prot_H-elongata_contig106306.517.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig106306.517.1
Unique Name	prot_H-elongata_contig106306.517.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	188

Homology

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BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot
Match: D7FZK5_ECTSI (AP-3 complex subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZK5_ECTSI)

HSP 1 Score: 367 bits (941), Expect = 9.230e-117
Identity = 181/188 (96.28%), Postives = 184/188 (97.87%), Query Frame = 0

Query:    1 FHSAPQVRKLTYLQMLGYDMSWAAFYVVEVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFERIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK 188
            F  A  +RKLTYLQMLGYDMSWAAFYV+EVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTF+RIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK
Sbjct:   41 FIKAQAIRKLTYLQMLGYDMSWAAFYVIEVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFDRIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK 228

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BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot
Match: A0A835Z6U0_9STRA (Clathrin/coatomer adaptor, adaptin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6U0_9STRA)

HSP 1 Score: 296 bits (758), Expect = 6.560e-96
Identity = 144/188 (76.60%), Postives = 164/188 (87.23%), Query Frame = 0

Query:    1 FHSAPQVRKLTYLQMLGYDMSWAAFYVVEVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFERIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK 188
            F  A  VRKLTYLQM+GYDMSWAAF V+EVMT  RF HKRVGYLAANQ FTE+T+V+LL TNHL+KEF S N YD+GLAINCLANIATP LSRDL+ D+  LL + + YVRKKALL MYKLFI YPQGLRL F+RI++RL+D+DS VVSCAVN+ICELADKNP+NYLA+AP+FFRLLTTSSNNWMLIK
Sbjct:   41 FIKAQAVRKLTYLQMIGYDMSWAAFSVIEVMTSARFGHKRVGYLAANQTFTEETDVILLTTNHLKKEFNSGNQYDIGLAINCLANIATPDLSRDLLGDVSALLTHQRSYVRKKALLVMYKLFINYPQGLRLCFDRIRDRLDDTDSGVVSCAVNIICELADKNPRNYLALAPRFFRLLTTSSNNWMLIK 228

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BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot
Match: A0A397A277_9STRA (Adaptin_N domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A277_9STRA)

HSP 1 Score: 273 bits (698), Expect = 5.900e-88
Identity = 129/188 (68.62%), Postives = 160/188 (85.11%), Query Frame = 0

Query:    1 FHSAPQVRKLTYLQMLGYDMSWAAFYVVEVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFERIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK 188
            F  +  +RKLTYL M GYDMSWAAF+ VEVM+  RFAHKR+GYLAA+Q FT++T+VVLLCTN  +KEF S N Y+VGLA+N +ANI T  L+RDL+ D++ L+ +HKPYVRKKA L +YKLF++YPQGLRL+F+R+KER+E+ D SVVSC+VNVICELA+K PKNY+ +APQFFRLLTTSSNNWMLIK
Sbjct:  145 FIKSQAIRKLTYLNMQGYDMSWAAFHTVEVMSYERFAHKRIGYLAASQSFTQNTDVVLLCTNLFKKEFGSVNEYEVGLALNAMANICTLDLARDLLGDILNLMNSHKPYVRKKATLILYKLFLRYPQGLRLSFDRLKERMEEPDVSVVSCSVNVICELANKKPKNYVGLAPQFFRLLTTSSNNWMLIK 332

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BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot
Match: A0A397D649_9STRA (Adaptin_N domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D649_9STRA)

HSP 1 Score: 273 bits (698), Expect = 1.610e-87
Identity = 129/188 (68.62%), Postives = 160/188 (85.11%), Query Frame = 0

Query:    1 FHSAPQVRKLTYLQMLGYDMSWAAFYVVEVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFERIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK 188
            F  +  +RKLTYL M GYDMSWAAF+ VEVM+  RFAHKR+GYLAA+Q FT++T+VVLLCTN  +KEF S N Y+VGLA+N +ANI T  L+RDL+ D++ L+ +HKPYVRKKA L +YKLF++YPQGLRL+F+R+KER+E+ D SVVSC+VNVICELA+K PKNY+ +APQFFRLLTTSSNNWMLIK
Sbjct:   41 FIKSQAIRKLTYLNMQGYDMSWAAFHTVEVMSYERFAHKRIGYLAASQSFTQNTDVVLLCTNLFKKEFGSVNEYEVGLALNAMANICTLDLARDLLGDILNLMNSHKPYVRKKATLILYKLFLRYPQGLRLSFDRLKERMEEPDVSVVSCSVNVICELANKKPKNYVGLAPQFFRLLTTSSNNWMLIK 228

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BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot
Match: A0A7S1FY82_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY82_9STRA)

HSP 1 Score: 264 bits (675), Expect = 2.110e-87
Identity = 129/188 (68.62%), Postives = 156/188 (82.98%), Query Frame = 0

