mRNA_H-elongata_contig188.5137.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig188.5137.1
Unique NamemRNA_H-elongata_contig188.5137.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig188.5137.1 vs. uniprot
Match: D7FY19_ECTSI (Sorting and Assembly Machinery 35kDa protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY19_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 1.050e-112
Identity = 193/319 (60.50%), Postives = 226/319 (70.85%), Query Frame = 1 
Query:    1 RYWCLLRIGPDQQ---PVIARGSEMDLMIVVQFRPAWEIQAYLRFARLAYRVENSLYMGSEATGLYPALVDGQYVLPADHATGHIARKRKDLDRNLTEEEKAETRAFSLTVREGLQPLLRVLRYRANEGEVQQTVHPPMKRTLPWPLSAWSPGAEDRRSRGESDLRGFSGLDKDDLIGRACKLYADLDLRLGR-KDAYFFGATPTSLDACVFGHLAEAWTIPVLLDLLPAFDNLSRFFRRVCDNFFRPDSFPNASGVGDPAGDADVIAQGGVTESKGSESDEPEGVVGEDIGGMGGSGVLRETRMRADYVNSLNAFNQL 945
            R W  +   PD +   PVI  GS +D+M+V QFRPAWEIQA+LRF RL YRVENS YMGS ATGLYPAL DGQ+VL ++ A GHIA +R D+D  LTE EK E +A ++ VREGLQPLLRV+RY  +EGEV+QTVHPPMK+ L WPLS WSP AE RRS+ ES +RG   L K +LIGRA ++YA LDLRLG  K+A+FFG+ PTS+DA VFGHLAEAWTI VLLDLLPAFDNLSR FR VCDN+FRP SFP  S  G+           GV ESK S S++                 LR+  +RADYVNS NAFNQL
Sbjct:   23 RSWGRIEEQPDLEQPGPVITHGSALDVMVVTQFRPAWEIQAHLRFVRLPYRVENSSYMGSAATGLYPALTDGQFVLRSEDAAGHIASRRSDVDVGLTEAEKVEAQALAMLVREGLQPLLRVMRYMGDEGEVRQTVHPPMKKALSWPLSWWSPAAEGRRSKRESAVRGLDRLSKAELIGRAKEMYAALDLRLGNSKEAFFFGSRPTSVDAVVFGHLAEAWTIAVLLDLLPAFDNLSRLFRHVCDNYFRPGSFPPPSSGGE-----------GVAESKKSGSEDR----------------LRDAMLRADYVNSHNAFNQL 314
[Close]
BLAST of mRNA_H-elongata_contig188.5137.1 vs. uniprot
Match: A0A835ZEI3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI3_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.970e-40
Identity = 99/248 (39.92%), Postives = 139/248 (56.05%), Query Frame = 1 
Query:   34 QQPVIARGSEMDLMIVVQFRPAWEIQAYLRFARLAYRVENSLYMGSEATGLYPALVDGQYVLPADHATGHIARKRKDLDRNLTEEEKAETRAFSLTVREGLQPLLRVLRYRANEGEVQQTVHPPMKRTLPWPLSAWSPGAEDRRSR-------GESDLRGFSGLDKDD-------LIGRACKLYADLDLRLGRKDAYFFGATPTSLDACVFGHLAEAWTIPVLLDLLPAFDNLSRFFRRVCDNFFRPD 735
            Q  V    +  +  +++QFRPAW  QAYLRF+ + +R+ENS +  SE TG YP L DG ++LP      H+   R+DLD NLT  E+A+  AF+  V++ L PLL  +R+ A+E +V++TV  PM+R LP PL    P  E R +        G S++RG     +D+       L+  A + YA L+ RLG K  YFFGA P +LDA VFGHLA A     L  ++P      +FF  V  ++F  D
Sbjct:   28 QSQVRLGNASSNPPVLIQFRPAWTEQAYLRFSGIPHRLENSRFASSEVTGTYPQLQDGHFLLPGGAIVQHLTTYRRDLDSNLTGLERADAVAFAAVVKDVLAPLLEAIRWSADERDVRRTVERPMRRALPPPLRYVVPWLESRAAIANAAAACGHSNVRGSQAEGRDEKGVPLEQLLESAKRHYAALNARLGDKAPYFFGAAPCTLDAIVFGHLAAALADVTLAPVVP------QFFNNVVASYFCSD 269
[Close]
BLAST of mRNA_H-elongata_contig188.5137.1 vs. uniprot
Match: W7TNF1_9STRA (Metaxin 1 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNF1_9STRA)

HSP 1 Score: 152 bits (383), Expect = 9.170e-36
Identity = 111/312 (35.58%), Postives = 154/312 (49.36%), Query Frame = 1 
Query:   31 DQQPVIARGSEMDLMIVVQFRPAWEIQAYLRFARLAYRVENSLYMGSEATGLYPALVDGQYVLPADHATGHIARKRK--DLDRNLTEEEKAETRAFSLTVREGLQPLLRVLRYRANEGEVQQTVHPPMKRTLPWPLSAWSPGAEDRRSRGESDLRGFS--GLDKDDLIGRACKLYADLDLRLGRKDA-YFFGATPTSLDACVFGHLAEAWTIPVLLDLLPAFDNLSRFFRRVCDNFFRPDSFPNASGVGDPAGDADVIAQGGVTESKGSESDEPEGV-VGEDIGGMGGSGVLRETRMRADYVNSLNAFNQLE 948
            +  P+ A        +++QFRPA+ +Q YLRF R  Y V N  Y   E  G  P L+DGQ++LP + A G++       DLD  L+   +A+  A    VRE L P +   RYR +E    Q V   + R   +PL      AE RR   E   RG +  G+   +++ RA  +Y +LD  LG     +FFG  PTS DAC+FGHLAEA     +L L+  FDNL RFF R+ ++FF          VG  A  +       ++ S G    EP+G  +  D         L+E    ADY+N+ N FNQ+E
