mRNA_H-elongata_contig18773.5127.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18773.5127.1
Unique NamemRNA_H-elongata_contig18773.5127.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig18773.5127.1 vs. uniprot
Match: A0A6H5KBU9_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU9_9PHAE)

HSP 1 Score: 345 bits (886), Expect = 3.350e-105
Identity = 231/416 (55.53%), Postives = 274/416 (65.87%), Query Frame = 1
Query:    1 TKRRMLGNIQFIGELYKKKVLKENVMKTCVEHLLNANRDLDSSNHLKSLKFKSGEIDEDNLEALGKLMATIGFTLDTERNTLYMKEIFRLLDRHANNKSINSRLRFMIRDLDELRRHSWVPRRKQDKAKTLDDIRKEAEADAARGGP-GRAGPPRGN--SDFRGA---PQDARQSRRDXXXXXXXXXG--------GSGNGPPDRWNNPHPHPTRRRGQW*KLDQQRPGMRESGYPGGVAGDGRREDRRMGGVAPRGAYPSQQQQEQAPAPKETLEASDRLRNKINGFVNEFVAIKDEKEALQSFDELPNGEGPIAETVTSIVVEKVIDGNRAERAARLDLLRMLAREKRLPEAALKSALSPILEIIEDIAIDAPGAEKYLGECLSVLISEKALQFPFVVGHEALGRCPKAVPKIF 1206
            TKRRMLGNIQFIGELYKK +LKENVMKTCVEHLLNA +++ +   LK+LKFK+G++DEDNLEALGKL+ TIG TLDT +NTLYM EIFRL+D+ ANNKSINSR+RFMIRDL+ELR+H+WVPRRKQDKAKTLDDIRKEAEA+A  GGP GR G       SDFRG    PQD R +RR XXXXXXXXX         GS                                                           A PS      A +P +  E S++L NKINGFVNEFV+ KD+ EAL SFDELP G  PI ETV+ I++EKV++G  AER ARLDLLR+LA +++LP+ AL+  L P++E I DIA+D+P A+K LG CL+VLISEKAL FPFV        CP A+ KIF
Sbjct:  576 TKRRMLGNIQFIGELYKKSMLKENVMKTCVEHLLNAKKEVGADRTLKALKFKNGDVDEDNLEALGKLIRTIGSTLDTSKNTLYMTEIFRLMDKIANNKSINSRMRFMIRDLEELRKHNWVPRRKQDKAKTLDDIRKEAEAEARGGGPPGRGGSXXXXXXSDFRGGQGGPQDVRAARRXXXXXXXXXXPIDGFQHQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPSAAPTSLA-SPAQVEEPSEKLVNKINGFVNEFVSEKDKDEALLSFDELPAG--PIPETVSKIIIEKVLEGKPAERPARLDLLRLLASKQKLPQDALERTLDPMIEFITDIAVDSPNADKRLGVCLAVLISEKALVFPFVT-QTVRKHCPGALTKIF 987          
BLAST of mRNA_H-elongata_contig18773.5127.1 vs. uniprot
Match: D7G664_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G664_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 1.390e-93
Identity = 200/383 (52.22%), Postives = 245/383 (63.97%), Query Frame = 1
Query:    1 TKRRMLGNIQFIGELYKKKVLKENVMKTCVEHLLNANRDLDSSNHLKSLKFKSGEIDEDNLEALGKLMATIGFTLDTERNTLYMKEIFRLLDRHANNKSINSRLRFMIRDLDELRRHSWVPRRKQDKAKTLDDIRKEAEADAARGGPGRAGPPRGNSDFRGAPQDARQSRRDXXXXXXXXXGGSGNGPPDRWNNP---HPHPTRR--------RGQW*KLDQQRPGMRESGYPGGVAGDGR--------REDRRMGGVAPRGAYPSQQQQEQAPAPKETLEASDRLRNKINGFVNEFVAIKDEKEALQSFDELPNGEGPIAETVTSIVVEKVIDGNRAERAARLDLLRMLAREKRLPEAALKSALSPILEIIEDIAIDAPGAE 1092
            TKRRMLGNIQFIGELYKK +LKENVMKTCVE LLNA +++ +   LK+LKFK+ ++DEDNLEALGKL+ TIG TLDT +NTLYMKEIFRL+D+ ANNKSINSR+RFMIRDL+ELR+H+WVPRRKQDKAKTLDDIRKEAEA+A  GGP   GP R         +    SR                    R   P   H HP  R        R    ++ +   G   +       G GR        RE R   G A        + +   P  K   E S++L NKINGFVNEFV+ KD+ EAL SFDELP G  PI ETV+ I++EKV++G  AER ARLDLLR+LA +++LP+ AL+  L P++E I DIA+D+P A+
Sbjct:   20 TKRRMLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKKEVATDRTLKALKFKNMDVDEDNLEALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKSINSRMRFMIRDLEELRKHNWVPRRKQDKAKTLDDIRKEAEAEARGGGP--PGPKR---------EGLLPSRLASQALCCLCF---------RCVPPLISHHHPLLRPFFVFTLVRLWGLRVIETGGGAPRAAEAPMTLGAGRGDRKTLEQREGRSREGAAAAARLTEGRLRPTTPGLK-VEEPSEKLVNKINGFVNEFVSEKDKDEALLSFDELPAG--PIPETVSKIIIEKVLEGKPAERPARLDLLRLLASKQKLPQDALERTLDPMIEFITDIAVDSPNAD 379          
BLAST of mRNA_H-elongata_contig18773.5127.1 vs. uniprot
Match: A0A7S2PHU1_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PHU1_9STRA)

