prot_H-elongata_contig187816.5131.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig187816.5131.1
Unique Nameprot_H-elongata_contig187816.5131.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
BLAST of mRNA_H-elongata_contig187816.5131.1 vs. uniprot
Match: D7FP08_ECTSI (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP08_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.250e-28
Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 0
Query:   12 IRVEECERMQLVVCCRRLTVTNSLECIFPVFVATSPVLSGDNRACQFAPYNSCYPRN 68
            +RVEECERMQLV CCRRLTVTNSLECIFPVFVAT PVL GDNRACQFAPYNSCYPR+
Sbjct:  159 VRVEECERMQLVTCCRRLTVTNSLECIFPVFVATPPVLCGDNRACQFAPYNSCYPRH 215          
BLAST of mRNA_H-elongata_contig187816.5131.1 vs. uniprot
Match: A0A7S3XVC9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVC9_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 2.030e-12
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0
Query:   12 IRVEECERMQLVVCCRRLTVTNSLECIFPVFVATSPVLSGDNRACQFAPYNSC-YP 66
            + V ECER+QLV CCRRL + N L+ +FP   AT PVL GD+RAC+ AP N   YP
Sbjct:  180 VNVVECERIQLVTCCRRLVINNCLDSVFPTLAATPPVLHGDHRACRLAPPNHAGYP 235          
BLAST of mRNA_H-elongata_contig187816.5131.1 vs. uniprot
Match: A0A446YQ64_TRITD (TBCC domain-containing protein 1 n=2 Tax=Triticinae TaxID=1648030 RepID=A0A446YQ64_TRITD)

HSP 1 Score: 62.0 bits (149), Expect = 1.340e-9
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0
Query:   12 IRVEECERMQLVVCCRRLTVTNSLECIFPVFVATSPVLSGDNRACQFAPYNSCYPR 67
            ++VE CER+Q+VV  +R+ + N  ECIF + V   P++ GDN   Q AP+N+CYP+
Sbjct:  396 VKVEHCERVQIVVASKRICIANCRECIFYLGVNHQPLIVGDNHKLQVAPFNTCYPQ 451          
BLAST of mRNA_H-elongata_contig187816.5131.1 vs. uniprot
Match: A0A3B6SKG2_WHEAT (TBCC domain-containing protein 1 n=27 Tax=Pooideae TaxID=147368 RepID=A0A3B6SKG2_WHEAT)

HSP 1 Score: 62.0 bits (149), Expect = 1.340e-9
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0
Query:   12 IRVEECERMQLVVCCRRLTVTNSLECIFPVFVATSPVLSGDNRACQFAPYNSCYPR 67
            ++VE CER+Q+VV  +R+ + N  ECIF + V   P++ GDN   Q AP+N+CYP+
Sbjct:  396 VKVEHCERVQIVVASKRICIANCRECIFYLGVNHQPLIVGDNHKLQVAPFNTCYPQ 451          
BLAST of mRNA_H-elongata_contig187816.5131.1 vs. uniprot
Match: A0A1E7F318_9STRA (TBCC-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F318_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 4.720e-9
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   12 IRVEECERMQLVVCCRRLTVTNSLECIFPVFVATSPVLSGDNRACQFAPYNSCY 65
            + V +CER ++    RR+ ++NS + +  VF  T P+L GDNR+CQFAPYN+ Y
Sbjct:  505 LHVVDCERTKITTAARRILISNSCDSVMNVFTPTPPLLVGDNRSCQFAPYNTYY 558          
BLAST of mRNA_H-elongata_contig187816.5131.1 vs. uniprot
Match: A0A7S3BWF8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BWF8_9VIRI)