Sbjct:   61 EPTPIKAHAERSYPFVLLQFRPAFALQLYLRFVRAPYVVRNLEYPVLETVGQLPVLMDGQFLLPEEDALGYLREHYPALDLDAKLSGARRAQVLALHALVREKLAPAVGASRYR-DERNFVQNVRAVILRATRFPLGPAISTAERRRGMQEQRWRGLADGGMGVGEVLTRAQCVYRELDNLLGASTGDFFFGREPTSFDACLFGHLAEALADVNVLVLVSTFDNLMRFFGRIAEDFFN---------VGAQAAASXXXXXXXLSASLGGPVREPQGFSIASD---------LKECYRHADYMNNRNPFNQVE 353
[Close]
BLAST of mRNA_H-elongata_contig188.5137.1 vs. uniprot
Match: A0A1V9ZH69_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZH69_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.540e-25
Identity = 81/238 (34.03%), Postives = 126/238 (52.94%), Query Frame = 1 
Query:   31 DQQPVIARGSEMDL---MIVVQFRPAWEIQAYLRFARLAYRVENSLYMGSEATGLYPALVDGQYVLPADHATGHIARKRKDLDRNLTEEEKAETRAFSLTVREGLQPLLRVLRYRANEGEVQQTVHPPMKRTLPWPLSAWSPGAEDRRSRGESDLRGFSGLDKDDLIGRACKLYADLDLRLGR-KDA-YFFGATPTSLDACVFGHLAEAWTIPVLLDLLPAFDN-LSRFFRRVCDNFF 726
            D+   +A  + ++L    +++QF PAW++QAYLRFA++   ++N+ Y   EATG  P L DG Y+L  D    H+    KD+D  L + +K E+ AF   V+E L  +L   R+  +    ++   P ++R LP+PLS   P              G+   ++  +  R C  Y+ L+ RL   KD  YF+G+TPTSLDA VFGHL +A +   L D++    + L  F   + D +F
Sbjct:   33 DESSRVAPKTSLELGSTPVLLQFMPAWDVQAYLRFAKIGMHIKNAKYPSFEATGELPQLNDGHYLLGKDDIIMHLQTYHKDIDMELNDVQKGESLAFKSMVQEKLHRVLLYCRW-VDPITYKEVTRPAVQRVLPFPLSRILPKQMHVSITNMLAANGYETQEQVYITARDC--YSALNARLESVKDGPYFYGSTPTSLDALVFGHLVDALSDVQLRDVVHIHGSRLITFAEHIRDTYF 267
[Close]
BLAST of mRNA_H-elongata_contig188.5137.1 vs. uniprot
Match: A0A067D0U6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D0U6_SAPPC)

HSP 1 Score: 118 bits (296), Expect = 5.180e-25
Identity = 76/219 (34.70%), Postives = 117/219 (53.42%), Query Frame = 1 
Query:   16 LRIGPDQQPVIARGSEMDLMIVVQFRPAWEIQAYLRFARLAYRVENSLYMGSEATGLYPALVDGQYVLPADHATGHIARKRKDLDRNLTEEEKAETRAFSLTVREGLQPLLRVLRYRANEGEVQQTVHPPMKRTLPWPLSAWSPGAEDRRSRGESDLRGFSGLDKDDLIGRACKLYADLDLRLGRKDAYFFGATPTSLDACVFGHLAEAWTIPVLLDLL 672
            LR+ P     +  G +  L    QF PA+++QAY+RFA++   ++N+ Y   EATG  P L DG Y+L  D    H+     D+D +L+  +K E+ AF   V+E LQ +L   R+  +    ++   P ++R LP+PL+   P         E    G++  ++  +  R C  YA L+ RLG    +F+GA PTSLDA VFGHL +A +   L D++
Sbjct:   36 LRVPPKTSAELGPGCQPTLH---QFLPAYDVQAYVRFAKIPLHIKNAKYPSFEATGELPQLRDGHYLLAKDDIIMHLQTYHTDIDGHLSAVQKGESLAFKSMVQEKLQRVLHYCRW-VDPITYKEVTRPAVQRVLPFPLNRVLPKKMHHAMTSELATAGYASQEQVYVAARDC--YAALNARLG-DGPFFYGAAPTSLDAIVFGHLVDALSDVQLRDVV 247
[Close]
BLAST of mRNA_H-elongata_contig188.5137.1 vs. uniprot
Match: A0A1V9ZT46_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZT46_9STRA)

HSP 1 Score: 115 bits (287), Expect = 7.030e-24
Identity = 75/220 (34.09%), Postives = 114/220 (51.82%), Query Frame = 1 
Query:   16 LRIGPDQQPVIARGSEMDLMIVVQFRPAWEIQAYLRFARLAYRVENSLYMGSEATGLYPALVDGQYVLPADHATGHIARKRKDLDRNLTEEEKAETRAFSLTVREGLQPLLRVLRYRANEGEVQQTVHPPMKRTLPWPLSAWSPGAEDRRSRGESDLRGFSGLDKDDLIGRACKLYADLDLRL-GRKDAYFFGATPTSLDACVFGHLAEAWTIPVLLDLL 672
            LR+ P     +  G    L    QF PAW++QAY+RFA +   ++N+ Y   EATG  P L DG Y+L  D    H+    KD+D +LT+ +K E+ AF   V+E L  +L   R+  +    ++   P + R LP+PLS   P         +    G+   ++  +  R C  Y+ L+ RL      YFFG++P++LDA VFGHL +A +   L D++
Sbjct:   36 LRVPPKTSLELGPGVAPTLH---QFLPAWDVQAYVRFAEIPLHIKNAKYPSFEATGELPQLRDGHYLLGKDDIIMHLQTYHKDIDASLTDAQKGESLAFKAMVQEKLHRVLLYCRW-VDPITYKEVTRPAITRVLPFPLSRILPKQMHSSMAAKLAAAGYETQEQVYIAARDC--YSALNARLEASAGPYFFGSSPSALDAVVFGHLVDALSDVQLRDVV 249
[Close]
BLAST of mRNA_H-elongata_contig188.5137.1 vs. uniprot
Match: A0A3M6VA82_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA82_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.120e-22
Identity = 66/193 (34.20%), Postives = 106/193 (54.92%), Query Frame = 1 
Query:   67 DLMIVVQFRPAWEIQAYLRFARLAYRVENSLYMGSEATGLYPALVDGQYVLPADHATGHIARKRKDLDRNLTEEEKAETRAFSLTVREGLQPLLRVLRYRANEGEVQQTVHPPMKRTLPWPLSAWSPGAEDRRSRGESDLRGFSGLDKDDLIGRACKLYADLDLRL-GRKDAYFFGATPTSLDACVFGHLAEA 642
