mRNA_H-elongata_contig18822.5146.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18822.5146.1 vs. uniprot
Match: D7G1R6_ECTSI (Ubiquitin thioesterase OTU1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R6_ECTSI) HSP 1 Score: 489 bits (1259), Expect = 6.740e-164 Identity = 257/395 (65.06%), Postives = 294/395 (74.43%), Query Frame = 1
Query: 1 MPLNLKVTWGAGGSSARMMGLVDDLTLGHLKELVATKSGIEPARIQLKAGFPPRDVSGSETDPVVELGIRSGSAITVLERKAPAPEQATIQPRT------SSPVSSPT------------------------QEALSEEGVRLLVDMGFPREYAARALEVAGGDINTALEICTGAEPPLFSSEGAYDAVGEASRKVMVRRIIDADNSCLFNAIGYALRRKRKVGFELRRMITEAVRGNPEVYNEGILGKLPGQYCTWISNPTSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEKEGHGRRVFVIYDGVHYDALAEAAREGAPEADDVTTFDPSAADKLNMAKAVAADLKLRNQFTDMGNADIKCMVCLKLLVGEKGALEHARATGHQNFGQV 1095
MPLNLK+TWGAG SSAR++GL D +TL LK ++A KSGIE R QLKAGFPP+DVSGS+ DPVV LGI SGSA+TVLERKAP SS S P+ + A+ V+ LVDMGF + +AA+ALEVAGGDINTA+EIC +P S+ A + ++MVRRIIDADNSCLFNA+GYALRRKRKVG ELR+MITEAVRG+PEVYNEGILGK P +YC WIS+P SWGGEIELSILSKKL VMITVVDIQTNNAYSYGE+ G GRR+F+IYDG+HYDALAEAA E APE+DDVT F+PS +K +AK VAADLK RNQ+TDMGNA +KCMVC KLL GEKGALEHARATGHQNFGQV
Sbjct: 1 MPLNLKITWGAGASSARLLGLDDGITLSELKGVIAEKSGIETHRAQLKAGFPPKDVSGSDADPVVSLGITSGSALTVLERKAPPSXXXXXXXXXXXXXXXSSVPSPPSXXXXXXXXXXXXXXXXXPQLQRRQEPAVDPALVQSLVDMGFEQGFAAKALEVAGGDINTAVEICMSGDPAALGSDSGRAASTATAARIMVRRIIDADNSCLFNAVGYALRRKRKVGTELRQMITEAVRGSPEVYNEGILGKQPEEYCNWISDPKSWGGEIELSILSKKLVVMITVVDIQTNNAYSYGEEHGFGRRLFIIYDGIHYDALAEAANETAPESDDVTVFNPSEKEKEILAKTVAADLKARNQYTDMGNASLKCMVCFKLLAGEKGALEHARATGHQNFGQV 395
BLAST of mRNA_H-elongata_contig18822.5146.1 vs. uniprot
Match: A0A835ZCY8_9STRA (Ubiquitin thioesterase OTU1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY8_9STRA) HSP 1 Score: 284 bits (727), Expect = 1.100e-84 Identity = 165/404 (40.84%), Postives = 226/404 (55.94%), Query Frame = 1
Query: 1 MPLNLKVTWGAGGS----SARMMGLVDDLTLGHLKELVATKSGIEPARIQLKAGFPPRDVSGSETDPVVELGIRSGSAITVLERKAPAPEQATIQPRTSSPVSSPTQE---------------------ALSEEGVRLLVDMGFPREYAARALEVAGGDINTALEICTGA-------EPPLFSSEGAYDAVGEAS-----RKVMVRRIIDADNSCLFNAIGYALRRKR--KVGFELRRMITEAVRGNPEVYNEGILGKLPGQYCTWISNPTSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEKEGHGRRVFVIYDGVHYDALAEAAREGAPEADDVTTFDPSAADKLNMAKAVAADLKLRNQFTDMGNADIKCMVCLKLLVGEKGALEHARATGHQNFGQV 1095