HSP 1 Score: 132 bits (333), Expect = 6.620e-30
Identity = 117/415 (28.19%), Postives = 197/415 (47.47%), Query Frame = 1
Query:    4 KRRMLGNIQFIGELYKKKVLKENVMKTCVEHLLNANRDLDSSNHLKSLKFKSGEIDEDNLEALGKLMATIGFTLDTERNTLYMKEIFRLLDRHANNKSINSRLRFMIRDLDELRRHSWVPRRKQDKAKTLDDIRKEAEAD--AARGGPGRAGPPRGNSDFRGAPQDARQSR-----------------------------RDXXXXXXXXXGGSGNGPPDRWNNPHPHPTRRRGQW*KLDQQRPGMRESGYPGGVAGDGRREDRRMGGVAPRGAYPSQQQQEQAPAPKETLEASDRLRNKINGFVNEFVAIKDEKEALQSFDELPNGEGPIAETVTSIVVEKVIDGNRAERAARLDLLRMLAREKRLPEAALKSALSPILEIIEDIAIDAPGAEKYLGECLSVLISEKALQFPFV 1155
            K++MLGNI+FIGEL+KK +LKE VM  CV  LL         N    ++ +   +DE++ EAL +L ATIG T+D+  +   M   F  + + + NK +NSR RFM +DL +LR+++W  RRK++ AKTLD+I+K+ E +  AA+     A     N+ +RG                                       D         G  G+      + P P   +R+       +Q+   ++S  P                            Q++A AP +T    D L+ +I G   E++++KDEKE +   +E    +G  ++   +  +EK +D    ER A + + ++L ++  LPE + + AL+ ILE + D A+D P   +Y+G+ ++ L+  +A++F ++
Sbjct:  719 KKQMLGNIRFIGELFKKSMLKEPVMHECVMSLLKLRNTSTRKNSYTFVELEDNAMDEEDHEALCQLFATIGKTIDSSGSREAMDAYFAKIAKMSKNKKLNSRSRFMYQDLIDLRKNNWKSRRKEEGAKTLDEIKKDFEREERAAQRQSAVA-----NAGYRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVDEDGFSTVPMGRGRRGS------SGPSPSILQRKQMVPPARKQQQSRQQSARPSAS-------------------------QKRASAPLDT----DELKKRIKGVRAEYMSLKDEKEVILCAEEWSGTDG-WSDVFCTESIEKALDCKEDERQAIISMFKILCKKSMLPEKSFEVALTQILEFMNDFAVDIPKVYEYMGDLVANLLLFEAIKFSWL 1092          
BLAST of mRNA_H-elongata_contig18773.5127.1 vs. uniprot
Match: A0A067C5R3_SAPPC (MI domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5R3_SAPPC)

HSP 1 Score: 127 bits (320), Expect = 3.480e-28
Identity = 132/396 (33.33%), Postives = 192/396 (48.48%), Query Frame = 1
Query:    1 TKRRMLGNIQFIGELYKKKVLKENVMKTCVEHLLNANRDLDSSNHLKSLKFK------SGEIDEDNLEALGKLMATIGFTLDTERNTLYMKEIFRLLDRHANNKSINSRLRFMIRDLDELRRHSWVPRRKQDKAKTLDDIRKEAEADAARGGPGRAGPPRGNSDFRGAPQDA--RQSRRDXXXXXXXXXGGSGNG---PPDRWNNPHPHPTRRRGQW*KLDQQRPGMRESGYPGGVAGDGRREDRRMGGVAPRGAYPSQQQQEQAPAPKETLEASDR-----LRNKINGFVNEFVAIKDEKEALQSFDELPNGEGPIAETVTSIVVEK-----VIDGNRAERAARLDLLRMLAREKRLPEAALKSALSPILEIIEDIAIDAPGAEKYLGECLSVLI 1125
            TKRRMLGNI+FIGELYKK +L+E +M  CV  +LN  R   ++   +++ F+      +   DE+++E+L KL+ T+G  L+       M   F  L +   +K ++SR+ FM+ D+ +LR + W PRRK+   KTLD+IRK+ E +AA  G   A   RG+   RG P  A  R   RD XXXXXXXX GS  G   PP R N+     + R       D+   G   +                 G    R A P+  Q+++AP+ K  LEA D      L  K  G ++EFV ++D  EAL    EL      +   + S    K      ++   A R A  D +  L  +K L   A++  L   L +  D+  D P     +GE L+ ++
Sbjct:  857 TKRRMLGNIRFIGELYKKGMLQERIMHECVAKMLNVGRAPPATG--ENVPFRLVPLHPTSPPDEESIESLSKLLTTMGKNLELSSGPHVMAVYFEYLGKLTKDKRLSSRIIFMLMDVIDLRNNKWTPRRKELTQKTLDEIRKDVEKEAANKG---AQATRGSG--RGPPMSASSRDRDRDDXXXXXXXXXGSFRGNQAPPQRSNSNSNFASDRSRSQNNFDRPSQGRPAT----------------FGSAKGRPAKPAPPQKKKAPSIKAQLEALDDDTTSLLAKKARGILDEFVGLQDSAEALACLQELKTSLSAVPSALVSAAFVKEALVVAMEEKAAIRDAFYDCVTALCEKKALEVEAVQFGLETALLLAPDLKCDVPK----IGEHLATIV 1225          
BLAST of mRNA_H-elongata_contig18773.5127.1 vs. uniprot
Match: B8CDK4_THAPS (Eukaryotic translation initiation factor (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDK4_THAPS)

HSP 1 Score: 123 bits (308), Expect = 4.260e-27
Identity = 115/388 (29.64%), Postives = 176/388 (45.36%), Query Frame = 1
