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Homology
BLAST of mRNA_H-elongata_contig1877.5124.1 vs. uniprot
Match: D7FMW8_ECTSI (Inositol triphosphate receptor (IP3R)/ Ryanodine receptor like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW8_ECTSI) HSP 1 Score: 891 bits (2303), Expect = 2.060e-279 Identity = 652/1552 (42.01%), Postives = 820/1552 (52.84%), Query Frame = 1
Query: 1 MLRVGERVLLLALRDDPNKNPLGYLSSRLLTDVEGKSSLVTLDCTLSPFRDVPPGEKSFEPVAVSNCIFRVEACMDRHDASRANATQRRVDAGIATHTGIQPGIPVRYSKAIQLMHEVSGALLCIDVRERAANEGFAMKVVLKTVETSSDDMVVSDDWLDTWWELRSPENVRISQLLHFDEICLHSNRWHRSLRAQPTAAARKKIGEGCVDRGTGSPP----MLGINSVVSQDDCPGEVDASFTASLLRVVPFDDYPSPPASDDIQALEFSTTMLSSA-TSFSSSLRSPMSSVGDSGRFPAAFPG-GTTD----GEMVKRG-LRGGDTVRLCHLTSSGFLTHETVPTTP------------PKSYGMTGGNGATEGD-----IAASIKKRYHDDGGHFGAFLYVSTTPQRLQKLQNASSNCLWVLERTHCALGGRPLRRTAERKA----------------------------------------------------------PARGALSAGTAGFRSGAEAEYGRRHSDTCDGA---------------LAFSVDGPPSST---SIGLNMSADTVANLTRRQGAGDAVEYVRIKHLATMRYLCVGKKCDPVPVEGGEEDLDGRNENSAQGKGGKRGR-------------GKGKRFVFPRVGMVTVERRAALPAATVFAIRPRSTG--------GVVAASTGGI---LGSTDLVHLQHRETGFFLAAMPREIEAGDERVELTVVKSPLTSEYWRITRASEREKNATNHILRALAQLKAALKPLLDEVDRLPLY--IGER------------SISHCPPPVPSARVLRPATIAVAHFHSVIARGVGWWL------KREPKG--ADRAMSGATRASVQEGPRIAGQKLKGLGERTGRGAA----VWALARSTSSDMAEDSGLIRKKDRARGS-LNSGKYSGVWSVVSAGVTGGS---------SADSTSLDEFYGNPKLGFQLLLREQGVIVALFNAMEKIFRARDNLLMNTLWWEDT--EIVSVSTQ---------------HTSLGDTSEAEGAANGENGV--ENAEARLILRRLVREAMALADFFAKDHVRGKMVLEPFTLLLREMIGSGLGACELLATIRRDNPRTHLNVTAKRIQEIVGSLPESRDLANSMRLMASICRIGHALLPTVQRLVAVTALVG-------------------------------------------DNASASFDHAGSIFGSAD------------------VNTTSTTTISVSGSSIAHGGDGIVNGDSDGSEEVQKDEMDDEVLDREREARMRAGTGAGVGERRSVTFNNPRGLFRYELISNAEPSGRRVGSRRRGKGHSFSYERNQAPWWSADGTRGIRVKLEGLVKNPLPTRGQLPRLKELL-AQRRMSSNEVVVFEAWLEGGGS-SRTVVRVVSRGGLEEFS-----GGRG---GAGASSSAGDLLEYFVESVKLMSTLCRERHAENIVLLRAMKGTTYKELMEVVRCETVPISVRGAFALLVERMHLDVAPLLPQPAIRYDR-KDE 3891
MLRVGERVLLLAL ++ +K+PLGYLSSRLL D EG+SS TLDC+L+ FRD PP E+S+EPV VS+C+FRV AC+DRHDA+RA+ +QR ++ G H G+QPG PVRYSKA+QL+HE SGALLCIDV+ERA +EGFAMKVVLK ++ S D +D + +TWWE++SP NVRISQ+LH+DEICLHSNRW RS+RA PT R+++ G G++ + ++ PG V ASF+ SLLRVVP+DD PS P SD+ L +TT ++ S S P DS P A G GT D G G +RGGD VRLCHL S+GFLT E V TP P+ G G + ++ + D G G FLY+S TP R KLQNASSNCLWVLERTHCALGGRPLR + A E + SD G S P SS G + A+ VA RRQGAGD VEYVRIKHLATMRYLCVGKKCDPV GG +A G G G RVGM+TV++ AA+PAATVF IRPR T G AA G LG DLVHLQH+ TG FL+A+P E A + LT+VKSPLT+EYWR+ RA ERE+ ATNHIL A AQLKA+L LL E++++P + G++ S ++ PPVP AR +RPA +AV+HFHSV++RG W K+ P + R S A + + P G+ L +GER G+ ++ + + RK++R+R + L ++GV+ S+ SLDEF+ NP+L FQLLLREQG++V LF +M IFR +D +L LWW+D E S ST T +G T G+ E + + + AR LR+ V +AMALADFFA+D+ RGK VLE FT LLR +IGSGLGACE+LATIRRDNPRT+ VT RIQ+I+ +LPESRDLANSMRL+ SIC++GH+LLP++QRLVAVT LVG D +H S+ S + + TT V S A G+ G AG GA V + G + IS++ S RR S R G +F SADGT+GIRV+L+ LV + QL R +ELL + R+SS E V+FEA EG GS SRTVVRV+SRGG E G RG GAG SS+AGDLLE FVESV+L+++LC+ERH NI L+R++KGTTYKELMEVVR ETVP +VR AFA L+E HL+VAPLLP+P +RY R KD+
