prot_H-elongata_contig18856.5163.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18856.5163.1
Unique Nameprot_H-elongata_contig18856.5163.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig18856.5163.1 vs. uniprot
Match: A0A6H5KIQ9_9PHAE (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ9_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 4.090e-20
Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 AVELIHANIAADDYVSPATGVGRQEAAKFIAARESGIFLCGESHAA-----LSWVKVNDDFCDCP-DGSDEPGTSACSQGMF 76
            AV LI  N A D++  PA+GVGR++AA+F AAR +G  +C  S  A     +SW K+ND+FCDCP DGSDEPGTSACS G+F
Sbjct:   47 AVALIRENAAGDEFTPPASGVGRRDAARFTAARAAGKLVCTSSSEAGGSTEISWDKINDNFCDCPHDGSDEPGTSACSNGVF 128          
BLAST of mRNA_H-elongata_contig18856.5163.1 vs. uniprot
Match: D7G0Y2_ECTSI (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y2_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 1.040e-19
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 AVELIHANIAADDYVSPATGVGRQEAAKFIAARESGIFLCG-----ESHAALSWVKVNDDFCDCP-DGSDEPGTSACSQGMF 76
            AV LI  N A D++  PA+GVGR++AA+F AAR +G  +C      E    +SW K+ND+FCDCP DGSDEPGTSACS G+F
Sbjct:   37 AVALIRENAAGDEFTPPASGVGRRDAARFAAARAAGKLVCTSSSGEEGSTEISWDKINDNFCDCPHDGSDEPGTSACSNGVF 118          
BLAST of mRNA_H-elongata_contig18856.5163.1 vs. uniprot
Match: A0A4E0QSY9_FASHE (Glucosidase 2 subunit beta n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A4E0QSY9_FASHE)

HSP 1 Score: 69.7 bits (169), Expect = 5.180e-13
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   38 FLCGESHAALSWVKVNDDFCDCPDGSDEPGTSACSQGMFIALDPHLKAI 86
            F C  +  ++ W KVNDD+CDCPDGSDEPGTSAC+ G+F   D   K +
Sbjct:   13 FRCIGNSLSIPWTKVNDDYCDCPDGSDEPGTSACNNGLFFCRDVQYKVV 61          
BLAST of mRNA_H-elongata_contig18856.5163.1 vs. uniprot
Match: C1L6G9_SCHJA (Putative Glucosidase II beta subunit n=1 Tax=Schistosoma japonicum TaxID=6182 RepID=C1L6G9_SCHJA)

HSP 1 Score: 68.6 bits (166), Expect = 8.560e-12
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:   37 IFLCGESHAALSWVKVNDDFCDCPDGSDEPGTSACSQGMFIALDPHLKAI 86
            +F C +  +A+SW+KVNDD+CDC DGSDEPGTSAC  G F   D   + +
Sbjct:   40 LFTCLDGSSAVSWLKVNDDYCDCRDGSDEPGTSACLNGRFFCRDMQYRPV 89          
BLAST of mRNA_H-elongata_contig18856.5163.1 vs. uniprot
Match: A0A183S1S9_9TREM (PRKCSH-like domain-containing protein n=1 Tax=Schistosoma rodhaini TaxID=6188 RepID=A0A183S1S9_9TREM)

HSP 1 Score: 65.1 bits (157), Expect = 9.200e-12
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0
Query:   38 FLCGESHAALSWVKVNDDFCDCPDGSDEPGTSACSQGMFIALDPHLKAI 86
            F C +  +A+SW +VNDD+CDC DGSDEPGTSAC  G F   D   + +
Sbjct:   41 FTCLDGSSAISWWQVNDDYCDCRDGSDEPGTSACLNGRFFCRDMQYRPV 89          
BLAST of mRNA_H-elongata_contig18856.5163.1 vs. uniprot
Match: A0A504YAA2_FASGI (Glucosidase 2 subunit beta n=1 Tax=Fasciola gigantica TaxID=46835 RepID=A0A504YAA2_FASGI)

HSP 1 Score: 68.9 bits (167), Expect = 9.870e-12
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   38 FLCGESHAALSWVKVNDDFCDCPDGSDEPGTSACSQGMFIALDPHLKAI 86
            F C  +  ++ W KVNDD+CDCPDGSDEPGTSAC+ G+F   D   K +
Sbjct:   15 FRCIGNSLSIPWSKVNDDYCDCPDGSDEPGTSACNNGLFFCRDVQYKVV 63          
BLAST of mRNA_H-elongata_contig18856.5163.1 vs. uniprot
Match: C1L6G8_SCHJA (Glucosidase 2 subunit beta n=5 Tax=Schistosoma japonicum TaxID=6182 RepID=C1L6G8_SCHJA)