             ++++ QF PAW+IQAYLR A +   V NS Y   EATG  P L DG ++LP +    H+    KD+D  L++ +++E+ A+   + E LQ ++   R+  +    ++   P MKR +P+PL+ + P      +  +  L G S  ++  +I R C  Y  L+ +L      YFFG  P++LD  VFGH+ +A
Sbjct:   39 SVLVLHQFLPAWDIQAYLRVAGICLHVHNSKYPIYEATGALPQLSDGNFLLPKEEIIMHLQTFHKDIDDFLSDAQRSESYAYRSMLSEKLQRVVLYCRW-VDSSTYREVTRPHMKRNIPFPLNLFLPKKMHLETMEKLRLYGISTKEQAYVIARDC--YTALNTKLESAGTCYFFGNQPSALDVAVFGHIVDA 228
[Close]
BLAST of mRNA_H-elongata_contig188.5137.1 vs. uniprot
Match: V9E996_PHYPR (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=V9E996_PHYPR)

HSP 1 Score: 110 bits (275), Expect = 2.540e-22
Identity = 65/191 (34.03%), Postives = 106/191 (55.50%), Query Frame = 1 
Query:   73 MIVVQFRPAWEIQAYLRFARLAYRVENSLYMGSEATGLYPALVDGQYVLPADHATGHIARKRKDLDRNLTEEEKAETRAFSLTVREGLQPLLRVLRYRANEGEVQQTVHPPMKRTLPWPLSAWSPGAEDRRSRGESDLRGFSGLDKDDLIGRACKLYADLDLRLGRKDA-YFFGATPTSLDACVFGHLAEA 642
            +++ QF PAW++QAYLR A +   V NS Y   EATG  P L DG ++LP +    H+    KD+D  LT+++++E+ A+   + E LQ ++   R+  +    ++   P MKR +P+PL+ + P      +  +  + G S  ++  +I R C  Y  L+ +L      YFFG  P++LD  VFGH+ +A
Sbjct:   41 LVLHQFLPAWDVQAYLRVAGIRLHVHNSKYPTYEATGELPQLSDGNFLLPKEEIIMHLQTFHKDIDEFLTDQQRSESYAYRSMLSEKLQRVMMYCRW-VDSATYREVTRPHMKRHIPFPLNLFLPKKMHLDTMEKLRMYGISTKEQAYVIARDC--YTALNTKLESAGTPYFFGDQPSALDVAVFGHVVDA 228
[Close]
BLAST of mRNA_H-elongata_contig188.5137.1 vs. uniprot
Match: A0A421GM55_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GM55_9STRA)

HSP 1 Score: 108 bits (271), Expect = 5.260e-22
Identity = 64/191 (33.51%), Postives = 103/191 (53.93%), Query Frame = 1 
Query:   73 MIVVQFRPAWEIQAYLRFARLAYRVENSLYMGSEATGLYPALVDGQYVLPADHATGHIARKRKDLDRNLTEEEKAETRAFSLTVREGLQPLLRVLRYRANEGEVQQTVHPPMKRTLPWPLSAWSPGAEDRRSRGESDLRGFSGLDKDDLIGRACKLYADLDLRLGRKDA-YFFGATPTSLDACVFGHLAEA 642
            +++ QF PAW++QAYLR A +   V NS Y   EATG  P L DG ++LP +    H+     D+D  LT+ +++E+ A+   + E LQ ++   R+  N    ++   P MKR +P+PL+ + P      +  +    G +  ++  +I R C  Y  L+ +L      YFFG  P++LD  VFGH+ +A
Sbjct:   41 LVLHQFLPAWDVQAYLRVAGIRLHVHNSKYPAYEATGELPQLSDGNFLLPKEEIIMHLQTFHTDIDEFLTDAQRSESYAYRSMLSEKLQRVMLYCRW-VNSSTYREVTRPHMKRHIPFPLNLFLPKKIHMETMEKLRSYGINSKEQAYVIARDC--YTALNTKLESSSLPYFFGDKPSALDVAVFGHIVDA 228
[Close]
BLAST of mRNA_H-elongata_contig188.5137.1 vs. uniprot
Match: A0A662WHC2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHC2_9STRA)

HSP 1 Score: 109 bits (273), Expect = 5.700e-22
Identity = 66/191 (34.55%), Postives = 105/191 (54.97%), Query Frame = 1 
Query:   73 MIVVQFRPAWEIQAYLRFARLAYRVENSLYMGSEATGLYPALVDGQYVLPADHATGHIARKRKDLDRNLTEEEKAETRAFSLTVREGLQPLLRVLRYRANEGEVQQTVHPPMKRTLPWPLSAWSPGAEDRRSRGESDLRGFSGLDKDDLIGRACKLYADLDLRLG-RKDAYFFGATPTSLDACVFGHLAEA 642
            +++ QF PAW++QAYLR A +   V NS Y   EATG  P L DG ++LP +    H+    +D+D  LT+E+++ + AF   + E LQ ++   R+  +    ++   P MKR +P+PL+ + P      +  +    G S  ++  +I R C  Y  L+ +L     AYFFG  P++LD  VFGH+ +A
Sbjct:   41 LVLHQFLPAWDVQAYLRVAGIRLHVHNSRYPTYEATGELPQLSDGNFLLPKEQIIMHLQTFHEDIDAFLTDEQRSASFAFRSMLSEKLQRVMLFCRW-VDSATYREVTRPHMKRHIPFPLNLFLPKKMHLETMEKLRSYGISSKEQAYVIARDC--YTALNTKLECAGSAYFFGDKPSALDVAVFGHIVDA 228
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188.5137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY19_ECTSI1.050e-11260.50Sorting and Assembly Machinery 35kDa protein n=2 T... [more]
A0A835ZEI3_9STRA4.970e-4039.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TNF1_9STRA9.170e-3635.58Metaxin 1 n=5 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
