mRNA_H-elongata_contig188370.5152.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A8F0FAZ0_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAZ0_9PHAE) HSP 1 Score: 321 bits (823), Expect = 1.300e-110 Identity = 165/175 (94.29%), Postives = 172/175 (98.29%), Query Frame = 1
Query: 1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYL 525
MNSFFPLIYSI+LFFILFIISFYLIKQIVNTQKVEKKIIDLQD+IKTDKASYE+FYKLGQLYLKKKLFYKAILLFRRALKTWNT+DKI LGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLY+EAYDCYKTTLVWN KN++ASSRIL VKRKVAYL
Sbjct: 1 MNSFFPLIYSITLFFILFIISFYLIKQIVNTQKVEKKIIDLQDSIKTDKASYEIFYKLGQLYLKKKLFYKAILLFRRALKTWNTNDKIALGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYSEAYDCYKTTLVWNPKNELASSRILTVKRKVAYL 175
BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A8F0F9I7_9PHAE (Uncharacterized protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9I7_9PHAE) HSP 1 Score: 260 bits (665), Expect = 1.540e-86 Identity = 130/176 (73.86%), Postives = 152/176 (86.36%), Query Frame = 1
Query: 1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 528
MNS FPLIYS LF LFIISF+++KQI NTQK+EKKI+ LQ+N+K + SYE FYKLGQLYLKKKLFYKAILLFR+ALK WN DDKIGLGSLYNTIGFT+F LKQY LA YYY IAI+I+PDYTLALTNLAY YEK+NL EAY+CYK+TL+W+ +N++ASSRIL V++K YLV
Sbjct: 1 MNSLFPLIYSTVLFIFLFIISFFILKQISNTQKIEKKIVKLQENVKANNTSYEAFYKLGQLYLKKKLFYKAILLFRQALKIWNPDDKIGLGSLYNTIGFTFFTLKQYSLAKYYYSIAIEILPDYTLALTNLAYTYEKLNLLGEAYNCYKSTLLWDPENKIASSRILVVEKKKGYLV 176
BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A0S0GMY7_COSCS (Uncharacterized protein n=26 Tax=Laminariales TaxID=2886 RepID=A0A0S0GMY7_COSCS) HSP 1 Score: 259 bits (663), Expect = 3.450e-86 Identity = 130/176 (73.86%), Postives = 152/176 (86.36%), Query Frame = 1
Query: 1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 528
MNS FPL+YSI+LF LF+ISFY++KQI NTQK+EKKI LQ++IK D SYE FYKLGQLYLKKKLFYKAILLFR+ALK WN +DKIGLGSLYNTIGFTYF LKQY LA YYY IAI+IIPDYTLALTNL Y+YEK+NL E+Y+CYK LVW+ +N++ASSRIL V++K+ YLV
Sbjct: 1 MNSLFPLVYSIALFVFLFVISFYILKQITNTQKLEKKIFKLQESIKKDNVSYETFYKLGQLYLKKKLFYKAILLFRQALKAWNPNDKIGLGSLYNTIGFTYFTLKQYSLANYYYSIAIEIIPDYTLALTNLGYSYEKLNLSVESYNCYKNALVWDPQNKLASSRILVVEKKLRYLV 176
BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A8F0F7S5_9PHAE (Uncharacterized protein n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0F7S5_9PHAE) HSP 1 Score: 241 bits (614), Expect = 9.290e-79 Identity = 123/172 (71.51%), Postives = 145/172 (84.30%), Query Frame = 1
Query: 1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKV 516
MNS FPL+YS +LF L +ISFY+IKQI NTQKVEKKI LQ+ +K + ASYE Y+LGQLYLKKKLFYKAILLFR+ALKTW+T+DKIGLGSLYNTIGFTYF LKQY LA YYY IAI IIPDYTLALTNL Y YEK++L EAY+CYK TLVW+ KN++A+ RIL ++++
Sbjct: 1 MNSLFPLVYSAALFIFLSVISFYIIKQISNTQKVEKKIFVLQEAVKKNDASYESLYELGQLYLKKKLFYKAILLFRKALKTWDTNDKIGLGSLYNTIGFTYFTLKQYKLASYYYNIAITIIPDYTLALTNLGYTYEKLDLTVEAYNCYKDTLVWDPKNELAALRILITEKRL 172
BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A8F0F7S0_AKKLU (Uncharacterized protein n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F7S0_AKKLU) HSP 1 Score: 241 bits (614), Expect = 9.290e-79 Identity = 120/176 (68.18%), Postives = 144/176 (81.82%), Query Frame = 1
Query: 1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 528
MNS FPL+YS +LF L +ISFY+IKQI NTQKVEKKI LQ +KT SYE FYKLGQLYLKKKL+YKAIL+FR AL WN++DKIGLGSLYNTIGFTYF LKQY+LA+YYY +AI IIPDYTLALTNL YAYEK+ L E++DCYK L W+SKN++A+SR L ++++ +V
Sbjct: 1 MNSLFPLVYSAALFLFLSVISFYIIKQISNTQKVEKKIFLLQQAVKTSDPSYETFYKLGQLYLKKKLYYKAILVFRNALSVWNSNDKIGLGSLYNTIGFTYFNLKQYELAVYYYNVAITIIPDYTLALTNLGYAYEKLGLTVESHDCYKKALAWDSKNELAASRYLITEKRLLTMV 176
BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A5A4MK99_9PHAE (Uncharacterized protein n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MK99_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.210e-69 Identity = 105/174 (60.34%), Postives = 138/174 (79.31%), Query Frame = 1
Query: 1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAY 522
MNS FPL+YSI+LF LF IS+Y++KQI+NTQK+EKKI LQ+ +K D YE Y+LGQLYL+KKLF KA+++FR+ALK W+ +DKIGL +LYN IGFT+F L++YD AIYYYK+AIKIIPD+TL L NL YA+EK+N Y+CYK L W+ N++AS+R L V++K+ Y