Query:    1 FHSAPQVRKLTYLQMLGYDMSWAAFYVVEVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFERIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK 188
            F  A  +RKLT+LQM+GYDMSWA+F V+E+M+  RFAHKRVGYLAA Q FTEDT+V+LLCTN L+KE  S   Y+ GLA+NCL+NI T  L+RDL+SDL  L  +  PYVRKKA+L ++KLF+KYPQGLRLTF+RI++ L DSD SVVSCAVNVI EL+DKNPKNYL MAPQFF+LLT+S+NNW LIK
Sbjct:    8 FTKANALRKLTFLQMMGYDMSWASFPVIEIMSSTRFAHKRVGYLAATQGFTEDTDVILLCTNLLKKELLSTEVYEAGLAVNCLSNIVTEDLARDLLSDLTVLTQHSAPYVRKKAILGLFKLFMKYPQGLRLTFDRIQQCLNDSDPSVVSCAVNVITELSDKNPKNYLVMAPQFFQLLTSSTNNWTLIK 195

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BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot
Match: A0A0P1A8R1_PLAHL (Ap-3 complex subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8R1_PLAHL)

HSP 1 Score: 271 bits (694), Expect = 2.470e-86
Identity = 132/188 (70.21%), Postives = 159/188 (84.57%), Query Frame = 0

Query:    1 FHSAPQVRKLTYLQMLGYDMSWAAFYVVEVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFERIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK 188
            F  A  VRKLTYL MLGYDM WAAF+VVEVM+  RFAHKR+GY AA Q FT+ T+VVLLCTN L+KEF S + Y+VGLAIN LANI T  L+RDL+ D++ ++G+ KPYVRKKA L +YK+F++YPQGLRL+F+R+KER+E+ D +VVSCAVNVICELA+K PKNYL +APQFFRLLTTSSNNWMLIK
Sbjct:   41 FIKAQAVRKLTYLHMLGYDMCWAAFHVVEVMSYERFAHKRIGYNAACQSFTQSTDVVLLCTNLLKKEFGSTSEYEVGLAINVLANIVTTDLARDLLGDVLAMMGSPKPYVRKKATLVLYKMFLRYPQGLRLSFDRLKERMEEPDVTVVSCAVNVICELANKKPKNYLGLAPQFFRLLTTSSNNWMLIK 228

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BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot
Match: F0YKL7_AURAN (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKL7_AURAN)

HSP 1 Score: 275 bits (702), Expect = 3.700e-86
Identity = 131/185 (70.81%), Postives = 159/185 (85.95%), Query Frame = 0

Query:    4 APQVRKLTYLQMLGYDMSWAAFYVVEVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFERIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK 188
            A  VRKLTYLQM+GYD+SWA+F +VE M+  RFAHKR+GYLAA QCF+E T+VVLL TN L+KEF+S + Y+VGLA+NCLANI T  L+RDL+ D V L+ + KPYVRKKA+ +M+KLF+KYPQGLRLTFE++KERL D + +V SCAVNV+CELA+KNP NYL+MAPQFFRLLTTSSNNWMLIK
Sbjct:   35 AQAVRKLTYLQMMGYDVSWASFAIVETMSQARFAHKRIGYLAACQCFSESTDVVLLTTNLLKKEFQSTSQYEVGLAVNCLANIVTKDLARDLLQDSVLLMSHSKPYVRKKAVSSMFKLFVKYPQGLRLTFEKLKERLADGEPAVTSCAVNVVCELANKNPNNYLSMAPQFFRLLTTSSNNWMLIK 219

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BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot
Match: A0A812VEC3_SYMMI (AP3D1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VEC3_SYMMI)

HSP 1 Score: 263 bits (671), Expect = 6.950e-86
Identity = 125/191 (65.45%), Postives = 160/191 (83.77%), Query Frame = 0

Query:    1 FHSAPQVRKLTYLQMLGYDMSWAAFYVVEVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQ---NPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFERIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK 188
            F  A  VRKLTY+QM+GY++SWA+F ++EVM+  RF HKR+GYLAANQ FTE T++++L TN  +KEF +Q   N Y++GLA+NCLANIA   L+RD +SD+V LL + +PY+RKKA++ ++KL+IKYPQGLRLTF+ + E+L DSD SVVSCAVNVICELA KNPKNYL+MAP+FF+LLTTSSNNWMLIK
Sbjct:   51 FVKAEAVRKLTYIQMMGYNVSWASFSIMEVMSQARFEHKRIGYLAANQSFTESTDILMLTTNLFKKEFSAQSSRNHYEIGLAMNCLANIANKDLARDCMSDVVSLLDHSRPYIRKKAVICLFKLYIKYPQGLRLTFDSLMEKLNDSDGSVVSCAVNVICELARKNPKNYLSMAPKFFKLLTTSSNNWMLIK 241

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BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot
Match: W7TQ06_9STRA (Ap-3 complex subunit delta-1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ06_9STRA)

HSP 1 Score: 279 bits (713), Expect = 6.860e-85
Identity = 136/188 (72.34%), Postives = 165/188 (87.77%), Query Frame = 0