A0A1V9ZH69_9STRA1.540e-2534.03Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067D0U6_SAPPC5.180e-2534.70Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9ZT46_9STRA7.030e-2434.09Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A3M6VA82_9STRA2.120e-2234.20Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
V9E996_PHYPR2.540e-2234.03Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A421GM55_9STRA5.260e-2233.51Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A662WHC2_9STRA5.700e-2234.55Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig188contigH-elongata_contig188:3609..11785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.0
Seed ortholog evalue3.1e-93
Seed eggNOG ortholog2880.D7FY19
Preferred nameMTX2
KEGG koko:K03351,ko:K17776
KEGG Pathwayko04110,ko04111,ko04113,ko04114,ko04120,ko04914,ko05166,map04110,map04111,map04113,map04114,map04120,map04914,map05166
KEGG ModuleM00389
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0008104,GO:0008150,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0019867,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070013,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072655,GO:0098588,GO:0098805
EggNOG free text desc.Metaxin 2
EggNOG OGsKOG3027@1,KOG3027@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03029,ko03036,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSorting and Assembly Machinery 35kDa protein
Ec32 orthologEc-08_004730.1
Exons10
Model size2327
Cds size1239
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig188.5137.1prot_H-elongata_contig188.5137.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig188 4634..11722 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930074.9804194-UTR-H-elongata_contig188:3608..46331622930074.9804194-UTR-H-elongata_contig188:3608..4633Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig188 3609..4633 -
1691679271.0499458-UTR-H-elongata_contig188:3608..46331691679271.0499458-UTR-H-elongata_contig188:3608..4633Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig188 3609..4633 -
1622930075.1638176-UTR-H-elongata_contig188:11722..117851622930075.1638176-UTR-H-elongata_contig188:11722..11785Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig188 11723..11785 -
1691679271.1798158-UTR-H-elongata_contig188:11722..117851691679271.1798158-UTR-H-elongata_contig188:11722..11785Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig188 11723..11785 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930074.996643-CDS-H-elongata_contig188:4633..47201622930074.996643-CDS-H-elongata_contig188:4633..4720Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 4634..4720 -
1691679271.0727854-CDS-H-elongata_contig188:4633..47201691679271.0727854-CDS-H-elongata_contig188:4633..4720Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 4634..4720 -
1622930075.0122352-CDS-H-elongata_contig188:5343..54881622930075.0122352-CDS-H-elongata_contig188:5343..5488Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 5344..5488 -
1691679271.0813801-CDS-H-elongata_contig188:5343..54881691679271.0813801-CDS-H-elongata_contig188:5343..5488Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 5344..5488 -
1622930075.0270677-CDS-H-elongata_contig188:5970..60551622930075.0270677-CDS-H-elongata_contig188:5970..6055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 5971..6055 -
1691679271.0986612-CDS-H-elongata_contig188:5970..60551691679271.0986612-CDS-H-elongata_contig188:5970..6055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 5971..6055 -
1622930075.0420313-CDS-H-elongata_contig188:6254..62911622930075.0420313-CDS-H-elongata_contig188:6254..6291Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 6255..6291 -