Sbjct: 1 MLRVGERVLLLALSEERDKHPLGYLSSRLLMDAEGRSSFATLDCSLTSFRDAPPAERSWEPVVVSDCVFRVAACVDRHDATRASQSQRNLEPGNTVHRGMQPGTPVRYSKAVQLVHEFSGALLCIDVQERAESEGFAMKVVLKAIDPPSGDGGSTDGYKNTWWEVKSPGNVRISQVLHYDEICLHSNRWDRSVRAHPTLLDRQRVTSATEVEGESGTEEAGAATGLSPTLPREKYPGAVHASFSHSLLRVVPYDDCPSLPYSDE--GLSIATTSAATVMASASGGWPGP-----DSSSSPHALAGSGTADTPVGGVADDAGAIRGGDVVRLCHLRSTGFLTCEVV--TPEAFPRGGWAQPEPRMVGQAGXXXXXXXXXXXXXVDGPVQGQASDGGVGGGPFLYISATPHRRLKLQNASSNCLWVLERTHCALGGRPLRGSCASAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATERQRWNSDSDYFPGGNXXXXXXXXXXXXXXXXXSGTRPSSSFPGGGFGRDTYAEAVAKRRRRQGAGDPVEYVRIKHLATMRYLCVGKKCDPVRGGGGV---------NAGGDAGASGTPATXXXXXXXXXXXAAADAAATRVGMLTVDQHAAVPAATVFVIRPRRTAAAGAEGLVGPAAAEGAGADRWLGPEDLVHLQHKNTGLFLSALPLENTAKGG-IGLTMVKSPLTTEYWRLARAPERERMATNHILTAQAQLKASLDSLLVEIEKMPPFDAAGKKNNTDGRAPAAPPSAAYLYPPVPYARFIRPAALAVSHFHSVLSRGAAWXXXXXXGTKKFPPSVSSSRGHSLAGHSGGGDAPSAGGRGLMSMGERLGKASSSSRRISVXXXXXXXXXXXRVIIGRKRERSRHNVLGXXXXXXXXXXXASGVSXXXXXXXXXXXXSSLMISLDEFHANPRLRFQLLLREQGIVVQLFESMWTIFREQDGILARHLWWDDDAEESASGSTTVSIGPPAFSATPRSGATRVGGTDVGGGSNTDEWEIRRDRSAARHCLRQFVVQAMALADFFARDNPRGKAVLENFTPLLRMLIGSGLGACEVLATIRRDNPRTYAVVTPARIQQILATLPESRDLANSMRLLRSICKVGHSLLPSIQRLVAVTVLVGVDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSDEXXXGGEHGVSVAASLEGEENHLLRNPRSLFRYELIRDMDVTTSDVDASGAAXXXTSTDRGNGSGG--------------------TLAG-GASVSRPSLTPSASESGRGKASSISSSVKSQRRRPSLRAASGTNFR---------SADGTKGIRVRLKRLVAG-VSMGEQLRRRRELLNGETRVSSGEGVIFEAVQEGSGSASRTVVRVLSRGGAGEPPVEGPWGPRGSGRGAGPSSAAGDLLELFVESVRLLASLCQERHKGNIALVRSLKGTTYKELMEVVRSETVPPTVRAAFAQLLEHCHLNVAPLLPRPPVRYVRLKDD 1502
BLAST of mRNA_H-elongata_contig1877.5124.1 vs. uniprot
Match: A0A6H5KQK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK2_9PHAE) HSP 1 Score: 363 bits (932), Expect = 9.110e-100 Identity = 295/732 (40.30%), Postives = 380/732 (51.91%), Query Frame = 1
Query: 2029 PPVPSARVLRPATIAVAHFHSVIARGVGWWLKREPKGAD-----------RAMSGATRASVQEGPRIAGQKLKGLGERTGRGAAVWALARSTSSDMAEDSG----LIRKKDRAR----GSLNSGKYSGVWSVVSAGVTGGS-SADSTSLDEFYGNPKLGFQLLLREQGVIVALFNAMEKIFRARDNLLMNTLWWEDT--EIVSVSTQ--------------HTSLGDTSEAEGAANGENGV--ENAEARLILRRLVREAMALADFFAKDHVRGKMVLEPFTLLLREMIGSGLGACELLATIRRDNPRTHLNVTAKRIQEIVGSLPESRDLANSMRLMASICRIGHALLPTVQRLVAVTALVGDNASASFDHAGSIFGSADVNTTSTTTISVSGSSIAHGGDGIV------NGDSDGSEEVQKDEMDDEVLDREREARMRAGTGAGVGERRSVTFNNPRGLFRYELISNAE--PS-------------------------GRRVGSR----------RRGKGHSFSYE---RNQAP---------WWSADGTRGIRVKLEGLVKNPLPTRGQLPRLKELL-AQRRMSSNEVVVFEAWLEGGGS-SRTVVRVVSRGGLEEFS-----GGRG---GAGASSSAGDLLEYFVESVKLMSTLCRERHAENIVLLRAMKGTTYKELMEVVRCETVPISVRGAFALLVERMHLDVAPLLPQPAIRYDR-KDEQFDVRCN 3912