Sbjct: 1 MNSIFPLLYSIALFIFLFFISYYILKQIINTQKLEKKIFKLQELVKKDDLYYEDCYQLGQLYLRKKLFLKAVVVFRKALKLWDPNDKIGLANLYNAIGFTFFNLEEYDYAIYYYKVAIKIIPDHTLVLINLGYAFEKINSIITGYNCYKAALFWDPSNELASTRFLAVEKKLKY 174
BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A1I9LVU9_9PHAE (Uncharacterized protein n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVU9_9PHAE) HSP 1 Score: 217 bits (553), Expect = 1.720e-69 Identity = 107/176 (60.80%), Postives = 137/176 (77.84%), Query Frame = 1
Query: 1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 528
MNS FPL YSI+LF LF ISFY++KQI+NTQK+EKKI LQ K D +E Y+LGQLYLKKKLF+KAIL+FR+ALK W +DKIGLG++YN IGFT+F L+QY +IYYYKI I+IIPD+TLAL NL YA+EK+N Y+CYKT L W+ N++AS+R L + +K+ Y++
Sbjct: 1 MNSIFPLFYSIALFLFLFFISFYIVKQIINTQKLEKKIFKLQKLSKKDDLCHEDCYQLGQLYLKKKLFFKAILIFRKALKLWEPNDKIGLGNIYNAIGFTFFNLEQYYYSIYYYKITIQIIPDHTLALINLGYAFEKINSIVPGYNCYKTVLFWDPNNELASTRFLAIAKKLRYIL 176
BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: D1J7A2_ECTSI (Uncharacterized protein ycf37 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7A2_ECTSI) HSP 1 Score: 216 bits (550), Expect = 4.910e-69 Identity = 104/176 (59.09%), Postives = 142/176 (80.68%), Query Frame = 1
Query: 1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 528
MNS FPL YSI+LFF LF ISFY++KQI+NTQK+EKKI LQ+ +K D +E Y+LGQLYL+KKLF KAI++FR+ALK W+ +D IGLG+LYN IGFT+F L++Y+ AIYYYKIA++IIPD+TLAL NL YA+EK+N + Y+CY+ L W++ N +AS+R L +++K+ Y++
Sbjct: 1 MNSIFPLFYSIALFFFLFFISFYILKQIINTQKLEKKIFYLQELVKKDDLYHEDCYQLGQLYLRKKLFLKAIVVFRKALKLWDPNDIIGLGNLYNAIGFTFFNLEEYEYAIYYYKIAVQIIPDHTLALINLGYAFEKINSFVIGYNCYRAALFWDTTNDLASTRFLSIEKKLRYIL 176
BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A6B7EXQ1_9PHAE (Uncharacterized protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EXQ1_9PHAE) HSP 1 Score: 214 bits (546), Expect = 1.990e-68 Identity = 105/176 (59.66%), Postives = 139/176 (78.98%), Query Frame = 1
Query: 1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 528
MNS FPL+YSI LFF L +IS+Y++KQI+NTQK+EKKI LQ +K D YE Y+LGQLYL+K LF KA+L+FR+ALK W+ +DKIGLG+LYN IGFT+F L++YD AIYYYK+AIKIIPD+TLAL NL Y++EK+N Y+CYK L W+ NQ+AS+R +++K+ Y++
Sbjct: 1 MNSIFPLLYSIGLFFFLSLISYYIVKQIINTQKLEKKIFMLQKLVKKDHPYYEDCYQLGQLYLRKNLFLKAVLVFRKALKLWDPNDKIGLGNLYNAIGFTFFNLEEYDYAIYYYKVAIKIIPDHTLALINLGYSFEKVNSGITGYNCYKAALFWDPYNQLASTRFSVIEKKLKYIL 176
BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A8F0F768_9PHAE (Uncharacterized protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F768_9PHAE) HSP 1 Score: 209 bits (533), Expect = 8.310e-67 Identity = 110/151 (72.85%), Postives = 129/151 (85.43%), Query Frame = 1
Query: 1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTT 453
MNS FPL+YSI LF IL IIS Y+I+Q+ NTQK EKKI+ LQ NI++++ SY+ YKLGQLYLKKKLF KAILLFR ALKTW+ +DKIGLGSLYNTIGFTYF+LKQYD AIYYY+IAIKI+PDY LAL NLAY YEK++LY EA++ YK T
Sbjct: 1 MNSLFPLLYSIVLFLILLIISSYVIQQVNNTQKAEKKIMVLQKNIQSNRFSYQDNYKLGQLYLKKKLFSKAILLFREALKTWDFNDKIGLGSLYNTIGFTYFKLKQYDFAIYYYQIAIKILPDYALALKNLAYTYEKVSLYNEAFNFYKAT 151 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig188370.5152.1 >prot_H-elongata_contig188370.5152.1 ID=prot_H-elongata_contig188370.5152.1|Name=mRNA_H-elongata_contig188370.5152.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKAback to top mRNA from alignment at H-elongata_contig188370:297..827- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig188370.5152.1 ID=mRNA_H-elongata_contig188370.5152.1|Name=mRNA_H-elongata_contig188370.5152.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=531bp|location=Sequence derived from alignment at H-elongata_contig188370:297..827- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig188370:297..827- >mRNA_H-elongata_contig188370.5152.1 ID=mRNA_H-elongata_contig188370.5152.1|Name=mRNA_H-elongata_contig188370.5152.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1062bp|location=Sequence derived from alignment at H-elongata_contig188370:297..827- (Himanthalia elongata Himel1 dioecious)back to top |