1691679271.109994-CDS-H-elongata_contig188:6254..62911691679271.109994-CDS-H-elongata_contig188:6254..6291Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 6255..6291 -
1622930075.053114-CDS-H-elongata_contig188:6698..69511622930075.053114-CDS-H-elongata_contig188:6698..6951Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 6699..6951 -
1691679271.1207023-CDS-H-elongata_contig188:6698..69511691679271.1207023-CDS-H-elongata_contig188:6698..6951Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 6699..6951 -
1622930075.0654728-CDS-H-elongata_contig188:7565..77501622930075.0654728-CDS-H-elongata_contig188:7565..7750Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 7566..7750 -
1691679271.1330178-CDS-H-elongata_contig188:7565..77501691679271.1330178-CDS-H-elongata_contig188:7565..7750Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 7566..7750 -
1622930075.0813894-CDS-H-elongata_contig188:8023..81401622930075.0813894-CDS-H-elongata_contig188:8023..8140Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 8024..8140 -
1691679271.1410937-CDS-H-elongata_contig188:8023..81401691679271.1410937-CDS-H-elongata_contig188:8023..8140Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 8024..8140 -
1622930075.104535-CDS-H-elongata_contig188:8938..90371622930075.104535-CDS-H-elongata_contig188:8938..9037Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 8939..9037 -
1691679271.1493995-CDS-H-elongata_contig188:8938..90371691679271.1493995-CDS-H-elongata_contig188:8938..9037Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 8939..9037 -
1622930075.1258137-CDS-H-elongata_contig188:9586..97371622930075.1258137-CDS-H-elongata_contig188:9586..9737Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 9587..9737 -
1691679271.1579094-CDS-H-elongata_contig188:9586..97371691679271.1579094-CDS-H-elongata_contig188:9586..9737Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 9587..9737 -
1622930075.1447573-CDS-H-elongata_contig188:11642..117221622930075.1447573-CDS-H-elongata_contig188:11642..11722Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 11643..11722 -
1691679271.1693454-CDS-H-elongata_contig188:11642..117221691679271.1693454-CDS-H-elongata_contig188:11642..11722Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig188 11643..11722 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig188.5137.1

>prot_H-elongata_contig188.5137.1 ID=prot_H-elongata_contig188.5137.1|Name=mRNA_H-elongata_contig188.5137.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=413bp
MDLMIVVQFRPAWEIQAYLRFARLAYRVENSLYMGSEATGLYPALVDGQY
VLPADHATGHIARKRKDLDRNLTEEEKAETRAFSLTVREGLQPLLRVLRY
RANEGEVQQTVHPPMKRTLPWPLSAWSPGAEDRRSRGESDLRGFSGLDKD
DLIGRACKLYADLDLRLGRKDAYFFGATPTSLDACVFGHLAEAWTIPVLL
DLLPAFDNLSRFFRRVCDNFFRPDSFPNASGVGDPAGDADVIAQGGVTES
KGSESDEPEGVVGEDIGGMGGSGVLRETRMRADYVNSLNAFNQLELEDES
GATHVWTGVCSLRRGTIHPRSVPQEAPCECRYIRSSLGWIFTLTDTPCGG
GSGYRWQPGRRTTARRRDAADVHGHRRGALLPSHDAKRLGMIEVRSCFWR
LRVHSDQGLADG*
back to top

mRNA from alignment at H-elongata_contig188:3609..11785-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig188.5137.1 ID=mRNA_H-elongata_contig188.5137.1|Name=mRNA_H-elongata_contig188.5137.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8177bp|location=Sequence derived from alignment at H-elongata_contig188:3609..11785- (Himanthalia elongata Himel1 dioecious)
CGGTACTGGTGCCTGCTTCGAATCGGACCGGATCAGCAGCCCGTGATCGC
TCGAGGTAGCGAAATGGATCTGATGATCGTGGTGCAGTTCCGCCCGGCGT
GGGAGATCCAGGCCTACCTTCGATTCGCACGCTTAGCTTACCGGTAAGCC
GTAAAAGAGCTCCAGCTCCTGTTGCACGAGACATAGAGAAAATAACCTAC
ATGATCGAGAAATATCATTAAAAACAAAAGAAGGTCATGTCAGGACGTCT
GCCTTTTTTTTGCATGGATTACTGGATTTCAGACGTTGACGGCACAGCGT
CAACCAGAGACCAAAACCTCGAGCCCACAATCTACATTAGTCACTTGTCG