MP+NL+VTW S +++GL D TL LK V S I R + +GFPP++V+G + LGI +GSA++V + P+ P ++P A + L+DMGF AA+AL++AGGD A+E+C + S G+ +A G S R VRR++DADNSCLF ++GY + R+R K G +RR+IT+AVR P+ ++E ILG P YC WI NP WGGEIEL +LS + I VVDI T Y YGE +G+ +R+F++YDGVHYDA+AEA APE D T FD + K+ AK+VAA+LK + Q+ D+ D+KC+VC K L G+KGA +HA AT HQNFGQ+
Sbjct: 1 MPINLRVTWSKAEDGTRQSGKLLGLDDSTTLLQLKLAVEGISSIPADRQTILSGFPPKEVAGGTDAAITALGITNGSAVSVAQSTTATPDA----PAAATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHPGAATKDLIDMGFSPAVAAKALQLAGGDAAAAIELCLSGGLDDRDIASDIASGTGSANATGNNSATLEHRPTFVRRVVDADNSCLFTSVGYCVTRERGEKGGGRMRRVITQAVRAAPDTFSEAILGMQPEAYCGWIMNPEKWGGEIELVVLSDHYKLEICVVDIATGRTYLYGEDKGYSQRIFLLYDGVHYDAMAEAFSPNAPEDLDTTRFDITDDAKVEAAKSVAAELKRQKQYVDLAGCDLKCLVCGKGLQGQKGARDHAVATRHQNFGQI 400
BLAST of mRNA_H-elongata_contig18822.5146.1 vs. uniprot
Match: K8Z3P6_NANGC (Ubiquitin thioesterase OTU1 (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3P6_NANGC) HSP 1 Score: 281 bits (719), Expect = 5.870e-84 Identity = 162/382 (42.41%), Postives = 228/382 (59.69%), Query Frame = 1
Query: 1 MPLNLKVTWGAGGSSARMMGLVDDLTLGHLKELVATKSGIEPARIQLKAGFPPRDVSGSE-TDPVVELGIRSGSAITVLERKAPAPEQATIQPRTSSPVSSPTQEALSEEGVRLLVDMGFPREYAARALEVAGGDINTALEICTG-------------AEPPLFSSEGAYDAVGEASRKVMVRRIIDADNSCLFNAIGYALRRKRKVGFELRRMITEAVRGNPEVYNEGILGKLPGQYCTWISNPTSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEKEGHGRRVFVIYDGVHYDALAEAAREG-APEADDVTTFDPSAADKLNMAKAVAADLKLRNQFTDMGNADIKCMVCLKLLVGEKGALEHARATGHQNFGQVDS 1101
MPL LKV G GG SA + GL D TL L+ + G+ A+ +L+AGFPP+D++ + T + LGI++GSAITV++ Q T + PV+ P G + ++DMGF A +ALEV+ G++ AL++C A P +S G + +VMVRR+IDADNSCLFNA+GY + + R++G +LR++I + VR +P+VY E +LGK P QY WI +P WGGEIEL ILS+ + ++I++ +AY YGE + + RR++++YDGVHYDALA AA APE+ D+T F A AVAA+LK QF D+ ++CMVC K L G++ AL HAR T HQNFG+ S
Sbjct: 2 MPLTLKVN-GPGGKSAILKGLKDSATLQQLQIKIEELLGVPMAQQKLRAGFPPKDMTLQDLTAELTSLGIQTGSAITVVKEDT----QVTSGDKAPIPVTLP--------GAQQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTT----ANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYKS 366
BLAST of mRNA_H-elongata_contig18822.5146.1 vs. uniprot
Match: A0A6V1QB17_HETAK (Ubiquitin thioesterase OTU1 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QB17_HETAK) HSP 1 Score: 215 bits (548), Expect = 1.760e-61 Identity = 110/201 (54.73%), Postives = 137/201 (68.16%), Query Frame = 1