PPVP AR +RPA +AV+HFHSV++RG W R+++G + + P G+ L +GE G+ + + RK++R+R G L G SGV S+ SLDEF+ NP+L FQLLLREQG++V LF AM + D +L LWW+ E S ST T +G T G+ E + + ++AR LR+ V +AMALADFFA+D+ RGK VLE FT LLR +IGSGLGACE+LATIRRDNPRT+ VT RIQ+I+ +LPESRDLANSMRL+ SIC++GH+LLP++QRLVAVT LVG + + +G S D EA R G+ + G + NPR LFRYELI + + PS G SR RGK S S + + P + SADGT GIRV+L+ LV + QL R +E+L + R+SS E V+FEA EG GS SRTVVRV+SRGG E G RG GAG SS+AGDLLE FVESV+L+++LC+ERH NI L+R++KGTTYKELMEVVR ETVP +VR AFA L+E HL+VAPLLP+P +RY R KD+ + C+
Sbjct: 28 PPVPYARFIRPAALAVSHFHSVLSRGAAWXXXXXXXXXXXXXXXXXXXXXRSLAGHSGGG--DAPSAGGRGLMSMGESLGKSSXXXXXXXXXXXXXXXXXAARVIVGRKRERSRHNVVGGLRGGGASGVXXXXXXXXXXXXXSSLMISLDEFHANPRLRFQLLLREQGIVVQLFEAM-----STDGILARHLWWDGDAKESASGSTSIAPPAFKSTTPRSGATRVGGTDVGGGSNTDEWEMRRDRSDARHCLRQFVVQAMALADFFARDNPRGKAVLENFTPLLRMLIGSGLGACEVLATIRRDNPRTYAVVTPARIQQILATLPESRDLANSMRLLRSICKVGHSLLPSIQRLVAVTVLVGVDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHGVSAAXXXXXXXXXXXXXXD---EASRRVGSDSREGVENHL-LRNPRSLFRYELIRDMDVTPSDVDAXXXXXXXXXXXXXXXXXGTLAGGASASRPSLTPSASESSRGKAXSNSSRVKSQRRKPSLPGASGTNFRSADGTNGIRVRLKRLVAG-VSMGEQLRRRREMLNGETRVSSGEGVIFEAVQEGSGSASRTVVRVLSRGGAGEPPVEGPWGARGSGRGAGPSSAAGDLLELFVESVRLLASLCQERHEGNIALVRSLKGTTYKELMEVVRSETVPPTVRAAFAQLLEHCHLNVAPLLPRPPVRYVRLKDDDDEXTCD 747
BLAST of mRNA_H-elongata_contig1877.5124.1 vs. uniprot
Match: A0A6H5KRP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRP3_9PHAE) HSP 1 Score: 333 bits (854), Expect = 2.770e-96 Identity = 269/673 (39.97%), Postives = 327/673 (48.59%), Query Frame = 1
Query: 307 GIPVRYSKAIQLMHEVSGALLCIDVRERAANEGFAMKVVLKTVETSSDDMVVSDDWLDTWWELRSPENVRISQ---------------LLHFDEICLHSNRWHRSLRAQPTAAARKKIGEGCVDRGTGSPPMLGINS----VVSQDDCPGEVDASFTASLLRVVPFDDYPSPPASDDIQALEFSTTMLSSA-TSFSSSLRSPMSSVGDSGRFPAAFPG-GTTD----GEMVKRG-LRGGDTVRLCHLTSSGFLTHETVPTTPPKSYGMTGGNGATE-------------------GDIAASIKKRYHDDGGHFGAFLYVSTTPQRLQKLQNASSNCLWVLERTHCALGGRPLRRTAERKAPARGAL-----------------SAGTAG-------------------------------------------FRSGAEAEYGRRHSDTCD------------------------GALAFSVDGPPSST----SIGLNMSADTVANLTRRQGAGDAVEYVRIKHLATMRYLCVGKKCDPVPVEGGEEDLDGRNENSAQGKGGKRGRGKGKRFVFP----RVGMVTVERRAALPAATVFAIRPRSTGGVVAASTGGI--------------LGSTDLVHLQHRETGFFLAAMPREIEAGDERVELTVVKSPLTSE 1872
G PVRYSKA+QL+HE SGALLCIDV++RA EGFAMKVVLK ++ S D +D + DTWWE++SP NVRISQ +LH+DEICLHSNRW RSLRA PT R+++ G G ++ + ++ PG V ASF+ SLLRVVP+DD PS P D L +TT ++ S S +P DS P A G GT D G + G +RGGD VRLCHL S+GFLT E V P+++ GG E + + + D G G FLY+S TP R QKLQNASSNCLWVLERTHCALGGRPLR + A A GA+ S T+G RSGA E R +SD+ + G+ + PSS+ G + A+ VA RRQGAGD VEYVRIKHLATMRYLCVGKKCDPV GG RVGM+TV++ AA+PAATVF IRPR T AA GG+ LG DLVHLQH+ TG FL+A+ E A R+ LT+VKSPLT+E