TGCAGGCTACCTCTATATAGGCGACCTGCGGTGAGGCACTAGACGATTTG
AGTCAGGATAAGAGCTATGGCCAGCGCCATCAAAGTTTGAGCCAAAGCTT
GAAAGACTACGGTAGTATCAGTATCACAGCAGCTGGAGCATGAAAAAATA
GACAAAACCAACCGACGAGAACATAAGTGCACAAAGTTGCAGCATAGGTG
GAAAATGAAGGTTCCGCCGTATCGTCTGACAGAATACGAACATTCGATTT
TGGTCGCGAAAATATTAGATCCCAGAACCCCGCACCCGCCATGCCATCTT
TCAGCTTTGGACCTAGGCATTGACGCAAGGCATGGCTGGTGATGTACTAT
CTTCGGATGTAGCCACGCAGCCGAATATGGACATCTGGTAGAGGGTAGGG
TTAGCGGCTCTTTTTATATTTTAGGCGCCTTTTTGTCAGCCCCTTTGCGT
ATTCAGGTAGAGACAACTGCCCGGCTGGATAGTCGGATGCGTATAGAGAG
CTTCTCCGTTAAGGCGTAAGGCCACAGCTCCAGCTTGGCAGTGGTAGTCT
TGTGTGTAATGTTTGGGATCCTGGAAGAGTAAGGTGTCCTGTCCCCGGGT
CCCAAAACATAATAAAGCCTCCCACAATTTTGACTGAAAACGTTTTTTTT
CCACATGTTGCAGCAGCAGTGATCGGTGCTCTCGAGATAAAGTGTACTAT
AGTCACTGAGCGCGGAGCTCTACTCCAGGATATAAACGGAGGTTCACTCA
GAACTGTTCTACATATTCGTACCTAACAGCCGTCCAAGTCGGGGAGTTTT
CCCCAACAACTACGATTAGCTGTTACCAAGCGTACCCGATATTGTGTATG
TATGTATGGTCGCACTTTTAGCAGAAGGATCAACCGGATTTGGTTTCCTT
CTGCTCGTGGTCAGCTGAACGAGGAAAATATTTTTCCCTGTCCTCGTCGC
GCCTGAGATTTTGGTCTCGCGAGACGGGTTCAGCCGTCCCGTCCCGCGTC
AGCCAGCTCATTCTCTCAACCCAGGCTGAATATGGTGCTTACTCCCGGGA
TCCTCTCAATCCTCCCGTTTTCCGCGACGGGGTCAATCCCGATTTCATCA
GGTCACGCAATTGCGTATCGATGACGTTTACTACCGAGAGTCCGCCGGCA
CTAAGCCAATAGTCCTCAAGGTAGCTTGAGTAACGGGTGCAGCCTGTTCA
GGTAACCCCATGGACCAAGTAATGTACGCCTCTATTTTCCCAGTAGGTAA
TATGTTGATAGAATGGCAGACCAAAGCGGGTGTACTCTGATGCAGTTCGC
ACTGCATGAGGGCATTCGAGGCCCTGCTGCTTCTCCTTCCTGACGAGGAG
CGAAGGGAGTCGAGTCTCTTCTCCCGTGTACCTGCGTGTGAACCAGACCG
CCTTGACTCCCGACCAATACTCTGAAGGTGTTCGACTGTAATCAACCCAA
AACAAAAGAGGAACGAAGGCGACATGATATAGCACCCCCTTGGAGACACC
CTTCCCTCCCCTCCCCCCCCCTCACCAGGGCTCCCCTTACTTTCTCGAAC
AAGCTACGTAGAGGGGCACGGGGAGGATGCGAGACACCGGACCCCTGTCA
TCTGCGTCAGAACAGTGCCTTGAGTAATAGTAGCGTGCGAGAACGAAGAT
ATGAATCTTTATGTTAACGAACCGAGCTGGACGTCCTTCCTCGCGCAGGG
TAGAGAACAGTCTCTACATGGGATCCGAGGCCACGGGGCTGTACCCCGCT
CTGGTTGACGGGCAGTATGTGCTGCCAGCGGATCACGCAACGGGACACAT
CGCCCGGAAGCGCAAGGATCTCGACCGCAACCTGACGGAAGAAGAGAAGG
TGCGTCCTCTCGGACAGGAAATCGACATGGAGTTCCGAGGAAGCCGATGG
AGGCGTTGAGCCTTCGTCGCGCCGCCATGACAGGAAAGCGAGAGAGAGTA
GCAAGTGGTCGGAGGACCGGCAACAACCCGGATAGGCGGCATGGCTTGTT
GCTGTACGCGTACGTAGGAGGTACGCGTCGATCTGCTGCATACGATTAAT
ACGTACGCTGAGTTGGGTCGGCGTCAGTGTTGTGTTGTGGTTTTAGTTAT
GAGCACTTCCATGTAGAGAAGGGGTGATTAGGTAGCCCACAACCGCCGCT
ATTTGTGTTTGGATGTAAACTACGCGGCTGGATCGTTCGTTACTAACGTA
TTGAATTAAGTATATAGGGTTGTAAGGCTCTAAATATCGGTCGGTCTGAC
GCCTGGTGAGAGCCTGGTCGCCTGTTTCCTCCCCCGCGGCTATATGTTCC
CTTTCCCAATGTAATAATATTTTGCGCGACTGAATCGTGCTGATGGCATG
GGCGGGCCTGACCTGGCTTCTTGTGGTTCTTGTTGCCATGCTGAGCAGGC
GGAGACACGCGCCTTTTCCCTGACGGTCCGTGAAGGTCTGCAGCCCCTGC
TCCGAGTGCTCCGCTACAGGGCTAACGAGGGGGAGGTCCAGCAGACGGTG
AACGAGGCAGCGCGCGACGATCGGGCGAGCGGTAGCGATATTTTTCTGTC
ACCACCAAGATGCAGCAGTGCGTAGGTTGGACCAGCACGTTGATCGCAGC
GGGACCGTGTGAATGGATGCGTAAGAGGTGCCCCCCGTCCCCCAGCACTC
CCGCACTGCAATCAAAATACCGTCAAAGAGCCGATAGTGCATCCGCGAAA
CGTTTGGGCTTGGCGCGGAATTGTATTGCCTATGAAGTCGGCGAGACCAC
CTCGCTGTGACGCGTGTGGGGTGACTACAAGAACCCCCTACCCCCGTCCC
TCAGCACCCCCGCACTGCAATCAGAATGGCGTTGAAGAGCCGATAATGCA
TTCGCGAAACGTTTGGGCTTGGCGCGGAATTATATTGCCCATGGAGTCGG
CGAGACAACCTCGCTGTGACGCGGTTGGGGTGACTGCAAGAACATAATGC
GCGTTAGAGAGCTCAGGTTGGGAGGCGAGCGTGCCCTTGAGATCTGGAGT
GTCAGCTTATTTTCCCGTTTGCCCCGGCGTTCTGAAGGTAGCCCCGCCTA
GCAAAGAACTCCCCCTCCCCCCTTCTCTACCCTTGCAGCGTACCACACCT
TGTGTCAAGTCTTCTTCACTCCCTCTTACACAATGGATGACCTTTCATCA
TTGAGGGCCGACGAGCTTTGCGAGGCACGGTCGCCTACTCTGCATTATAC
CTCGATACCGTGCCTGTACTCACTGAACCCCGAGTCAATCGCCCTCTCCC
TTTCCGCCCCCCTTTCTTCACGCCTATCTATCTTGACTGTTGCAGGTGCA
CCCACCGATGAAGCGGACGCTACCCTGGCCGCTATCCGCGTGGTCACCCG
GCGCCGAAGACCGAAGGAGCAGGGGGGAGTCCGACTTGAGAGGATTCAGC
GGGCTGGACAAGGTTTGCGTTTTGATGTGTCACGCACGCGCAATGGCGCT
GCTATTTCATCTGTGCACTGTACACAAGAGTTCTATCGTAACGCGTGGCC
GGTAGCTCGTCCTGCGTTGAGGATGATTCCGTTGGCTGAGCGTTTGCCAA