Query: 502 VRRIIDADNSCLFNAIGYALRRKRKVGFELRRMITEAVRGNPEVYNEGILGKLPGQYCTWISNPTSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEKEGHGRRVFVIYDGVHYDALAEAAR---EGAPEADDVTTFDPSAADKLNMAKAVAADLKLRNQFTDMGNADIKCMVCLKLLVGEKGALEHARATGHQNFGQV 1095
VRR+IDADNSCLFNA+GY R RK LRR+I V GNP+ + E ILGK P +Y +WI +P WGGEIEL+IL + A I VVDIQ+ N Y YG + +R F++YDGVHYDA+AEA E E DVT FD S +++ A VAA+LK RNQF ++ D+KC+VC + L G+ GALEHARAT HQNFGQ+
Sbjct: 6 VRRVIDADNSCLFNAVGYVFERNRKAAPRLRRLIANTVLGNPDKWTEAILGKPPHEYQSWIQDPQKWGGEIELAILCQFFASEIVVVDIQSLNTYKYGSE--FNQRAFLLYDGVHYDAMAEALESQGEKKSEDTDVTVFDSSDESRISAALDVAAELKARNQFVNLAGCDLKCLVCGRGLKGQAGALEHARATSHQNFGQI 204
BLAST of mRNA_H-elongata_contig18822.5146.1 vs. uniprot
Match: I0YIJ5_COCSC (Ubiquitin thioesterase OTU1 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YIJ5_COCSC) HSP 1 Score: 202 bits (515), Expect = 1.450e-56 Identity = 109/219 (49.77%), Postives = 137/219 (62.56%), Query Frame = 1
Query: 445 LFSSEGAYDAVGEASRKVMVRRIIDADNSCLFNAIGYALRRKRKVGFELRRMITEAVRGNPEVYNEGILGKLPGQYCTWISNPTSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEKEGHGRRVFVIYDGVHYDALAEAAREGAPEADDVTTFDP--SAADKLNMAKA-VAADLKLRNQFTDMGNADIKCMVCLKLLVGEKGALEHARATGHQNFGQ 1092
+ ++ A AV S V+VRR++ +DNSCLFNA+GY + R R LRR+I E V G+PE Y+E LGK +YC WI +P WGG IELSILS+ I D+QT YG+ G+ RV +IYDG+HYDALA AA EGAPE D+T FD S AD + A A + A QFTD N ++C VC + GEK ALEHA+ATGHQNFG+
Sbjct: 1 MHAAPPASVAVPGGSGSVVVRRVVASDNSCLFNAVGYVVERSRDKASHLRRVIAETVAGDPEEYSEAFLGKPNKEYCAWIKDPQKWGGAIELSILSRYFGREIAAYDVQTKRCDVYGQDAGYEERVMLIYDGLHYDALAVAAFEGAPEDVDITMFDTHGSEADSIGRAAAELVAKSHEARQFTDTANFTLRCGVCQLGVKGEKEALEHAKATGHQNFGE 219
BLAST of mRNA_H-elongata_contig18822.5146.1 vs. uniprot
Match: A0A2P6VPS1_9CHLO (Ubiquitin thioesterase OTU1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VPS1_9CHLO) HSP 1 Score: 205 bits (521), Expect = 2.870e-55 Identity = 146/406 (35.96%), Postives = 202/406 (49.75%), Query Frame = 1
Query: 1 MPLNLKVTWGAGGSSARMMGLVDDLTLGHLKELVATKSGIEPARIQLKAGFPPRDVS----GSETDPVVELGIRSGSAITVLERKAPAPEQATIQPRTSSPVSSPTQEALSEEGVRLLVDMGFPR-EYAARALEVAGGDINTALEICTGAEPPLF-------------------------SSEGAYDAVGEASRKV-------MVRRIIDADNSCLFNAIGYALRRKRKVGFELRRMITEAVRGNPEVYNEGILGKLPGQYCTWISNPTSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEKEGHGRRVFVIYDGVHYDALAEAAREGAPEADDVTTFDPSAADKLNMAKAVAADL-----KLRNQFTDMGNADIKCMVCLKLLVGEKGALEHARATGHQNFGQ 1092