Sbjct: 11 GTPVRYSKAVQLVHEFSGALLCIDVQKRAEREGFAMKVVLKAIDPPSGDGGSTDGYKDTWWEVKSPGNVRISQARLASCFASSSGEGKVLHYDEICLHSNRWDRSLRAHPTLLDRQRVTTATEVEGVSGAEEPGASTGPSPTLPREKYPGAVHASFSHSLLRVVPYDDCPSLPYDDG--RLSIATTAAAAXMASASGGWPAP-----DSSSSPYALAGSGTADTPVGGVVDDAGAIRGGDVVRLCHLASTGFLTCEAVT---PEAF-PRGGWAQPETRMVDQAGXXXXXXXXXXXAGVDGPAQGQASDGGVGGGPFLYISATPHRRQKLQNASSNCLWVLERTHCALGGRPLRGSC---ASAAGAVDPPQQRQQQGENPTAWSSFSTSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGAT-ERQRWNSDSDNFPGGNDXXXXXXXXXXXXXXXXXVGSTGVASGTRPSSSFPGGGFGRDTYAEAVAKRRRRQGAGDPVEYVRIKHLATMRYLCVGKKCDPVRGGGGVNSXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAARVGMLTVDQHAAVPAATVFVIRPRRTA---AAGAGGLVGPAATEEVGADRWLGPEDLVHLQHKNTGLFLSALRLENTAKG-RIGLTMVKSPLTTE 664
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 903.7 |
| Seed ortholog evalue | 1e-259 |
| Seed eggNOG ortholog | 2880.D7FMW8 |
| Preferred name | RYR1 |
| KEGG ko | ko:K04958,ko:K04960,ko:K04961,ko:K04962,ko:K04963 |
| KEGG TC | 1.A.3.1,1.A.3.1.2,1.A.3.2 |
| KEGG Pathway | ko04020,ko04022,ko04024,ko04070,ko04114,ko04140,ko04210,ko04218,ko04260,ko04261,ko04270,ko04371,ko04540,ko04611,ko04621,ko04713,ko04720,ko04723,ko04724,ko04725,ko04726,ko04728,ko04730,ko04742,ko04745,ko04750,ko04911,ko04912,ko04915,ko04918,ko04921,ko04922,ko04924,ko04925,ko04927,ko04934,ko04970,ko04971,ko04972,ko05010,ko05016,ko05167,ko05205,ko05410,ko05412,ko05414,map04020,map04022,map04024,map04070,map04114,map04140,map04210,map04218,map04260,map04261,map04270,map04371,map04540,map04611,map04621,map04713,map04720,map04723,map04724,map04725,map04726,map04728,map04730,map04742,map04745,map04750,map04911,map04912,map04915,map04918,map04921,map04922,map04924,map04925,map04927,map04934,map04970,map04971,map04972,map05010,map05016,map05167,map05205,map05410,map05412,map05414 |
| EggNOG free text desc. | inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity |
| EggNOG OGs | KOG3533@1,KOG3533@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01009,ko04040,ko04147 |
| Hectar predicted targeting category | other localisation |
| Exons | 13 |
| Model size | 3924 |
| Cds size | 3924 |
| Stop | 1 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622930072.2006617-CDS-H-elongata_contig1877:3135..3306 | 1622930072.2006617-CDS-H-elongata_contig1877:3135..3306 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 3136..3306 - |
| 1691679270.2564886-CDS-H-elongata_contig1877:3135..3306 | 1691679270.2564886-CDS-H-elongata_contig1877:3135..3306 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 3136..3306 - |
| 1622930072.2184808-CDS-H-elongata_contig1877:3516..4398 | 1622930072.2184808-CDS-H-elongata_contig1877:3516..4398 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 3517..4398 - |
| 1691679270.2734587-CDS-H-elongata_contig1877:3516..4398 | 1691679270.2734587-CDS-H-elongata_contig1877:3516..4398 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 3517..4398 - |
