQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKI-TILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGE 1081          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY)

HSP 1 Score: 157 bits (396), Expect = 2.230e-39
Identity = 90/233 (38.63%), Postives = 138/233 (59.23%), Query Frame = 1
Query:   34 EPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQ--VGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILH--GVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGE 720
            +P ++ EA  S+EWP+WK+ I +EM+   + G + +VE PK   ++G++ VF+ K + +  IE YK RLVAQGF QV GI + E+ +P    ASI ++L++ A   WE  Q+DV  AYL  D+E EIY++ P    +  K+  V  LK+ +YGL   G  + KK   EL + G  RS+ D CVF W+ +   V++ +I + VDD  +A  TK       +++ + F + DLGE
Sbjct:  111 DPASLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFKMSDLGE 341          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: UPI001C988E4D (hypothetical protein n=3 Tax=Bacteria TaxID=2 RepID=UPI001C988E4D)

HSP 1 Score: 150 bits (380), Expect = 4.410e-39
Identity = 87/250 (34.80%), Postives = 144/250 (57.60%), Query Frame = 1
Query:   34 EPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRK--QVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVFRWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGEASY------YRDATSRGTG 759
            +PTT   A    +  +W++ +  EM+   + GVW +V+ P+G   +G + ++KRKI  DG++E YK RLVA+G+ Q +G+ YEE+ SP     SIR++L++ A   +E  Q+DV  A+L  ++E ++Y+E P+ +  S +  +V  LK+++YGL      W  +F   +++ GF ++  +PCV++    G  V  +V+YVDD+L+              L S F +KDLGEA+Y      YRD + R  G
Sbjct:   88 DPTTYEGAMLDIDSSRWQEAMKSEMDSMYSNGVWTLVDPPEGIVPIGCKWIYKRKIGSDGKVETYKARLVAKGYNQKQGVDYEETFSPVAMLKSIRILLAIAAYYDYEICQMDVKTAFLNGNIEEDLYMEQPKGFISSGEDHKVCKLKRSIYGLKQASRSWNIRFNEAVKSFGFIQNMDEPCVYKKD-SGSAVTFLVLYVDDILIIGNDTGMISSVKLWLSSNFSMKDLGEATYILGIKIYRDRSKRLLG 336          
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Match: A0A177TV96_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TV96_9BASI)

HSP 1 Score: 156 bits (395), Expect = 1.240e-38
Identity = 84/236 (35.59%), Postives = 138/236 (58.47%), Query Frame = 1
Query:   25 LDPEPTTMGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVHVGLLW*KKFGIELEAKGFQRSQADPCVF-RWILHGVVVAVIVVYVDDLLVASATKRDEEQAVKDLCSCFPIKDLGEASY 729
            L+P+     + +   EW  WK+ +  E+        W++VE PKG+ V+G+R V+K K+D+DGR  +YK RLVAQGF Q  GI + ++ +P    ++IR+++S+  AL      +D+  AYL   ++ E+Y++ P  Y D   +V LL++A+YGL   G  W      +L + G+ + Q++PC+F R+   G V+  + VYVDD+++A+  K   +Q  K+  S F I D GE S+
Sbjct:  689 LEPQNLKQAKQRPLEEWRHWKEAMDEEIGSLVEMKTWELVELPKGRDVVGSRWVYKLKLDRDGRASRYKGRLVAQGFTQRDGIDFSDTFAPVARLSTIRIIISLALALSLNLGSIDIKTAYLNGKLQEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAWFDTLKGKLLSAGYTQIQSEPCLFVRFGDAGPVI--LAVYVDDIVIAARGKEGVDQVKKEFASWFKITDNGELSH 922          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188951.5187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GYH9_9APHY1.050e-4639.30Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A401H727_9APHY1.660e-4238.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A284QR88_ARMOS6.250e-4239.22Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A401GN13_9APHY1.330e-4039.91Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A0C2WN23_AMAMK8.350e-4039.74Integrase catalytic domain-containing protein (Fra... [more]
A0A5R9QKQ6_9BACT9.190e-4038.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C3AKI0_9AGAM1.510e-3935.17Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A401GP19_9APHY2.230e-3938.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001C988E4D4.410e-3934.80hypothetical protein n=3 Tax=Bacteria TaxID=2 RepI... [more]
A0A177TV96_9BASI1.240e-3835.59Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig188951contigH-elongata_contig188951:157..1193 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score116.7
Seed ortholog evalue9.7e-24
Seed eggNOG ortholog120017.I2FSX8
EggNOG free text desc.Encoded by
EggNOG OGs38DPC@33154,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelBasidiomycota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1037
Cds size468
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig188951.5187.1prot_H-elongata_contig188951.5187.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig188951 681..1148 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930080.6514783-UTR-H-elongata_contig188951:156..6801622930080.6514783-UTR-H-elongata_contig188951:156..680Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig188951 157..680 -
1691679273.292745-UTR-H-elongata_contig188951:156..6801691679273.292745-UTR-H-elongata_contig188951:156..680Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig188951 157..680 -
1622930080.6807592-UTR-H-elongata_contig188951:1148..11931622930080.6807592-UTR-H-elongata_contig188951:1148..1193Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig188951 1149..1193 -
1691679273.3095593-UTR-H-elongata_contig188951:1148..11931691679273.3095593-UTR-H-elongata_contig188951:1148..1193Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig188951 1149..1193 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930080.6651719-CDS-H-elongata_contig188951:680..11481622930080.6651719-CDS-H-elongata_contig188951:680..1148Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188951 681..1148 -
1691679273.3016407-CDS-H-elongata_contig188951:680..11481691679273.3016407-CDS-H-elongata_contig188951:680..1148Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188951 681..1148 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig188951.5187.1