Query:    4 KRRMLGNIQFIGELYKKKVLKENVMKTCVEHLLNANRDLDSSNHLKSLKFKSGEIDEDNLEALGKLMATIGFTLDTERNTLYMKEIFRLLDRHANN-KSINSRLRFMIRDLDELRRHSWVPRRKQDKAKTLDDIRKEAEADAARGGPGRAGPPRGNS---DFRGAPQDARQSRRDXXXXXXXXXGGSGNGPPDRWNNPHPHPTRRRGQW*KLDQQRPGMRESGYPGGVAGDGRREDRRMGGVAPRGAYPSQQQQEQAPAPKETLEASDRLRNKINGFVNEFVAIKDEKEALQSFDELPNGEGPIAETVTSIVVEKVIDGNRAERAARLDLLRMLAREKRLPEAALKSALSPILEIIEDIAIDAPGAEKYLGECLSVLISEKALQFPFV 1155
            K++MLGN++FIGELYK  +LKE +M+ C++ L+    D D              +DE++ EAL  L  TIG T+D  +   YM+  F+ +   +++ K+++SR RFM +DL E+R + W  RRK + AKTLD+IRK+AE +        A    G S     RG   D+R SR                GPP             RG                  G V  +     R +GG                      +   ++L  +     NEF    DEKE L S DE+  G     +TV  + VE  ID    ER A ++++ +L +  +L ++ ++  +  ++E I+   +D+PGA  YLGE LS  +  K L   ++
Sbjct:  168 KKQMLGNVKFIGELYKLGMLKEKIMRFCIQSLMKLEEDDD--------------MDEEDHEALCNLFITIGKTIDNPKAQPYMQNYFQKISALSDDTKNLSSRSRFMYKDLIEMRANGWQTRRKLETAKTLDEIRKDAEREERAEAQRAAQQNSGGSYRXXXRGGGYDSRDSR----------------GPP-------------RG------------------GDVRNERNDSQRGIGGXX---------------XXXXEVFTKEKLELRAKNMRNEFKEGHDEKELLMSMDEVL-GSPDAGKTVVQVNVEYAIDCKAPERQALIEMIVILFKNGKLSKSDVQVPMLDMVEFIDSFVVDSPGAFGYLGEMLSAFLDVKTLDIAWL 478          
BLAST of mRNA_H-elongata_contig18773.5127.1 vs. uniprot
Match: A0A448ZNT4_9STRA (MI domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT4_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.730e-25
Identity = 114/393 (29.01%), Postives = 186/393 (47.33%), Query Frame = 1
Query:    4 KRRMLGNIQFIGELYKKKVLKENVMKTCVEHLLNAN-RDLDSSNHLKSLKFKSG--EIDEDNLEALGKLMATIGFTLDTERNTLYMKEIFRLLDRHANNKSINSRLRFMIRDLDELRRHSWVPRRKQDKAKTLDDIRKEAEADAARGGPGRAGPPRGNSDFRGAPQDARQSRRDXXXXXXXXXGGSGNGPPDRWNNPHPHPTRRRGQW*KLDQQRPGMRESGYPGGVAGDGRREDRRMGGVAPRGAYPSQQQQEQAPAPKETLEASDRLRNKINGFVNEFVAI-KDEKEALQSFDELPNGEGPIAETVTSIVVEKVIDGNRAERAARLDLLRMLAREKRLPEAALKSALSPILEIIEDIAIDAPGAEKYLGECLSVLISEKALQFPFVVGHEA 1170
            K++MLGNI+FIG+LYKK ++KE +M+ C+  LLN   +D+ S      + F +G  ++DE++ EA+  +  TIG T+D      +MK  F  + + ++ K + +R RFM +DL +LR  +WVPRRK++KAKT+ +IRK+ E +  +                           D                 +R N  + +  R+R Q   ++    G       G   G G    +      P+    S+ +Q  A  P       ++ + ++    NE++   K+ KE L S DEL  G         S   + ++D    ERAA   LL +L +EK++    +K+ L  I+E I+    DAP A  YLG  L+ +I  +A+   ++ G EA
Sbjct:  801 KKQMLGNIKFIGQLYKKNLIKEKIMRFCIASLLNLETKDVKSK---LPVYFDTGNDDMDEEDHEAISNMFTTIGKTIDKPVTEPFMKVCFGKIKKLSDKKELXARSRFMYKDLLDLRSSNWVPRRKEEKAKTIAEIRKDVEREERQXXXXXXXXXXXXXXXXXXXXXXXXXXXDYRN--------------NRSN--YGNSNRQRSQRPAVETDADGFTTVKGGGSSLGQGPSSQK------PQRILQSKPKQAAAAKPSYPALDEEKFKRRVKTIRNEYIQDPKNVKELLLSVDEL-TGTKDYGSQFVSQNADAMMDCKENERAAMYLLLEILVKEKKISSNDVKTGLVDIIEFIDSFVCDAPFAFDYLGRMLATMIRCEAIDVTWI-GQEA 1166          
BLAST of mRNA_H-elongata_contig18773.5127.1 vs. uniprot
Match: A0A7S0ULU2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0ULU2_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.920e-25
Identity = 123/403 (30.52%), Postives = 205/403 (50.87%), Query Frame = 1
Query:    4 KRRMLGNIQFIGELYKKKVLKENVMKTCVEHLLNAN-RDLDSSNHLKSLKFKSG--EIDEDNLEALGKLMATIGFTLDTERNTLYMKEIFRLLDRHANNKSINSRLRFMIRDLDELRRHSWVPRRKQDKAKTLDDIRKEAEADAARGGPGRAGPPRGNSDFRGAPQDARQSRRDXXXXXXXXXGGSGNGPPDRWNNPHPHPTRRRGQW*KLDQQRPGMR--ESGYPGGVAGDGRREDRRMGGVAPRGAYPSQQQQEQAPAPKETLEAS--------DRLRNKINGFVNEFVAI-KDEKEALQSFDELPNGEGPIAETVTSIVVEKVIDGNRAERAARLDLLRMLAREKRLPEAALKSALSPILEIIEDIAIDAPGAEKYLGECLSVLISEKALQFPFVVGHEA 1170