M LNL+V G + ++ T ++L+A K+G+ R +++ GFPP+ + G T V LG++SG ++TV P A P ++ + A + G G E ARA+ ++ G AL A PP + G A + + RRIID+DNSCLFNA+GY + RK+ +LR++I +AV G+P +NE +LGK P +YC WI +P+ WGG IELSILS+ L I DIQT YG+ G+ RV +IYDG+HYDALA AA GAPE+ DVT PS+ + A AA L K R QFTD N ++C VC L GEK A+EHA+ +GH NF +
Sbjct: 1 MALNLRVRGPEGQVTLKVE---PSATAAEFRQLLADKTGVPADRQEVRGGFPPKPLQWPADGGAT--VASLGVQSGDSLTVTA----LPGSAAAAPGSNGXXXTA---AAASNGHPAAALAGLSEDEQLARAIALSMGQ---ALPDLPAAAPPXXXXXXXXXXXAPTLQRRVASPARAHPAGTGXXXXXXAAPTSIRLPDGTAVTRRIIDSDNSCLFNAVGYVTQHSRKLAPQLRQVIADAVLGDPFEWNEAVLGKEPAEYCRWIKDPSKWGGAIELSILSQHLKAEIAAFDIQTKRCDVYGQGAGYCERVMLIYDGLHYDALAVAAFHGAPESQDVTRL-PSSGPRCEAVMAGAAALTEAAHKAR-QFTDTANFTLRCGVCQIGLKGEKEAVEHAKTSGHTNFSE 389
BLAST of mRNA_H-elongata_contig18822.5146.1 vs. uniprot
Match: A0A2P6NQK6_9EUKA (Ubiquitin thioesterase OTU1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NQK6_9EUKA) HSP 1 Score: 202 bits (515), Expect = 3.310e-55 Identity = 133/362 (36.74%), Postives = 187/362 (51.66%), Query Frame = 1
Query: 7 LNLKVTWGAGGSSARMMGLVDDLTLGHLKELVATKSGIEPARIQ-LKAGFPPRDVSGSETDPVVELGIRSGSAITVLERKAPAPEQATIQPRTSSPVSSPTQEALSEEGVRLLVDMGFPREYAARALEVAGGDINTALEICTGAEPPLFSSEGAYDAVGEASRKVMVRRIIDADNSCLFNAIGYALR-RKRKVGFELRRMITEAVRGNPEVYNEGILGKLPGQYCTWISNPTSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEKEGHGRRVFVIYDGVHYDALAEAAREGAPEADDVTTFDPSAADKLNMAKAVAADLKLRNQFTDMGNADIKCMVCLKLLVGEKGALEHARATGHQNF 1086
LNL+V + GS + + + D L+ L+ +GI PA +Q + GFPP+++S S + GI+ IT+ R P TI TSS +S+ T + P + ++ D+ L S+G +VRR++D+DNSCLFN+IGY L R RKVG LR++I + + +P+ YNE ILGK +Y W+ TSWGG IELSIL+ I+ DI+T Y+YGE +G+ +RVF+IYDG+HYDA+A PE D+T F P N A + + +FTD G ++C VC L GEK ALEHA+ TGHQNF
Sbjct: 2 LNLRVRSSSKGS--QHVSIEPDKKFSDLQALIEQSTGI-PANLQKVLTGFPPKEISCSNDTTLQAAGIQGNDTITIQVRTEPI-STGTIP--TSSIISTAT--------------IAPPSKSERPKRDITITDVG------------LTPSDGT-----------VVRRVVDSDNSCLFNSIGYVLEGRDRKVGPRLRKIIVDTIASDPDEYNEAILGKTNTEYRNWLLKDTSWGGGIELSILADYYQCEISAFDIKTTKVYNYGEGKGYKQRVFLIYDGIHYDAMAFTFDPSFPEDMDITIFSPKDDAATNKAMKLVQEANKAREFTDTGGFSLRCGVCQTGLKGEKEALEHAKKTGHQNF 320
BLAST of mRNA_H-elongata_contig18822.5146.1 vs. uniprot
Match: E1ZSA6_CHLVA (Ubiquitin thioesterase OTU1 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZSA6_CHLVA) HSP 1 Score: 201 bits (511), Expect = 5.400e-55 Identity = 107/218 (49.08%), Postives = 136/218 (62.39%), Query Frame = 1