>prot_H-elongata_contig188951.5187.1 ID=prot_H-elongata_contig188951.5187.1|Name=mRNA_H-elongata_contig188951.5187.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGEAQASSEWPQWKKTIAREMEGKTARGVWQVVERPKGKTVLGTRVVFKR
KIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAA
LGWEARQLDVDMAYLEADVEGEIYVELPEAYCDSRKQVGLLKKAMYGLVH
VGLLW*
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mRNA from alignment at H-elongata_contig188951:157..1193-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig188951.5187.1 ID=mRNA_H-elongata_contig188951.5187.1|Name=mRNA_H-elongata_contig188951.5187.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1037bp|location=Sequence derived from alignment at H-elongata_contig188951:157..1193- (Himanthalia elongata Himel1 dioecious)
CCGACGTGCGGGTCCGCGAGGCAGCTAGACCCAGAGCCGACAACCATGGG CGAGGCGCAAGCGTCGTCGGAGTGGCCGCAATGGAAAAAGACGATCGCGC GCGAGATGGAGGGGAAAACTGCTCGAGGCGTGTGGCAGGTGGTAGAGCGC CCAAAAGGGAAGACGGTGTTGGGCACGAGAGTAGTTTTCAAGCGAAAAAT CGACAAGGATGGAAGGATCGAGAAGTATAAATGTCGTCTCGTGGCGCAGG GTTTCAGGCAGGTCAAAGGCATACACTACGAGGAATCCTCCTCGCCGACT CCTGCGCAGGCCAGCATTCGGATGGTACTCAGCATGATCGCGGCTCTTGG CTGGGAGGCGAGGCAGCTGGACGTCGACATGGCCTACCTGGAGGCCGATG TGGAGGGGGAGATCTACGTTGAGCTCCCGGAGGCATACTGTGACTCCAGG AAGCAAGTCGGTCTACTAAAGAAGGCAATGTACGGACTCGTCCACGTCGG GCTGCTGTGGTAAAAAAAGTTCGGGATCGAGCTCGAGGCGAAGGGTTTCC AGAGATCTCAAGCCGACCCATGCGTGTTCCGGTGGATTCTTCACGGGGTA GTGGTAGCCGTCATTGTGGTCTACGTCGACGACCTGCTGGTTGCTAGTGC GACGAAACGTGACGAGGAGCAAGCGGTGAAGGACCTGTGCTCGTGTTTCC CCATCAAGGATCTGGGGGAGGCTTCGTATTACCGGGATGCCACATCACGC GGGACCGGAACGCCGGGACACTGACGTTCTACCAGCGTCAGTACATACAG ACTATGGCGGAACGTTTTGGCTTGACGAAGACCAGCATCATCCCGTCCGT GGCAGGAAGAAAAGCCCTTTCAAAATCAGACAGCCAACAAACGGACGCAG AGGTTGAAGAAATGCGCCAGATTCCCTACCGAGAAATCGTTGGGGCCCTA ATGTGGGCAGCGGCGATGACCAGGCCCGACATTTCATTCGCTGCGCATCA ACTGGAAAAATTCAACGAAAACCCGGGACCGACACAC
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Coding sequence (CDS) from alignment at H-elongata_contig188951:157..1193-

>mRNA_H-elongata_contig188951.5187.1 ID=mRNA_H-elongata_contig188951.5187.1|Name=mRNA_H-elongata_contig188951.5187.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig188951:157..1193- (Himanthalia elongata Himel1 dioecious)
ATGGGCGAGGCGCAAGCGTCGTCGGAGTGGCCGCAATGGAAAAAGACGAT
CGCGCGCGAGATGGAGGGGAAAACTGCTCGAGGCGTGTGGCAGGTGGTAG
AGCGCCCAAAAGGGAAGACGGTGTTGGGCACGAGAGTAGTTTTCAAGCGA
AAAATCGACAAGGATGGAAGGATCGAGAAGTATAAATGTCGTCTCGTGGC
GCAGGGTTTCAGGCAGGTCAAAGGCATACACTACGAGGAATCCTCCTCGC
CGACTCCTGCGCAGGCCAGCATTCGGATGGTACTCAGCATGATCGCGGCT
CTTGGCTGGGAGGCGAGGCAGCTGGACGTCGACATGGCCTACCTGGAGGC
CGATGTGGAGGGGGAGATCTACGTTGAGCTCCCGGAGGCATACTGTGACT
CCAGGAAGCAAGTCGGTCTACTAAAGAAGGCAATGTACGGACTCGTCCAC
GTCGGGCTGCTGTGGTAAATGGGCGAGGCGCAAGCGTCGTCGGAGTGGCC
GCAATGGAAAAAGACGATCGCGCGCGAGATGGAGGGGAAAACTGCTCGAG
GCGTGTGGCAGGTGGTAGAGCGCCCAAAAGGGAAGACGGTGTTGGGCACG
AGAGTAGTTTTCAAGCGAAAAATCGACAAGGATGGAAGGATCGAGAAGTA
TAAATGTCGTCTCGTGGCGCAGGGTTTCAGGCAGGTCAAAGGCATACACT
ACGAGGAATCCTCCTCGCCGACTCCTGCGCAGGCCAGCATTCGGATGGTA
CTCAGCATGATCGCGGCTCTTGGCTGGGAGGCGAGGCAGCTGGACGTCGA
CATGGCCTACCTGGAGGCCGATGTGGAGGGGGAGATCTACGTTGAGCTCC
CGGAGGCATACTGTGACTCCAGGAAGCAAGTCGGTCTACTAAAGAAGGCA
ATGTACGGACTCGTCCACGTCGGGCTGCTGTGGTAA
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