            K++MLGNI+FIG+LYKK +LKE +M+ C+  LLN   +D+ S      + + +G  ++DE++ EA+  + +TIG T+D      +MK  F  +++ +++K++ +R RFM +DL +LR ++WVPRRK++KAKT+ +IRK+ E +                  R   Q+A Q++ +    XXXXX        D  N    +    R +     QQRP +   + G+   V G      +  GG +   A   + Q+     PKE   ++        D+   +I    +E++   K+ KE L S DEL  G         S   +++ID    ER A  +LL +  +E+++  + +K+ L  ++E I+    DAP A  YLG  L+ +I   A+   ++ G EA
Sbjct:  581 KKQMLGNIKFIGQLYKKNLLKEKIMRFCIASLLNLETKDVRSK---LPVYYDTGKDDMDEEDHEAICNMFSTIGKTIDKAATAGFMKVCFGKIEKLSDSKTLPARSRFMYKDLLDLRFNNWVPRRKEEKAKTIAEIRKDVEREE-----------------RKQAQEAAQAQGNYRGNXXXXXXXXXXXX-DYRNXXRSNYANNRSR-----QQRPVVETDDDGFTTIVGGA----KQMRGGSSLAPAASQKPQRILQSKPKEAAASAKTHPPLDDDKFDRRIKSIRSEYIQDPKNLKELLLSMDEL-TGTKDYGSKFVSKNADRMIDCKEDERVAIYNLLEICVKERKISSSDVKAGLVDVVEFIDAFVCDAPLAFDYLGRMLATMIRCNAIDVTWI-GQEA 951          
BLAST of mRNA_H-elongata_contig18773.5127.1 vs. uniprot
Match: A0A024USE0_9STRA (MI domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USE0_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.600e-24
Identity = 115/387 (29.72%), Postives = 179/387 (46.25%), Query Frame = 1
Query:    1 TKRRMLGNIQFIGELYKKKVLKENVMKTCVEHLLNANRDLDSSNHLKSLKFKSGEIDEDNLEALGKLMATIGFTLDTERNTLY---MKEIFRLLDRHANNKSINSRLRFMIRDLDELRRHSWVPRRKQDKAKTLDDIRKEAEADAARGGPGRAGPPRGNSDFRGAPQDARQSRRDXXXXXXXXXGGSGNGPPDRWNNPHPHPTRRRGQW*KLDQQRPGMRE----SGYPGGVAGDGRREDRRMGGVAPRGAYPSQQQQEQAPAPKETLEASDRLRNKINGFVNEFVAIKDEKEALQSFDELPNGEGPI--AETVTSIVVEK----VIDGNRAERAARLDLLRMLAREKRLPEAALKSALSPILEIIEDIAIDAPGAEKYLGECLSVL 1122
            TK+RMLGNI+FIGEL++K +L+E +M  C+  LLN  R  +  ++  +        DE+++E+L KL+ T+G   D E   +Y   M E F  L     +K ++SR+ FMI D+ +LR++ W PRRK+ K KTL++ RK+ E + A       GPP      RG       S RD             +GP  R   P P           LD+ R    +    SG P   A  G+ +    GG  P    P+  +Q      + + +  D +       + E+VA+ D KE      EL   + P   A  V+S++V++     ++   A R    D L  L  +K+L   A+K  L  ++    +I  D P   ++LG  ++ L
Sbjct:  800 TKQRMLGNIRFIGELFRKGMLQERIMHACILKLLNVMRVPNREDYKIAPLNPKAAPDEESIESLSKLLTTMG--KDLEAQHMYPGAMVEYFNYLTYLTKDKRLSSRINFMILDVIDLRKNRWEPRRKELKQKTLEETRKDYEKELASAAKKHGGPP----PTRGVVSST--SARDMSQR---------SGPSSRGGQPPPRSNF------NLDKSRSKQFDKPNASGRPASFASVGKGKGL-SGGRPPVVEKPAPVKQIADQLAQVSDDTKDLIAKNAKSILEEYVALMDTKEVASCVVELKTRQAPAVSAHLVSSLIVKEGLKLAVEAKDATREGIFDALVFLFEDKQLEADAVKYGLESVILFAPEIVYDVPKINQHLGSIIARL 1162          
BLAST of mRNA_H-elongata_contig18773.5127.1 vs. uniprot
Match: A0A7S1D4U0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4U0_CYCTE)

HSP 1 Score: 111 bits (277), Expect = 3.470e-24
Identity = 64/140 (45.71%), Postives = 98/140 (70.00%), Query Frame = 1
Query:    4 KRRMLGNIQFIGELYKKKVLKENVMKTCVEHLLNA--NRDLDSSNHLKSLKFKSGEIDEDNLEALGKLMATIGFTLDTERNTLYMKEIFRLLDRHANNKSINSRLRFMIRDLDELRRHSWVPRRKQDKAKTLDDIRKEAE 417
            K++MLGNI+FIG+LYKK +LKE +M+ C+  LL    N  + S N  + L     ++DE++ EA   + ATIG T++T + + +++  F  + + +NNKS+++R RFM +DL ELR++ W PRRKQ+KAKTLD+IRK+ E
Sbjct:  127 KKQMLGNIKFIGQLYKKGLLKEKIMRYCIASLLKLKENPAIQSKNP-EYLDKGDMDMDEEDHEAACNMFATIGKTIETPQASSFLRVCFDKMTKLSNNKSLSARSRFMYKDLLELRQNRWEPRRKQEKAKTLDEIRKDVE 265          
BLAST of mRNA_H-elongata_contig18773.5127.1 vs. uniprot
Match: A0A1V9YEM4_9STRA (Eukaryotic translation initiation factor 4 gamma n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YEM4_9STRA)

HSP 1 Score: 115 bits (288), Expect = 4.760e-24
Identity = 119/387 (30.75%), Postives = 174/387 (44.96%), Query Frame = 1