Query: 451 SSEGAYDAVGEASRKVMVRRIIDADNSCLFNAIGYALRRKRKVGFELRRMITEAVRGNPEVYNEGILGKLPGQYCTWISNPTSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEKEGHGRRVFVIYDGVHYDALAEAAREGAPEADDVTTFDPSAADKLNM----AKAVAADLKLRNQFTDMGNADIKCMVCLKLLVGEKGALEHARATGHQNFGQ 1092
+ +GA AV A +VRRIID+DNSCLFNA+GY R RK+ LR++I +AV +P +NE +LGK P +YC WI +P WGG IELSILS+ L I DIQT YG+ G+ RV +IYDG+HYDALA AA EGAPE DVT P++ + M AK +A + FTD N ++C VC L GEK A+EHA+ TGH NF +
Sbjct: 79 AQQGAPTAVALADGTAVVRRIIDSDNSCLFNAVGYVTERSRKLAPRLRQVIADAVLADPFEWNEAVLGKEPAEYCRWIKDPNKWGGAIELSILSRHLGREIAAFDIQTTRVDIYGQGSGYSERVMLIYDGLHYDALAVAAFEGAPEQLDVTVI-PTSGTRTEMVMQGAKQLATKAQTARAFTDTANFTLRCGVCQIGLKGEKEAVEHAKTTGHTNFSE 295
BLAST of mRNA_H-elongata_contig18822.5146.1 vs. uniprot
Match: M4BZ26_HYAAE (Ubiquitin thioesterase OTU1 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BZ26_HYAAE) HSP 1 Score: 199 bits (505), Expect = 3.560e-54 Identity = 121/367 (32.97%), Postives = 180/367 (49.05%), Query Frame = 1
Query: 7 LNLKVTWGAGGSSARMMGLVDDLTLGHLKELVATKSGIEPARIQLKAGFPPRDVSGSETDPVVELGIRSGSAITVLERKAPAPEQATIQPRTSSPVSSPTQEALSEEGVRLLVDMGFPREYAARALEVAGGDINTALEICTGAEPPLFSSEGAYDAVGEASRKVMVRRIIDADNSCLFNAIGYALRRKRKVG--FELRRMITEAVRGNPEVYNEGILGKLPGQYCTWISNPTSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEKEGHGRRVFVIYDGVHYDALAEAAREGAPEADDVTTFDPSAADKLNMAKAVAADLKLRNQFTDMGNADIKCMVCLKLLVGEKGALEHARATGHQNFGQVDS 1101
+N KVT+ A G+S +++GL DD+TL L+ + K+ IEP + G+PP+ + G + LG+R+GS + + E P+TS S T V +RR++ ADNSCLF++IGYALR+ R+ G +R +I + + NPE Y+E LG+ +YC WI + SWGGEIELSILS V + V D+ + + YGE +G +R+F++YDG+HYD + E+ A E DVT F + K+ A VA + R++FTD+ I C+ C VG++ AL H+ TGHQ FG++ S
Sbjct: 1 MNFKVTF-ADGTSTKLLGLPDDVTLDGLRAHLFEKTSIEPQDQHVMMGYPPKMIEGPGESTLSSLGVRTGSMLVLKEA-----------PKTSCTQSKATS--------------------------------------------------------------VFMRRVMPADNSCLFHSIGYALRKTREEGGSSRMRELIRDTILANPEEYSEVFLGRPVYEYCAWIMDDKSWGGEIELSILSTYYNVEMVVFDVTSMSRLCYGEDQGFTQRMFLLYDGIHYDLVVESPSSTASERHDVTLFAINDFTKVERASEVAVEAHQRHEFTDVNRFSIMCLECRSTFVGQREALSHSTTTGHQRFGEIKS 293
BLAST of mRNA_H-elongata_contig18822.5146.1 vs. uniprot
Match: A0A8J9SFF6_9CHLO (Probable ubiquitin thioesterase OTU1 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SFF6_9CHLO) HSP 1 Score: 202 bits (513), Expect = 4.080e-54 Identity = 141/393 (35.88%), Postives = 196/393 (49.87%), Query Frame = 1