CTCCCACGCCCCGTCGCGTGTCCCCCCACTGCGCTGACATACCTCCTTCG
GCACACGCCCTCTCCGCTTCTGTTGAACGAGTGATGCCTTGTTCCGTTTC
GTCTTTGAGACCTGTACCACCCCCCACCCCCCAAGGATGACTTGATTGGA
CGAGCGTGCAAGCTATACGCGGACCTCGACCTGCGACTTGGTCGTAAGGA
CGCGTACTTCTTCGGGGCGACGCCGACCTCGCTGGACGCGTGCGTGTTCG
GACATTTAGCAGAGGCGTGGACGATCCCCGTTCTACTTGATCTCCTCCCC
GCGTTCGATAACCTGTCTCGGTGAGAGCAAGGAGACCCCGTCTGATCCCC
CTTCAAGTTGGGACTGTAGCTCTAGGCAAACGGCGATCACAGGTAATGAT
TACTTTCTAGATATTTAGCAGGGTGGTGCCTGGTGCGTTCGACCGCAAGG
CTGGTATATATCTTTAGGGATGCGTGCCCCCCCGCCCCGCCCCTATCTCC
TCCCTTCTCCCCCGCATGAGCTGGACGGTTTTTGAACGGGGGTGATATCG
CGAGAGAGCGACGCGCATGATGTTATCAACTTTTTTTTGCAGAGGAGGAA
GGAAGGCACAACGCACTATAGTAATGCCGCCTCAGATACACACGAAAAAA
CACATATTACGAGTGTCACTATTCCTATGCATTGATTCCAATACACACAC
ACACACACACATATTCACGCTCTCGATGAAGTCAGTACTTTTTCGGCGAA
TCTTAAGCGCTCCTGGTAAGTGTCAATTCAGTATACAGCCGACCGGGCGT
GCGATGCGCGTTCTCTCCCCCTGTCTTTTTATGCTTGCCTTAGACTCACA
AGCGAGACGGGCAGCGTTGCCTTGGGTGAGGTCGGTGAGCTAAGGGAATG
AACGGCTTTGTTCCCTTATCTCCACGGTCGGCAGGTTTTTCCGCCGCGTC
TGCGACAACTTTTTCCGCCCGGACTCTTTCCCTAACGCTTCGGGCGTTGG
AGATCCAGCCGGGGACGCGGATGTCATAGCGCAAGGAGGCGTTACGGAGA
GCAAGGGATCAGAGAGTGACGAGCCGGAGGGTGTCGTGGGAGAGGATATA
GGGGGCATGGGCGGTAGCGGCGTTCTCCGAGAGACGAGAATGCGCGCGGA
CTACGTCAACTCGCTAAATGCCTTCAACCAGTTGGAGGTGGGTGGGTTTC
CCGATCCCGAAAGAGACGCGTGGGGGTTAGGGAGGGGGTGAATATGCTGG
CATAGAGAGACACAACAAGTCATGTTCACCGTACGTGATCTCTCTCCAAA
CGTGTGAGCTCGTTGCGACTGACGTTTTTCCACAGAAGGAATGCCAACGG
CTAGGTCGATAGTCTAAGAGACCGATGACCCTGTTCCTCATCTCCGAAGC
GAACAACCCCGAGTCGCTAGAGCTAGGCTGGTCAAAGTTTTGGTGCCGCG
GGAGTAAAAGTTGGGTCGCCTTTTAGTTCATTTGGGGCCAGTTCTACGCT
GCTTACTGAGAGTATCGCGCATTTGCAGCATTTGTTGGTTTGGGTAAAGA
GTTCGAGCGTTCACTACCGTCCCCGTGGCACGATCCCCCCACAGCTCGAG
GACGAAAGTGGAGCGACGCATGTTTGGACAGGCGAGATCATCGTCATAGC
AACCCTTTTTTTCAAGGATGCGCGCGACCTTGAGGTCAGACAAATTATTT
TTATTTTTTAAAACCCTTGAATTAATTCCAACCCTCCGAACATATGTTTG
ACGTCACGCTAATGTTATGTCCCACAAGCGCCAAGTATGAGTAATATATT
ATGTACATGCGCGTGTGTTGCCTTCGTCAGGGGTGTGCTCTCTGCGCCGA
GGTACCATACATCCCAGATCCGTTCCCCAAGAAGCCCCTTGCGAATGCCG
GTATATCAGATCCAGGTGTGATGCCTTCGCAACAGGGCGCCTGGGAGGAG
AGGGGGGACGTTCTAAAGTTTCGCACGCCTTGTAGCTATTAAGACCATTG
GCCACGCATCCTCGGGAGGACGAAGTCGTGTGATGGGACGGGGGGACGGG
GGACGGACGACTTTAGCCTCTTTATTTTAGTGAAATCACGAAGAGGTTGA
ATTTGCCTCTGTATCAGTCAGTTTTATCGTACGTTCAGTGTTACGTAGTA
TATTCGAACGTGCGTGGTGTGTGTGTGTGTGTATTTATTAAATTGCACAT
AACCGCGATATCCGGCGTCATTCTAGGCTTGTGTATGTGGCATCGCCGTC
GATGATGGACTCGAGGGGAACAAAGAACATATCTTTATGTGGCAGATCAC
GACCGCTCGACTGAGCTCGAACTCTTGTACATTCTCTCGATCTTGATGGT
TTCCCGTGACAACGTCCCGAACCCCGATCAATTGGTTCGGGTCCAAGTCT
TGGCTGGATATTCACCCTCACCGACACACCCTGCGGGGGCGGCAGCGGCT
ACAGGTGGCAACCCGGAAGGCGAACAACTGCCCGAAGACGCGATGCCGCT
GATGTACACGGCCATCGGCGCGGCGCTCTTCTTCCTTCTCACGTGAGTCT
CGACGTTGCCGAAAAGGAAACAGGGGTTTCGTACAGAGAAAATTCCCGCC
CTCTGCTGGACTGCCCCGCAAACGACGGTCGCGGCGTGGGAGTACTTGAC
TTTTTTTTTCGCCCTCTTATCATCAAAATAAAATCTTGATGAATTTTGTT
CTGTCGATTTGGGTGTGACTTATATTTATTTGAAGAGGACGATGGTGTCT
TCGCTTGTCTTGTGGATAGAACAGGGCCCAGAGCATTCGCCACGGCTTTT
CGTCCCAGATTTCGAGGAGTGCCGCTATCAGCGTGGATGGCTGTTAGAGG
CACTGGGGGCGCTAGAGAAGCGATGTTTGTTTCCCCCCCCCCCCGATGAA
TCTCGTCAATTATTTCCCACTTCAACTCCGCCGCACTATATGATTGAAAA
CCAAAAACCGTATTCGCGTCCGAGGAACGACCTCTCCATTCTTACTCTGT
GGAAAACTGTACCTACCGTTGGTGCCTTGTTCGTGGTGAAGGATTTATAT
ATTACTAGCCTTGCTTCTATGAGCCACCTCGATCTGTCCTAATGTTGCCG
TGAGATCTCAGTGCCTCACCCCACATCCCCTGTTTTTGCTACACGCTCTT
TTTCCCTATTTGCAGGACGCTAAACGCCTCGGAATGATTGAGGTCCGTAG
CTGTTTCTGGCGATTACGGGTACACTCTGATCAAGGACTGGCTGACGGAT
AAAATCGTACACGCCACAACGGTCATGTGTCAAAGCGCGTGCCGTCCGCC
CATGACCAGCCTGATGACCATATCTAGCCTGAAGGGTTGCCTGTCGGTCC
TCTTCATGCGGATACGCAATGATTGGCTGCAAGGAGGAGCACTGACGTGA
CGTACCGTTTGGTTTTGCTTCTGCATGCGCCAGAATGAGTAGGTCGGGGA
GTGGGGACGCCAATACACGGGAAAGGCAGGAGAGAGATCCCCATCACTCG
TCCCTTTAACATTGGCAGTCGAAAGGGTGTATGTCTGCTCTGTCATCTCT
CGGACGGCAGTAGCGTTTTCTGCTTGCCTGTTGATATTCACCCCCTGTAC