Query:    1 TKRRMLGNIQFIGELYKKKVLKENVMKTCVEHLLNANRDLDSSNHLKSLK--FKSGEIDEDNLEALGKLMATIGFTLDTERNTLYMKEIFRLLDRHANNKSINSRLRFMIRDLDELRRHSWVPRRKQDKAKTLDDIRKEAEADAARGGPGRAGPPRGNSDFRGAPQDARQSRRDXXXXXXXXXGGSGNGPPDRWNNPHPHPTRRRGQW*KLDQQRPGMRESGYPGGVAGDGRREDRRMGGVAPRGAYPSQQQQEQAPAPKETLEASDR-----LRNKINGFVNEFVAIKDEKEALQSFDELPNGEGPIAETVTSIVVEK-----VIDGNRAERAARLDLLRMLAREKRLPEAALKSALSPILEIIEDIAIDAPGAEKYLGECLSVLI 1125
            TKRRMLGNI+FIGELYKK +L+E +M  CV  +LN  R          L     +   DE+++E+L KL+ T+G  L+     + M   F  L +   +K ++SR+ FM+ D+ +LR + W PRRK+   KTLD+IRK+ E + A      AG  R     RG P    QS RD         GGS         +      R R Q    D  R G    G  G  A  G+           R A    +++++APA K  LEA D      L  K    ++EFV ++D  EA     EL   +  +A  + S    K      ++  +A R    D +  L  +K L   A++  L   + +  D+  D P    +L   ++ L+
Sbjct:  845 TKRRMLGNIRFIGELYKKGMLQERIMHECVAKMLNVTRAPGEDGRPFRLVPVHPTQPPDEESIESLSKLLTTMGKNLEASSGPIVMSIYFEFLGKLTKDKRLSSRITFMLMDVIDLRNNKWQPRRKELTQKTLDEIRKDVEKEHASKA---AGAQRTGGASRGLPPS--QSSRDRDNSR----GGSFXXXXXPQRSSSFAVDRSRAQ--NFDATRSG----GPQGRPASFGKG----------RPAKAPVKEKKKAPAVKAQLEALDEDVVATLGKKAKAILDEFVGLQDVAEAAACLQELKTAQAAVAPLLVSAAFAKQALVGALEEKQATRDGYFDAVAALLEQKALEPEAVQFGLETAVLLAPDLVCDVPKIGDHLAAIIARLM 1206          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18773.5127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBU9_9PHAE3.350e-10555.53MI domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G664_ECTSI1.390e-9352.22Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus... [more]
A0A7S2PHU1_9STRA6.620e-3028.19Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A067C5R3_SAPPC3.480e-2833.33MI domain-containing protein n=2 Tax=Saprolegnia T... [more]
B8CDK4_THAPS4.260e-2729.64Eukaryotic translation initiation factor (Fragment... [more]
A0A448ZNT4_9STRA1.730e-2529.01MI domain-containing protein n=1 Tax=Pseudo-nitzsc... [more]
A0A7S0ULU2_9STRA2.920e-2530.52Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A024USE0_9STRA2.600e-2429.72MI domain-containing protein n=1 Tax=Aphanomyces i... [more]
A0A7S1D4U0_CYCTE3.470e-2445.71Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1V9YEM4_9STRA4.760e-2430.75Eukaryotic translation initiation factor 4 gamma n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18773contigH-elongata_contig18773:2328..6994 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score223.8
Seed ortholog evalue7.3e-56
Seed eggNOG ortholog2880.D7G664
KEGG koko:K03260
KEGG Pathwayko03013,ko05416,map03013,map05416
KEGG ModuleM00428
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016281,GO:0032991,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.translation initiation factor activity
EggNOG OGsKOG0401@1,KOG0401@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03012,ko03019
Hectar predicted targeting categoryother localisation
Exons7
Model size1206
Cds size609
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930072.5871449-UTR-H-elongata_contig18773:2327..24391622930072.5871449-UTR-H-elongata_contig18773:2327..2439Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18773 2328..2439 -
1691679270.4670942-UTR-H-elongata_contig18773:2327..24391691679270.4670942-UTR-H-elongata_contig18773:2327..2439Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18773 2328..2439 -
1622930072.59969-UTR-H-elongata_contig18773:3011..32381622930072.59969-UTR-H-elongata_contig18773:3011..3238Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18773 3012..3238 -
