prot_H-elongata_contig188670.5175.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig188670.5175.1
Unique Nameprot_H-elongata_contig188670.5175.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188670.5175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 6..46
e-value: 8.5E-9
score: 35.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 19..54
score: 9.353
NoneNo IPR availableGENE3D1.10.238.10coord: 1..54
e-value: 1.6E-8
score: 36.4
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 2..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig188670contigH-elongata_contig188670:60..227 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig188670.5175.1mRNA_H-elongata_contig188670.5175.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig188670 45..227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig188670.5175.1 ID=prot_H-elongata_contig188670.5175.1|Name=mRNA_H-elongata_contig188670.5175.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
MINVVNLQKAMIRLGHSSISTADCEAMIREVDRQGEGYISKEDFSHLQEC
SFENL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair