prot_H-elongata_contig1880.5139.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1880.5139.1
Unique Nameprot_H-elongata_contig1880.5139.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig1880.5139.1 vs. uniprot
Match: A0A7S2SU98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU98_9STRA)

HSP 1 Score: 104 bits (259), Expect = 5.270e-24
Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 0
Query:    3 PGEHPLEGVPNMENLAAPEALS--AKVDLSEVQGLNNLFGEYITRCLYSKTWSLREAAIIKIKLMLPSLEEDPGINSALTEMCQVLRVGFEDKIAQ 96
            PG HPLEGVP  E L +PE LS  +  + ++V GL  LFG+Y  RCL SK W+LREAAIIK KL++P L  D G+ + L   CQVL++G  DKIAQ
Sbjct:  269 PGPHPLEGVPGFEELPSPEPLSPTSAGEATDVNGLLQLFGDYRVRCLVSKQWNLREAAIIKAKLLMPELIRDGGLANILQPFCQVLKLGVADKIAQ 364          
BLAST of mRNA_H-elongata_contig1880.5139.1 vs. uniprot
Match: A0A7S2SU62_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU62_9STRA)

HSP 1 Score: 104 bits (259), Expect = 6.830e-24
Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 0
Query:    3 PGEHPLEGVPNMENLAAPEALS--AKVDLSEVQGLNNLFGEYITRCLYSKTWSLREAAIIKIKLMLPSLEEDPGINSALTEMCQVLRVGFEDKIAQ 96
            PG HPLEGVP  E L +PE LS  +  + ++V GL  LFG+Y  RCL SK W+LREAAIIK KL++P L  D G+ + L   CQVL++G  DKIAQ
Sbjct:  269 PGPHPLEGVPGFEELPSPEPLSPTSAGEATDVNGLLQLFGDYRVRCLVSKQWNLREAAIIKAKLLMPELIRDGGLANILQPFCQVLKLGVADKIAQ 364          
BLAST of mRNA_H-elongata_contig1880.5139.1 vs. uniprot
Match: D7FPV5_ECTSI (TOG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV5_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.760e-23
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    1 FSPGEHPLEGVPNM--ENLAAPEALSAKVDLSEVQGLNNLFGEYITRCLYSKTWSLREAAIIKIKLMLPSLEE 71
            + PG HPLEGVP++  E+LA PE LSAKVDLSEVQGLNNL G+Y+TRCLYSKTWSLREAA++K+ L    L E
Sbjct:  399 YPPGAHPLEGVPDLDLEDLAEPEPLSAKVDLSEVQGLNNLLGDYLTRCLYSKTWSLREAAVLKVFLTTLDLLE 471          
BLAST of mRNA_H-elongata_contig1880.5139.1 vs. uniprot
Match: A0A835ZFJ3_9STRA (TOG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFJ3_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 9.430e-19
Identity = 50/96 (52.08%), Postives = 57/96 (59.38%), Query Frame = 0
Query:    1 FSPGEHPLEGVPNMENLAAPEALSAKVDLSEVQGLNNLFGEYITRCLYSKTWSLREAAIIKIKLMLPSLEEDPGINSALTEMCQVLRVGFEDKIAQ 96
            F+ GEHPL GVPN+ +L  PE L  KVD SEVQGL  + GEY+ RCLYS+ W+LREAA IK                       VLRVG EDKIAQ
Sbjct:  421 FAGGEHPLRGVPNLGDLPVPEPLLLKVDSSEVQGLIAVLGEYVARCLYSRAWTLREAAAIK-----------------------VLRVGCEDKIAQ 493          
BLAST of mRNA_H-elongata_contig1880.5139.1 vs. uniprot
Match: A0A7S2GCC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCC0_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 9.480e-18
Identity = 48/89 (53.93%), Postives = 56/89 (62.92%), Query Frame = 0
Query:   15 ENLAAPEALSAKVDLSEVQG-------LNNLFGEYITRCLYSKTWSLREAAIIKIKLMLPSLEEDPGINSALTEMCQVLRVGFEDKIAQ 96
            E+L  PE L+A    ++  G       L NL GEY+ RC+ SK WSLREAAIIK+KLMLP L  DPG  S L  +  VLR G EDKIAQ
Sbjct:    2 EDLPVPEPLAASGGGADNAGGPANDTELLNLVGEYLVRCIMSKQWSLREAAIIKMKLMLPDLCTDPGAGSILQPLANVLRGGIEDKIAQ 90          
BLAST of mRNA_H-elongata_contig1880.5139.1 vs. uniprot
Match: A0A0G4EPI2_VITBC (TOG domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EPI2_VITBC)

HSP 1 Score: 86.7 bits (213), Expect = 1.140e-17
Identity = 48/97 (49.48%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    1 FSPGEHPLEGVPNMENLAAPEALSAKVDLSEVQGLNNLFGEYITRCLYSKTWSLREAAIIKIKLMLPS-LEEDPGINSALTEMCQVLRVGFEDKIAQ 96
            F P +HPL GVPN+E L APE +S      E   L +LFGEY+ RCLYSKTW LREAA++K+ L   + L  D      L  +C VL+    DKIAQ
Sbjct:  439 FPPDKHPLRGVPNVEELPAPEGISPSFS-KEAGPLIDLFGEYLIRCLYSKTWHLREAAVLKLDLDFNAGLFGDFNTRQFLEGLCVVLKRAISDKIAQ 534          
BLAST of mRNA_H-elongata_contig1880.5139.1 vs. uniprot
Match: A0A1Q9DQR6_SYMMI (Centrosomal protein of 104 kDa n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DQR6_SYMMI)