1691679270.4767623-UTR-H-elongata_contig18773:3011..32381691679270.4767623-UTR-H-elongata_contig18773:3011..3238Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18773 3012..3238 -
1622930073.5412567-UTR-H-elongata_contig18773:3948..41941622930073.5412567-UTR-H-elongata_contig18773:3948..4194Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18773 3949..4194 -
1691679270.4841726-UTR-H-elongata_contig18773:3948..41941691679270.4841726-UTR-H-elongata_contig18773:3948..4194Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18773 3949..4194 -
1622930073.6434095-UTR-H-elongata_contig18773:6982..69941622930073.6434095-UTR-H-elongata_contig18773:6982..6994Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18773 6983..6994 -
1691679270.5427144-UTR-H-elongata_contig18773:6982..69941691679270.5427144-UTR-H-elongata_contig18773:6982..6994Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18773 6983..6994 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930073.5711896-CDS-H-elongata_contig18773:4194..41961622930073.5711896-CDS-H-elongata_contig18773:4194..4196Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18773 4195..4196 -
1691679270.4919794-CDS-H-elongata_contig18773:4194..41961691679270.4919794-CDS-H-elongata_contig18773:4194..4196Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18773 4195..4196 -
1622930073.589781-CDS-H-elongata_contig18773:4618..47941622930073.589781-CDS-H-elongata_contig18773:4618..4794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18773 4619..4794 -
1691679270.5069945-CDS-H-elongata_contig18773:4618..47941691679270.5069945-CDS-H-elongata_contig18773:4618..4794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18773 4619..4794 -
1622930073.603331-CDS-H-elongata_contig18773:5168..52661622930073.603331-CDS-H-elongata_contig18773:5168..5266Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18773 5169..5266 -
1691679270.5182223-CDS-H-elongata_contig18773:5168..52661691679270.5182223-CDS-H-elongata_contig18773:5168..5266Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18773 5169..5266 -
1622930073.6214793-CDS-H-elongata_contig18773:5758..59171622930073.6214793-CDS-H-elongata_contig18773:5758..5917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18773 5759..5917 -
1691679270.5258553-CDS-H-elongata_contig18773:5758..59171691679270.5258553-CDS-H-elongata_contig18773:5758..5917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18773 5759..5917 -
1622930073.6327493-CDS-H-elongata_contig18773:6808..69821622930073.6327493-CDS-H-elongata_contig18773:6808..6982Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18773 6809..6982 -
1691679270.5341344-CDS-H-elongata_contig18773:6808..69821691679270.5341344-CDS-H-elongata_contig18773:6808..6982Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18773 6809..6982 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18773.5127.1prot_H-elongata_contig18773.5127.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18773 4195..6982 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18773.5127.1

>prot_H-elongata_contig18773.5127.1 ID=prot_H-elongata_contig18773.5127.1|Name=mRNA_H-elongata_contig18773.5127.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
MLGNIQFIGELYKKKVLKENVMKTCVEHLLNANRDLDSSNHLKSLKFKSG
EIDEDNLEALGKLMATIGFTLDTERNTLYMKEIFRLLDRHANNKSINSRL
RFMIRDLDELRRHSWVPRRKQDKAKTLDDIRKEAEADAARGGPGRAGPPR
GNSDFRGAPQDARQSRRDRERDRERDRGGSGNGPPDRWNNPHPHPTRRRG
QW*