| 1622930072.2335188-CDS-H-elongata_contig1877:4761..4896 | 1622930072.2335188-CDS-H-elongata_contig1877:4761..4896 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 4762..4896 - |
| 1691679270.281336-CDS-H-elongata_contig1877:4761..4896 | 1691679270.281336-CDS-H-elongata_contig1877:4761..4896 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 4762..4896 - |
| 1622930072.2498949-CDS-H-elongata_contig1877:5234..5465 | 1622930072.2498949-CDS-H-elongata_contig1877:5234..5465 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 5235..5465 - |
| 1691679270.2888155-CDS-H-elongata_contig1877:5234..5465 | 1691679270.2888155-CDS-H-elongata_contig1877:5234..5465 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 5235..5465 - |
| 1622930072.272022-CDS-H-elongata_contig1877:6132..6687 | 1622930072.272022-CDS-H-elongata_contig1877:6132..6687 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 6133..6687 - |
| 1691679270.2990808-CDS-H-elongata_contig1877:6132..6687 | 1691679270.2990808-CDS-H-elongata_contig1877:6132..6687 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 6133..6687 - |
| 1622930072.287393-CDS-H-elongata_contig1877:7524..7602 | 1622930072.287393-CDS-H-elongata_contig1877:7524..7602 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 7525..7602 - |
| 1691679270.310398-CDS-H-elongata_contig1877:7524..7602 | 1691679270.310398-CDS-H-elongata_contig1877:7524..7602 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 7525..7602 - |
| 1622930072.3034313-CDS-H-elongata_contig1877:8000..8792 | 1622930072.3034313-CDS-H-elongata_contig1877:8000..8792 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 8001..8792 - |
| 1691679270.318393-CDS-H-elongata_contig1877:8000..8792 | 1691679270.318393-CDS-H-elongata_contig1877:8000..8792 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 8001..8792 - |
| 1622930072.3179874-CDS-H-elongata_contig1877:9218..9596 | 1622930072.3179874-CDS-H-elongata_contig1877:9218..9596 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 9219..9596 - |
| 1691679270.3290691-CDS-H-elongata_contig1877:9218..9596 | 1691679270.3290691-CDS-H-elongata_contig1877:9218..9596 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 9219..9596 - |
| 1622930072.3292265-CDS-H-elongata_contig1877:10073..10250 | 1622930072.3292265-CDS-H-elongata_contig1877:10073..10250 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 10074..10250 - |
| 1691679270.340154-CDS-H-elongata_contig1877:10073..10250 | 1691679270.340154-CDS-H-elongata_contig1877:10073..10250 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 10074..10250 - |
| 1622930072.3442798-CDS-H-elongata_contig1877:11047..11124 | 1622930072.3442798-CDS-H-elongata_contig1877:11047..11124 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 11048..11124 - |