Query:    1 FHSAPQVRKLTYLQMLGYDMSWAAFYVVEVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFERIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK 188
            F  A  VRKLTYLQM+GYDMSWA+F VVEVM+ PRFAHKR+G LAA Q FT+ T+VVLL TN L+KEF+S N Y+VGLAINCLANI T  L+RDLI D+V L+ + KPYVRKKA+L++YKL+++YPQ LRLTFER+K++L+D++S+VVSCAVNVICELA+KNP NYLA+AP+FFRLLTTSSNNWMLIK
Sbjct:   41 FVKAQAVRKLTYLQMMGYDMSWASFAVVEVMSSPRFAHKRIGCLAACQTFTDATDVVLLTTNLLKKEFQSPNQYEVGLAINCLANIVTRDLARDLIGDVVSLIAHSKPYVRKKAVLSLYKLYLRYPQALRLTFERLKDKLDDAESAVVSCAVNVICELANKNPTNYLALAPKFFRLLTTSSNNWMLIK 228

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BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot
Match: A0A3R6XGB3_9STRA (Adaptin_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XGB3_9STRA)

HSP 1 Score: 273 bits (698), Expect = 2.490e-84
Identity = 129/188 (68.62%), Postives = 160/188 (85.11%), Query Frame = 0

Query:    1 FHSAPQVRKLTYLQMLGYDMSWAAFYVVEVMTMPRFAHKRVGYLAANQCFTEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLVQLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFERIKERLEDSDSSVVSCAVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK 188
            F  +  +RKLTYL M GYDMSWAAF+ VEVM+  RFAHKR+GYLAA+Q FT++T+VVLLCTN  +KEF S N Y+VGLA+N +ANI T  L+RDL+ D++ L+ +HKPYVRKKA L +YKLF++YPQGLRL+F+R+KER+E+ D SVVSC+VNVICELA+K PKNY+ +APQFFRLLTTSSNNWMLIK
Sbjct:  193 FIKSQAIRKLTYLNMQGYDMSWAAFHTVEVMSYERFAHKRIGYLAASQSFTQNTDVVLLCTNLFKKEFGSVNEYEVGLALNAMANICTLDLARDLLGDILNLMNSHKPYVRKKATLILYKLFLRYPQGLRLSFDRLKERMEEPDVSVVSCSVNVICELANKKPKNYVGLAPQFFRLLTTSSNNWMLIK 380

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot

BLAST of mRNA_H-elongata_contig106306.517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FZK5_ECTSI	9.230e-117	96.28	AP-3 complex subunit delta n=2 Tax=Ectocarpus TaxI...	[more]
A0A835Z6U0_9STRA	6.560e-96	76.60	Clathrin/coatomer adaptor, adaptin-like protein n=...	[more]
A0A397A277_9STRA	5.900e-88	68.62	Adaptin_N domain-containing protein n=3 Tax=Aphano...	[more]
A0A397D649_9STRA	1.610e-87	68.62	Adaptin_N domain-containing protein (Fragment) n=5...	[more]
A0A7S1FY82_9STRA	2.110e-87	68.62	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A0P1A8R1_PLAHL	2.470e-86	70.21	Ap-3 complex subunit n=1 Tax=Plasmopara halstedii ...	[more]
F0YKL7_AURAN	3.700e-86	70.81	Adaptin_N domain-containing protein (Fragment) n=1...	[more]
A0A812VEC3_SYMMI	6.950e-86	65.45	AP3D1 protein n=1 Tax=Symbiodinium microadriaticum...	[more]
W7TQ06_9STRA	6.860e-85	72.34	Ap-3 complex subunit delta-1 n=2 Tax=Nannochlorops...	[more]
A0A3R6XGB3_9STRA	2.490e-84	68.62	Adaptin_N domain-containing protein n=1 Tax=Aphano...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 5..188 e-value: 3.7E-70 score: 238.9
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 6..188 e-value: 1.2E-54 score: 185.8
IPR017105	Adaptor protein complex AP-3, delta subunit	PANTHER	PTHR22781	DELTA ADAPTIN-RELATED	coord: 7..188
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 7..186

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig106306	contig	H-elongata_contig106306:179..1965 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig106306.517.1	mRNA_H-elongata_contig106306.517.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig106306 179..1965 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig106306.517.1 ID=prot_H-elongata_contig106306.517.1|Name=mRNA_H-elongata_contig106306.517.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=188bp
FHSAPQVRKLTYLQMLGYDMSWAAFYVVEVMTMPRFAHKRVGYLAANQCF
TEDTEVVLLCTNHLQKEFKSQNPYDVGLAINCLANIATPGLSRDLISDLV
QLLGNHKPYVRKKALLAMYKLFIKYPQGLRLTFERIKERLEDSDSSVVSC
AVNVICELADKNPKNYLAMAPQFFRLLTTSSNNWMLIK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR002553	Clathrin/coatomer_adapt-like_N
IPR017105	AP3_complex_dsu
IPR016024	ARM-type_fold