HSP 1 Score: 60.1 bits (144), Expect = 6.270e-9
Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 0
Query:   13 RVEECERMQLVVCCRRLTVTNSLECIFPVFVATSPVLSGDNRACQFAPYNSCYP 66
            R+E CER QL+VCCRRL V+N  +C   +   T PV  GDNR    AP+N+ YP
Sbjct:  206 RLERCERTQLLVCCRRLVVSNCHDCTLYLATNTPPVFVGDNRNVVVAPFNTYYP 259          
BLAST of mRNA_H-elongata_contig187816.5131.1 vs. uniprot
Match: A0A2P6VFL1_9CHLO (TBCC domain-containing protein 1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFL1_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 8.820e-9
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query:   10 RQIRVEECERMQLVVCCRRLTVTNSLECIFPVFVATSPVLSGDNRACQFAPYNSCYPR 67
            R +RVE CER+Q++  CR +T+    +CIF +     P+L GDNR  Q APYNS Y R
Sbjct:  422 RTLRVERCERVQVICACRSVTINTCHDCIFYLGTNQPPLLLGDNRFLQLAPYNSGYER 479          
BLAST of mRNA_H-elongata_contig187816.5131.1 vs. uniprot
Match: A0A448ZKV8_9STRA (TBCC domain-containing protein 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKV8_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 8.820e-9
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   12 IRVEECERMQLVVCCRRLTVTNSLECIFPVFVATSPVLSGDNRACQFAPYNSCY 65
            + V +CER ++    RR+ ++NS + I  VF  T P+L GDNR+CQFAPYN+ Y
Sbjct:  521 VHVVDCERTKVTTASRRILLSNSCDTIMNVFTPTPPLLVGDNRSCQFAPYNTYY 574          
BLAST of mRNA_H-elongata_contig187816.5131.1 vs. uniprot
Match: UPI001CC6D283 (TBCC domain-containing protein 1-like n=4 Tax=Proteaceae TaxID=4328 RepID=UPI001CC6D283)

HSP 1 Score: 58.9 bits (141), Expect = 1.630e-8
Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   12 IRVEECERMQLVVCCRRLTVTNSLECIFPVFVATSPVLSGDNRACQFAPYNSCYPR 67
            +RVE CER+Q++V  +R+ + N  EC+F + V   P++ GDN   Q APYN+ YP+
Sbjct:  374 VRVEHCERVQVIVAAKRIYIANCRECVFFLGVNQRPLILGDNHKLQVAPYNTFYPQ 429          
BLAST of mRNA_H-elongata_contig187816.5131.1 vs. uniprot
Match: UPI0009E2D65D (TBCC domain-containing protein 1 isoform X1 n=3 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E2D65D)

HSP 1 Score: 58.9 bits (141), Expect = 1.630e-8
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   12 IRVEECERMQLVVCCRRLTVTNSLECIFPVFVATSPVLSGDNRACQFAPYNSCYPR 67
            +RVE CER+Q++   +R+ + N  EC+F + +  SP++ GDN   Q APYN+ YP+
Sbjct:  389 LRVEHCERVQIIAAAKRICIVNCRECVFYLGINHSPLVLGDNHKLQVAPYNTFYPQ 444          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig187816.5131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP08_ECTSI1.250e-2891.23C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A7S3XVC9_HETAK2.030e-1257.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A446YQ64_TRITD1.340e-946.43TBCC domain-containing protein 1 n=2 Tax=Triticina... [more]
A0A3B6SKG2_WHEAT1.340e-946.43TBCC domain-containing protein 1 n=27 Tax=Pooideae... [more]
A0A1E7F318_9STRA4.720e-946.30TBCC-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A7S3BWF8_9VIRI6.270e-951.85Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A2P6VFL1_9CHLO8.820e-948.28TBCC domain-containing protein 1 n=1 Tax=Micractin... [more]
A0A448ZKV8_9STRA8.820e-948.15TBCC domain-containing protein 1 n=1 Tax=Pseudo-ni... [more]
UPI001CC6D2831.630e-844.64TBCC domain-containing protein 1-like n=4 Tax=Prot... [more]
UPI0009E2D65D1.630e-842.86TBCC domain-containing protein 1 isoform X1 n=3 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012945Tubulin binding cofactor C-like domainPFAMPF07986TBCCcoord: 7..66
e-value: 6.0E-11
score: 42.1
IPR016098Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminalGENE3D2.160.20.70coord: 3..68
e-value: 1.7E-8
score: 35.8
IPR039589TBCC domain-containing protein 1PANTHERPTHR16052UNCHARACTERIZEDcoord: 7..67
IPR017901C-CAP/cofactor C-like domainPROSITEPS51329C_CAP_COFACTOR_Ccoord: 1..68
score: 13.577

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig187816contigH-elongata_contig187816:69..272 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig187816.5131.1mRNA_H-elongata_contig187816.5131.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig187816 69..272 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig187816.5131.1 ID=prot_H-elongata_contig187816.5131.1|Name=mRNA_H-elongata_contig187816.5131.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
MSLPSLPARRQIRVEECERMQLVVCCRRLTVTNSLECIFPVFVATSPVLS
GDNRACQFAPYNSCYPRN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012945Tubulin-bd_cofactor_C_dom
IPR016098CAP/MinC_C
IPR039589TBCC1
IPR017901C-CAP_CF_C-like