HSP 1 Score: 68.6 bits (166), Expect = 1.290e-11
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:   37 IFLCGESHAALSWVKVNDDFCDCPDGSDEPGTSACSQGMFIALDPHLKAI 86
            +F C +  +A+SW+KVNDD+CDC DGSDEPGTSAC  G F   D   + +
Sbjct:   40 LFTCLDGSSAVSWLKVNDDYCDCRDGSDEPGTSACLNGRFFCRDMQYRPV 89          
BLAST of mRNA_H-elongata_contig18856.5163.1 vs. uniprot
Match: A0A1V2LE37_CYBFA (Glucosidase 2 subunit beta n=2 Tax=Cyberlindnera fabianii TaxID=36022 RepID=A0A1V2LE37_CYBFA)

HSP 1 Score: 66.6 bits (161), Expect = 6.450e-11
Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   20 GVGRQEAAKFIAARESGIFLC-GESHAALSWVKVNDDFCDCPDGSDEPGTSACSQGMF 76
            GV  Q+A K++   E G + C G     L W +VNDDFCDCPDGSDEPG+SAC  G F
Sbjct:   28 GVSPQDAEKYVP-NEQGKWACLGNPEIILDWNQVNDDFCDCPDGSDEPGSSACPNGKF 84          
BLAST of mRNA_H-elongata_contig18856.5163.1 vs. uniprot
Match: A0A183KG83_9TREM (PRKCSH-like domain-containing protein n=1 Tax=Schistosoma curassoni TaxID=6186 RepID=A0A183KG83_9TREM)

HSP 1 Score: 63.2 bits (152), Expect = 8.090e-11
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   38 FLCGESHAALSWVKVNDDFCDCPDGSDEPGTSACSQGMFIALDPHLKAI 86
            F C +  +A+ W +VNDD+CDC DGSDEPGTSAC  G F   D   + +
Sbjct:   41 FTCLDGSSAIPWWQVNDDYCDCRDGSDEPGTSACLNGRFFCRDMQYRPV 89          
BLAST of mRNA_H-elongata_contig18856.5163.1 vs. uniprot
Match: A0A094ZIS7_SCHHA (Glucosidase 2 subunit beta n=1 Tax=Schistosoma haematobium TaxID=6185 RepID=A0A094ZIS7_SCHHA)

HSP 1 Score: 63.2 bits (152), Expect = 8.280e-11
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   38 FLCGESHAALSWVKVNDDFCDCPDGSDEPGTSACSQGMFIALDPHLKAI 86
            F C +  +A+ W +VNDD+CDC DGSDEPGTSAC  G F   D   + +
Sbjct:   41 FTCLDGSSAIPWWQVNDDYCDCRDGSDEPGTSACLNGRFFCRDMQYRPV 89          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18856.5163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIQ9_9PHAE4.090e-2057.32Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sp. ... [more]
D7G0Y2_ECTSI1.040e-1956.10Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sili... [more]
A0A4E0QSY9_FASHE5.180e-1355.10Glucosidase 2 subunit beta n=1 Tax=Fasciola hepati... [more]
C1L6G9_SCHJA8.560e-1254.00Putative Glucosidase II beta subunit n=1 Tax=Schis... [more]
A0A183S1S9_9TREM9.200e-1253.06PRKCSH-like domain-containing protein n=1 Tax=Schi... [more]
A0A504YAA2_FASGI9.870e-1255.10Glucosidase 2 subunit beta n=1 Tax=Fasciola gigant... [more]
C1L6G8_SCHJA1.290e-1154.00Glucosidase 2 subunit beta n=5 Tax=Schistosoma jap... [more]
A0A1V2LE37_CYBFA6.450e-1155.17Glucosidase 2 subunit beta n=2 Tax=Cyberlindnera f... [more]
A0A183KG83_9TREM8.090e-1151.02PRKCSH-like domain-containing protein n=1 Tax=Schi... [more]
A0A094ZIS7_SCHHA8.280e-1151.02Glucosidase 2 subunit beta n=1 Tax=Schistosoma hae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028146Glucosidase II beta subunit, N-terminalPFAMPF12999PRKCSH-likecoord: 4..77
e-value: 3.6E-17
score: 62.7
IPR026874Glucosidase 2 subunit betaPANTHERPTHR12630:SF1GLUCOSIDASE 2 SUBUNIT BETAcoord: 16..77
IPR039794Glucosidase II beta subunit-likePANTHERPTHR12630N-LINKED OLIGOSACCHARIDE PROCESSINGcoord: 16..77
IPR036055LDL receptor-like superfamilySUPERFAMILY57424LDL receptor-like modulecoord: 36..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18856contigH-elongata_contig18856:6719..6976 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18856.5163.1mRNA_H-elongata_contig18856.5163.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18856 6719..6976 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18856.5163.1 ID=prot_H-elongata_contig18856.5163.1|Name=mRNA_H-elongata_contig18856.5163.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
AVELIHANIAADDYVSPATGVGRQEAAKFIAARESGIFLCGESHAALSWV
KVNDDFCDCPDGSDEPGTSACSQGMFIALDPHLKAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028146PRKCSH_N
IPR026874Glucosidase_2_bsu
IPR039794Gtb1-like
IPR036055LDL_receptor-like_sf