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mRNA from alignment at H-elongata_contig18773:2328..6994-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18773.5127.1 ID=mRNA_H-elongata_contig18773.5127.1|Name=mRNA_H-elongata_contig18773.5127.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4667bp|location=Sequence derived from alignment at H-elongata_contig18773:2328..6994- (Himanthalia elongata Himel1 dioecious)
ACGAAGAGGAGGATGCTGGGCAATATCCAGTTCATCGGAGAGCTGTACAA GAAAAAGGTGCTGAAGGAGAATGTGATGAAGACCTGTGTAGAGCATCTCC TGAACGCTAACAGGGACCTTGACTCCTCGAACCACCTCAAGAGCCTCAAG TTCAAGAGTGGAGAAATCGACGAAGACAATCTTGAGGTATGTTTTTGCGT TGGATGGCGCGACGGGGTCTGTAGGCGGCGTGTTTATATATATATATATA CAAATATATATATGGTATGGGCGTCCGATAAAGAGGGAAGTCAGTGGGAG CGGGAGCAGTTAGCCTTTGTACCGTTGTGTATTTAAACCCTATGGAACTC GATCTGTTTTTTAGATCCTAAATTCAATATAAACTTGAAATCCAGTTCCA AAAGGGTTAATTAAATTGCACATAACCGCGCTCTCCGGCTGTCGCACTAT GGTTCTTGCGATGGTCCTCCTCATATTGTGTATACAGCCAACGTGGGTTA TCTCGATAGGATTTCGAGGTTTATGCGACCGGGTGTGTATCCTTCCCTTC ATCCTTCCTCCCTATTTACACTACTAATACTAAGCTTTGGGAGCCAAATT CTTATGTTTTTTCTTTTTTAGGTTTTGTTTTAACTTGTGGCCAACTTTTA TTTTTTCTCAGGAGGGTTACCATCACCGCTCCTCCAATCATGATCTAGAC GTACTGACTAACAAACAACCCAAATTTTTCAATTTTTGGTCCAATCTTTC GTAAACTGTTGATAAAAAAATTGGGGATAAAGATATCCTCCCCTCCCTTA AAAATATCCCCACCGTTACTTCGAAGGGAGTTCGCGCTGTAGATGCCAAT ATTTTTCAGACGGGGCCATTTTTTTATCCCCGGCCTTGTTTTATTTACTT TTCTGCATTAAGTCCAAGTGTGTGGTCGCCAAAGAGCATGTGTAAGGGTC AACAAAATCATCACCTTATGATGGGTAGTGCTATTAGCAGTTAAATATTC TTGATATATTTTCGACGTTTGTTTTGGCTTGTTTTCTGACGTTTTTCTGT TTTTGTTGCTGTTTTCTTTTTCCTCAGGCTCTGGGCAAGCTGATGGCCAC AATCGGATTTACTCTCGACACCGAAAGGAATACGTTGTACATGAAGGAAA TCTTCCGTCTGCTTGACAGACACGCCAATAATAAATCCATCAACTCCCGG TTGAGGTTCATGATCAGAGACCTTGATGAGCTCAGGGTTAGTAAAGTCTA AATATTTGTATTCCAAAACCCTTTGCTTCGATACTCACGTACACCTCACA AACTCCCAAAAGAAAAATACGAAAATATGTATTCACAAATTATTTTTATT TAAAAGACTTTAGGCTCATTCTCACTCTCCTCCAGTTTGAAGTGAATGTA AAACTGGTACTTGTTTTACTCATAGGTAGTGATGTACACACGCTCAAACA TCTCATGTTTCAGAGGGTTACGTTGAGTTCATTTCTTTTTAATAGAAATT ATATTATTTCATCGTCAGAGGCTCATTGGTCAAAATGCTTTTGTTAGAAT ATTGTTGATATCATATATAATAAAATGTCCGAGGGTTTTAATAAGTTTAC AGATATTTATATGAATATATATATATATATATATATATGTACTTTTTTTT TTAAATGACAAAGCGCTTGTATTTTGTTTTTTCCCGGTGTCATATTTTTA AACATATTCATTCTTTTTTTTAATTCAGAGGCACAGCTGGGTCCCGCGCA GAAAGCAGGACAAGGCTAAGACCCTCGACGACATTCGGAAGGAAGCAGAA GCGGATGCTGCCAGGGGCGGACCGGGGTATGAATGACTGACTATCTGCCT TTGTATCTCAACGGCTTCTTGAAGGAACAAAAAAAGAGTACCAGATCTCT TTTTTTTGTATCCAAATCCACACAGCACTTAAATTAAAGCGTGAAAAGCT TGCGTGCGGGACAGGGGAGAAAGGAGGGAAAACAAATAAACTTTTCGGCA TTTATTTTTCGGTTTGTCTAAAATGTTTGTGCGTGTTAGTGCGCTCTGTA GAGGCGCGATTTTTGTGGCTTACTTAAGGCGGAAAAGTGGCTTGACATAT CCCATATCATGGAACAGGCATTTTTTTTTATAACTATTATATAGACAAGA TAATCCATCCCCCCCCCCACCTCTTTTTTCTCGGTATTGTTTTGGAACAG GAGGGCCGGTCCGCCGCGGGGCAACTCAGATTTCAGGGGGGCGCCTCAGG ACGCTCGACAGTCCAGACGAGACAGGGAGAGGGACAGGGAGAGGGATCGT GGCGGGAGTGGTAATGGTCCTCCTGACAGGTGGAATAACCCCCATCCCCA CCCCACGAGGAGGCGTGGTCAATGGTGTAACAGTGAAGGCGTGGAAAACT GACAGTCTCCCTGCCCCCCCTCTACACACTGCTATAGTTACCGCTTAATA TGTTAAATGTGTTGATATTTTGGTTACCCGGTGTTATATTTTAATAGAGA ATGTCGCCAATTTCTTGGTGCTGTGGATGCCATCTAAAGTATTTTCGCCA ATATTATCGCTGAATACAGACATGCTGTTTATTGATGTACTGTTAATGAC CGTACGGTACGTCCTCTGTTTGCTATACATGTTAATATCTCACAAAAATG TGCAGCTACCGAGACCGGGGAGGAGATCGACGATCGATTGATGGACGAGA CAGAGACAGTCGGCAAGACAACACCAGATATAGTGGCGGGAGGATCGGAG GAGGCGACCCTTCCCGATCCACCATTAGGGGAGGGGGCATCATCGGAGGA AAGCTTGACCAGCAGCGACCTGGGATGCGCGAGTCGGGGTACCCGGGCGG GGTTGCCGGTGATGGTCGAAGAGAAGACCGAAGGATGGGAGGCGTTGCTC CGCGGGGGGCGTACCCATCACAGCAGCAACAAGAGCAGGCGCCGGCACCC