AATACCGCATATATTCATCACCGTCACCGTCCCCTTCCCCTTCCCACACC
GAGTACCTATCCGCGTTTTTGCTGGGCTGTGGGTTGGATTATTGAATAGC
AGAGGCACCGCCACGCCTTCACGTCGTATGTGCTACTTTGGCAACAACCG
ACAGCCTCCCGCCTCCCCGGGGCACATGGTGCACAGTAACGGGGGGGAGG
GTTTCTCGTTGAAGAAGGCGTGCACGAGCCGTGCCGTGTCCCCGGCGATG
GGACAGTCCGCCAAGAGCGCCGACAGCGGCTGCAAACACACGCCCCTAGA
CATGTTTTAAAGACAGTATGGCAGAAGCAGAAGCAGAAGCAACGATTTTG
AAGTGGGTATGAGAACAGTAAGCCAAGGAGCTACACCCATTATTATGCCT
CAGACGTGAAACGATAAACACGGCCGCCTGCGCCCGTAGAATCTTTCATC
GCAGGATCGCACCGCGGCGTGATGTACGCGCAGCGTACGTACATGATTTG
CGCTGGTGTAACGATAATTATTACCGAGCTGGGCGTGGGCATGATGGTGC
TCGACGACCGCCATCGATAAAAAAACTCGCGGCTCGCTGTCATCATCGGC
GCTGTTGGGATGTTAACCTCCCAACCCTCCTGAACACATAAATGCATACT
CATATAGAGGCTTTCTCTTTGTGATGC
back to top

Coding sequence (CDS) from alignment at H-elongata_contig188:3609..11785-

>mRNA_H-elongata_contig188.5137.1 ID=mRNA_H-elongata_contig188.5137.1|Name=mRNA_H-elongata_contig188.5137.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2478bp|location=Sequence derived from alignment at H-elongata_contig188:3609..11785- (Himanthalia elongata Himel1 dioecious)
ATGGATCTGATGATCGTGGTGCAGTTCCGCCCGGCGTGGGAGATCCAGGC
CTACCTTCGATTCGCACGCTTAGCTTACCGATGGATCTGATGATCGTGGT
GCAGTTCCGCCCGGCGTGGGAGATCCAGGCCTACCTTCGATTCGCACGCT
TAGCTTACCGGGTAGAGAACAGTCTCTACATGGGATCCGAGGCCACGGGG
CTGTACCCCGCTCTGGTTGACGGGCAGTATGTGCTGCCAGCGGATCACGC
AACGGGACACATCGCCCGGAAGCGCAAGGATCTCGACCGCAACCTGACGG
AAGAAGAGAAGGGTAGAGAACAGTCTCTACATGGGATCCGAGGCCACGGG
GCTGTACCCCGCTCTGGTTGACGGGCAGTATGTGCTGCCAGCGGATCACG
CAACGGGACACATCGCCCGGAAGCGCAAGGATCTCGACCGCAACCTGACG
GAAGAAGAGAAGGCGGAGACACGCGCCTTTTCCCTGACGGTCCGTGAAGG
TCTGCAGCCCCTGCTCCGAGTGCTCCGCTACAGGGCTAACGAGGGGGAGG
TCCAGCAGACGGCGGAGACACGCGCCTTTTCCCTGACGGTCCGTGAAGGT
CTGCAGCCCCTGCTCCGAGTGCTCCGCTACAGGGCTAACGAGGGGGAGGT
CCAGCAGACGGTGCACCCACCGATGAAGCGGACGCTACCCTGGCCGCTAT
CCGCGTGGTCACCCGGCGCCGAAGACCGAAGGAGCAGGGGGGAGTCCGAC
TTGAGAGGATTCAGCGGGCTGGACAAGGTGCACCCACCGATGAAGCGGAC
GCTACCCTGGCCGCTATCCGCGTGGTCACCCGGCGCCGAAGACCGAAGGA
GCAGGGGGGAGTCCGACTTGAGAGGATTCAGCGGGCTGGACAAGGATGAC
TTGATTGGACGAGCGTGCAAGCTATACGCGGACCTCGACCTGCGACTTGG
TCGTAAGGACGCGTACTTCTTCGGGGCGACGCCGACCTCGCTGGACGCGT
GCGTGTTCGGACATTTAGCAGAGGCGTGGACGATCCCCGTTCTACTTGAT
CTCCTCCCCGCGTTCGATAACCTGTCTCGGATGACTTGATTGGACGAGCG
TGCAAGCTATACGCGGACCTCGACCTGCGACTTGGTCGTAAGGACGCGTA
CTTCTTCGGGGCGACGCCGACCTCGCTGGACGCGTGCGTGTTCGGACATT
TAGCAGAGGCGTGGACGATCCCCGTTCTACTTGATCTCCTCCCCGCGTTC
GATAACCTGTCTCGGTTTTTCCGCCGCGTCTGCGACAACTTTTTCCGCCC
GGACTCTTTCCCTAACGCTTCGGGCGTTGGAGATCCAGCCGGGGACGCGG
ATGTCATAGCGCAAGGAGGCGTTACGGAGAGCAAGGGATCAGAGAGTGAC
GAGCCGGAGGGTGTCGTGGGAGAGGATATAGGGGGCATGGGCGGTAGCGG
CGTTCTCCGAGAGACGAGAATGCGCGCGGACTACGTCAACTCGCTAAATG
CCTTCAACCAGTTGGAGGTTTTTCCGCCGCGTCTGCGACAACTTTTTCCG
CCCGGACTCTTTCCCTAACGCTTCGGGCGTTGGAGATCCAGCCGGGGACG
CGGATGTCATAGCGCAAGGAGGCGTTACGGAGAGCAAGGGATCAGAGAGT
GACGAGCCGGAGGGTGTCGTGGGAGAGGATATAGGGGGCATGGGCGGTAG
CGGCGTTCTCCGAGAGACGAGAATGCGCGCGGACTACGTCAACTCGCTAA
ATGCCTTCAACCAGTTGGAGCTCGAGGACGAAAGTGGAGCGACGCATGTT
TGGACAGCTCGAGGACGAAAGTGGAGCGACGCATGTTTGGACAGGGGTGT
GCTCTCTGCGCCGAGGTACCATACATCCCAGATCCGTTCCCCAAGAAGCC
CCTTGCGAATGCCGGTATATCAGATCCAGGGGTGTGCTCTCTGCGCCGAG
GTACCATACATCCCAGATCCGTTCCCCAAGAAGCCCCTTGCGAATGCCGG
TATATCAGATCCAGTCTTGGCTGGATATTCACCCTCACCGACACACCCTG
CGGGGGCGGCAGCGGCTACAGGTGGCAACCCGGAAGGCGAACAACTGCCC
GAAGACGCGATGCCGCTGATGTACACGGCCATCGGCGCGGCGCTCTTCTT
CCTTCTCACTCTTGGCTGGATATTCACCCTCACCGACACACCCTGCGGGG
GCGGCAGCGGCTACAGGTGGCAACCCGGAAGGCGAACAACTGCCCGAAGA
CGCGATGCCGCTGATGTACACGGCCATCGGCGCGGCGCTCTTCTTCCTTC
TCACGACGCTAAACGCCTCGGAATGATTGAGGTCCGTAGCTGTTTCTGGC
GATTACGGGTACACTCTGATCAAGGACTGGCTGACGGATAAGACGCTAAA
CGCCTCGGAATGATTGAGGTCCGTAGCTGTTTCTGGCGATTACGGGTACA
CTCTGATCAAGGACTGGCTGACGGATAA
back to top