HSP 1 Score: 74.7 bits (182), Expect = 1.750e-13
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    1 FSPGEHPLEGVPNMENLAAPEALSAKVDLSEVQGLNNLFGEYITRCLYSKTWSLREAAIIKIKLMLPSLEEDP 73
            F   +HPL GVPN+E+L+ PE L++     E + L  LFGEY+T C+YSK WSLR+AA+ K+ L L + E  P
Sbjct:  464 FDAADHPLSGVPNVEDLSQPEPLNSNFQ-KEAEPLIQLFGEYLTNCVYSKAWSLRDAALQKLTLDLQNGEHQP 535          
BLAST of mRNA_H-elongata_contig1880.5139.1 vs. uniprot
Match: A0A812JV20_SYMPI (CEP104 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812JV20_SYMPI)

HSP 1 Score: 73.6 bits (179), Expect = 4.210e-13
Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 0
Query:    1 FSPGEHPLEGVPNMENLAAPEALSAKVDLSEVQGLNNLFGEYITRCLYSKTWSLREAAIIKIKLML--PSLEEDPGINSALTEMCQVLRVGFEDKIAQ 96
            F   +HPL GVPN+E+L+ PE L++   L E + L  LFGEY+T C+YSK WSLR+AA+ K+ L L     E      S L     VL+    DK  Q
Sbjct:   55 FDAADHPLSGVPNVEDLSQPEPLNSSF-LKEAEPLIELFGEYLTNCVYSKAWSLRDAALQKLTLDLNGEQSENQSKDQSRLAGYVVVLKRMVPDKNVQ 151          
BLAST of mRNA_H-elongata_contig1880.5139.1 vs. uniprot
Match: A0A812P6C3_9DINO (CEP104 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812P6C3_9DINO)

HSP 1 Score: 73.6 bits (179), Expect = 4.580e-13
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    1 FSPGEHPLEGVPNMENLAAPEALSAKVDLSEVQGLNNLFGEYITRCLYSKTWSLREAAIIKIKLML 66
            F   +HPL GVPN+E+L+ PE L++     E + L  LFGEY+T C+YSKTWSLR+AA+ K+ L L
Sbjct:  411 FDAADHPLSGVPNVEDLSQPEPLNSSFQ-KEAEPLIELFGEYLTNCVYSKTWSLRDAALQKLTLDL 475          
BLAST of mRNA_H-elongata_contig1880.5139.1 vs. uniprot
Match: A0A7R9Y8Y5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Y5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 8.060e-13
Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 0
Query:    4 GEHPLEGVPNMENLAAPEALSAKVDLSEVQGLNNLFGEYITRCLYSKTWSLREAAIIKIKLMLPSLE-EDPGINSALTEMCQVLRVGFEDKIAQAS 98
            G HPLEGV N + L  PE L+A  + S       ++GEY+TRCL S TW LR+ A++K  L++P+   ED  +   L     ++  G  DKIAQ +
Sbjct:   87 GPHPLEGVENYQELPEPEPLTAPEEFSSWV---RVYGEYVTRCLRSATWQLRDVALLKTSLVVPTYAAEDGSLGELLPVSLGIVLNGLRDKIAQVA 179          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1880.5139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2SU98_9STRA5.270e-2455.21Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2SU62_9STRA6.830e-2455.21Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D7FPV5_ECTSI1.760e-2369.86TOG domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZFJ3_9STRA9.430e-1952.08TOG domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2GCC0_9STRA9.480e-1853.93Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A0G4EPI2_VITBC1.140e-1749.48TOG domain-containing protein n=2 Tax=Vitrella bra... [more]
A0A1Q9DQR6_SYMMI1.750e-1349.32Centrosomal protein of 104 kDa n=1 Tax=Symbiodiniu... [more]
A0A812JV20_SYMPI4.210e-1343.88CEP104 protein n=1 Tax=Symbiodinium pilosum TaxID=... [more]
A0A812P6C3_9DINO4.580e-1353.03CEP104 protein n=1 Tax=Symbiodinium natans TaxID=8... [more]
A0A7R9Y8Y5_9STRA8.060e-1340.63Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 31..101
e-value: 4.6E-5
score: 25.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1880contigH-elongata_contig1880:303..1916 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1880.5139.1mRNA_H-elongata_contig1880.5139.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1880 303..1916 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1880.5139.1 ID=prot_H-elongata_contig1880.5139.1|Name=mRNA_H-elongata_contig1880.5139.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
FSPGEHPLEGVPNMENLAAPEALSAKVDLSEVQGLNNLFGEYITRCLYSK
TWSLREAAIIKIKLMLPSLEEDPGINSALTEMCQVLRVGFEDKIAQASRQ
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like