AAGGAGACCTTGGAGGCGAGCGACAGGTTGCGGAACAAGATCAACGGGTT CGTTAATGAGTTCGTGGCCATCAAGGACGAAAAGGAGGCACTGCAGGTTT GCGCTGGGCTGTTGTTCTTCCACGAAGTAGCCGTTGGATGTGTATGTATG TGTGAGATTGTGTTCAATGCAGACGATGTCTCAAGAAACGATCGCCACTA TATAATGCCCGATGCTTGTTATTGGGATGATTTAAGTTCGCAGTGGCTGG TCAAGTTTTTTTTTTTCAACTCTACAACCCGTGTTTTAGCTGTCGAGAAG GAGTTTTTTTAATTGTATCTGAAGGGGGTGAAAAAGGGTTGGCTTGTCGT TGTCTTAGTTTTGGTTGGATTTTGATAGGCGTGTTTGTTAGACAGAGGAC CTCATCGCTTCATGTTGATCCTTTAAAAAAAAACTGCTTAAGAGACTCTG CCGCCTCGACCTCTGGCGTGTGTTGTGGTTTCGGAGAATGGGAAGCGAGA AAACAGGGATAATTGTGGGATGGATGTTCTGTGTCGAAGCAGGGCGAAAA TATTTGTCTTTGATCGATCATTTGGAAACATCGCTCTTTCTTTTCTAGAA CGCATAGTCATGGTGTAAGAAACCTAACATACTAAGGCATTCGAACTTGA GAACGCCTCGTTTTGTTTCTGGAGGAGCATCGACAACAGAAGTCTTGTAC CCCGCTCCACCTATTTATCTTTCCGCATTGTGTGCTTATTTCCACTCTAC GCTGCTTTCGTCGTTTCAATGTATTTTGATGTTTTTATTGTGTGGCGTTT CAACAGTCGTTTGATGAGCTTCCGAATGGAGAAGGGCCGATCGCTGAGAC GGTCACCAGTATCGTGGTGGAGAAGGTAATCGACGGGAACAGGGCCGAGC GGGCTGCGAGACTGGACCTGTTGCGGATGCTGGCTCGAGAGAAGCGGCTG CCCGAGGCGGCCCTGAAGAGCGCGCTCTCCCCCATTCTGGAGATTATCGA GGACATAGCGATCGATGCTCCCGGTGCCGAAAAGTGAGTTTTCCATTCTC CCCATGCGAATGTTGCTTTTGATGTAGCTTTTGCTTTTCGGTGCGCGATT TCTCAGACTCTATTCGCGATCTATATTTTTTTACGACATTTTAGCGTTGC GGTAGTGGGGGACGGGGGTATACAAGGTGGCGGCTGTCAGACTTTGCGTT TTCGTTAATATTGGTGCTGCCCGAAACCGGACCGAGGGGGGGGGGAGGGG GGCTAGAAAACACAAGCCTCCTCGAGTACCCTGCACTGTGCGTTGATACG AGCATGTATTTTATGTTAAGTCGCGAGTGAGCGTTTTCTTGCTGTTTTAA GGCTTTGAAAATTTACCTCTATCCTCTCGTACCACGTTAAAGCTTGGGTG TTGTGTGTTGTCAAGGGTTTTATTGAGAGGGGGGGGGGGATCGGGGGGGA AAACAATGTTTCTATCTACGTATATGCCCAAAATACTAAATGTATTACGT ATGGTTTGTAGTATGCACCGCCGCCCGCGCCTAACACAGCCATTGCTACT TAGATCAGAGCATCCATCTCCTCAACTGGTCGTGTACCCATCCCCCTTTG CTCAGGTATCTGGGTGAATGCTTATCGGTGCTGATATCAGAGAAGGCGTT GCAGTTTCCGTTCGTGGTGGGACATGAGGCCTTGGGACGCTGCCCCAAAG CAGTGCCCAAGATATTT
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Coding sequence (CDS) from alignment at H-elongata_contig18773:2328..6994-

>mRNA_H-elongata_contig18773.5127.1 ID=mRNA_H-elongata_contig18773.5127.1|Name=mRNA_H-elongata_contig18773.5127.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at H-elongata_contig18773:2328..6994- (Himanthalia elongata Himel1 dioecious)
ATGCTGGGCAATATCCAGTTCATCGGAGAGCTGTACAAGAAAAAGGTGCT
GAAGGAGAATGTGATGAAGACCTGTGTAGAGCATCTCCTGAACGCTAACA
GGGACCTTGACTCCTCGAACCACCTCAAGAGCCTCAAGTTCAAGAGTGGA
GAAATCGACGAAGACAATCTTGAGATGCTGGGCAATATCCAGTTCATCGG
AGAGCTGTACAAGAAAAAGGTGCTGAAGGAGAATGTGATGAAGACCTGTG
TAGAGCATCTCCTGAACGCTAACAGGGACCTTGACTCCTCGAACCACCTC
AAGAGCCTCAAGTTCAAGAGTGGAGAAATCGACGAAGACAATCTTGAGGC
TCTGGGCAAGCTGATGGCCACAATCGGATTTACTCTCGACACCGAAAGGA
ATACGTTGTACATGAAGGAAATCTTCCGTCTGCTTGACAGACACGCCAAT
AATAAATCCATCAACTCCCGGTTGAGGTTCATGATCAGAGACCTTGATGA
GCTCAGGGCTCTGGGCAAGCTGATGGCCACAATCGGATTTACTCTCGACA
CCGAAAGGAATACGTTGTACATGAAGGAAATCTTCCGTCTGCTTGACAGA
CACGCCAATAATAAATCCATCAACTCCCGGTTGAGGTTCATGATCAGAGA
CCTTGATGAGCTCAGGAGGCACAGCTGGGTCCCGCGCAGAAAGCAGGACA
AGGCTAAGACCCTCGACGACATTCGGAAGGAAGCAGAAGCGGATGCTGCC
AGGGGCGGACCGGGAGGCACAGCTGGGTCCCGCGCAGAAAGCAGGACAAG
GCTAAGACCCTCGACGACATTCGGAAGGAAGCAGAAGCGGATGCTGCCAG
GGGCGGACCGGGGAGGGCCGGTCCGCCGCGGGGCAACTCAGATTTCAGGG
GGGCGCCTCAGGACGCTCGACAGTCCAGACGAGACAGGGAGAGGGACAGG
GAGAGGGATCGTGGCGGGAGTGGTAATGGTCCTCCTGACAGGTGGAATAA
CCCCCATCCCCACCCCACGAGGAGGCGTGGTCAATGGTGAGGGCCGGTCC
GCCGCGGGGCAACTCAGATTTCAGGGGGGCGCCTCAGGACGCTCGACAGT
CCAGACGAGACAGGGAGAGGGACAGGGAGAGGGATCGTGGCGGGAGTGGT
AATGGTCCTCCTGACAGGTGGAATAACCCCCATCCCCACCCCACGAGGAG
GCGTGGTCAATGGTGAGA
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