Query: 28 GAGGSSARMMGLVDDLTLGHLKELVATKSGIEPARIQLKAGFPPRDVS----GSETDPVVELGIRSGSAITVLERKAPAPEQATI------QPRTSSPVSSPTQEALSEEGVRLLVDMG----------------------FPREYAARALEVAGGDI--NTALEICTGAEPPLFSSEGAYDAVGEASRKVMVRRIIDADNSCLFNAIGYALRRKRKVGFELRRMITEAVRGNPEVYNEGILGKLPGQYCTWISNPTSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEKEGHGRRVFVIYDGVHYDALAEAAREGAPEADDVTTFDPSAADKLNMAKAVAADLKLRN----QFTDMGNADIKCMVCLKLLVGEKGALEHARATGHQNFGQ 1092
G G S + GL L+L +E++A K+G+ + +L GFPP +S GS T + +L I +G I V R+ A++ QP S + E + +G AA EV D+ N A E + P + A AV +VRR I +DNSCLFNA+GY + R+ LR++I E V G+PE Y+E LGK +YC WI + WGG IELSIL++ I D+QT YG+ G+ RV +IY+G+HYDALA AA EGAPE D+T F+ A+ + +A AA+L ++ QFTD N ++C+VC + GEK AL HA+ATGHQNFG+
Sbjct: 7 GPSGQST-LSGLDGGLSLSDFQEMLAEKTGVPASHQELLGGFPPAPISLPAGGSCT--LGDLPIANGDTIVVRRREISTVAAASVATTADEQPAQQSAEQRAQAQEDEELARAIAASLGDDASSVPAPXXXXXXXXXXXXXXXXXXAALRGEVEAADVASNAASESTS---QPAHIAPPASVAVPGGGGSAVVRRTIASDNSCLFNAVGYVMEHSRQHAARLRQIIAETVAGDPEEYSEAFLGKPNQEYCRWIKDSQKWGGAIELSILARYFGREIAAYDVQTKRCDLYGQDAGYSERVMLIYNGLHYDALAVAAFEGAPEDVDITMFEAKGAEADAIGRA-AAELVAKSHKARQFTDTANFTLRCLVCQLGVKGEKEALLHAKATGHQNFGE 392 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18822.5146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18822.5146.1 >prot_H-elongata_contig18822.5146.1 ID=prot_H-elongata_contig18822.5146.1|Name=mRNA_H-elongata_contig18822.5146.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=371bp MPLNLKVTWGAGGSSARMMGLVDDLTLGHLKELVATKSGIEPARIQLKAGback to top mRNA from alignment at H-elongata_contig18822:484..5862- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18822.5146.1 ID=mRNA_H-elongata_contig18822.5146.1|Name=mRNA_H-elongata_contig18822.5146.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5379bp|location=Sequence derived from alignment at H-elongata_contig18822:484..5862- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18822:484..5862- >mRNA_H-elongata_contig18822.5146.1 ID=mRNA_H-elongata_contig18822.5146.1|Name=mRNA_H-elongata_contig18822.5146.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2226bp|location=Sequence derived from alignment at H-elongata_contig18822:484..5862- (Himanthalia elongata Himel1 dioecious)back to top |