| 1691679270.3489687-CDS-H-elongata_contig1877:11047..11124 | 1691679270.3489687-CDS-H-elongata_contig1877:11047..11124 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 11048..11124 - |
| 1622930072.3597078-CDS-H-elongata_contig1877:12067..12209 | 1622930072.3597078-CDS-H-elongata_contig1877:12067..12209 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 12068..12209 - |
| 1691679270.3605297-CDS-H-elongata_contig1877:12067..12209 | 1691679270.3605297-CDS-H-elongata_contig1877:12067..12209 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 12068..12209 - |
| 1622930072.3765776-CDS-H-elongata_contig1877:12724..12927 | 1622930072.3765776-CDS-H-elongata_contig1877:12724..12927 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 12725..12927 - |
| 1691679270.3710632-CDS-H-elongata_contig1877:12724..12927 | 1691679270.3710632-CDS-H-elongata_contig1877:12724..12927 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 12725..12927 - |
| 1622930072.3919678-CDS-H-elongata_contig1877:14618..14721 | 1622930072.3919678-CDS-H-elongata_contig1877:14618..14721 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 14619..14721 - |
| 1691679270.380504-CDS-H-elongata_contig1877:14618..14721 | 1691679270.380504-CDS-H-elongata_contig1877:14618..14721 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig1877 14619..14721 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1877.5124.1 >prot_H-elongata_contig1877.5124.1 ID=prot_H-elongata_contig1877.5124.1|Name=mRNA_H-elongata_contig1877.5124.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1308bp
MLRVGERVLLLALRDDPNKNPLGYLSSRLLTDVEGKSSLVTLDCTLSPFR DVPPGEKSFEPVAVSNCIFRVEACMDRHDASRANATQRRVDAGIATHTGI QPGIPVRYSKAIQLMHEVSGALLCIDVRERAANEGFAMKVVLKTVETSSD DMVVSDDWLDTWWELRSPENVRISQLLHFDEICLHSNRWHRSLRAQPTAA ARKKIGEGCVDRGTGSPPMLGINSVVSQDDCPGEVDASFTASLLRVVPFD DYPSPPASDDIQALEFSTTMLSSATSFSSSLRSPMSSVGDSGRFPAAFPG GTTDGEMVKRGLRGGDTVRLCHLTSSGFLTHETVPTTPPKSYGMTGGNGA TEGDIAASIKKRYHDDGGHFGAFLYVSTTPQRLQKLQNASSNCLWVLERT HCALGGRPLRRTAERKAPARGALSAGTAGFRSGAEAEYGRRHSDTCDGAL AFSVDGPPSSTSIGLNMSADTVANLTRRQGAGDAVEYVRIKHLATMRYLC VGKKCDPVPVEGGEEDLDGRNENSAQGKGGKRGRGKGKRFVFPRVGMVTV ERRAALPAATVFAIRPRSTGGVVAASTGGILGSTDLVHLQHRETGFFLAA MPREIEAGDERVELTVVKSPLTSEYWRITRASEREKNATNHILRALAQLK AALKPLLDEVDRLPLYIGERSISHCPPPVPSARVLRPATIAVAHFHSVIA RGVGWWLKREPKGADRAMSGATRASVQEGPRIAGQKLKGLGERTGRGAAV WALARSTSSDMAEDSGLIRKKDRARGSLNSGKYSGVWSVVSAGVTGGSSA DSTSLDEFYGNPKLGFQLLLREQGVIVALFNAMEKIFRARDNLLMNTLWW EDTEIVSVSTQHTSLGDTSEAEGAANGENGVENAEARLILRRLVREAMAL ADFFAKDHVRGKMVLEPFTLLLREMIGSGLGACELLATIRRDNPRTHLNV TAKRIQEIVGSLPESRDLANSMRLMASICRIGHALLPTVQRLVAVTALVG DNASASFDHAGSIFGSADVNTTSTTTISVSGSSIAHGGDGIVNGDSDGSE EVQKDEMDDEVLDREREARMRAGTGAGVGERRSVTFNNPRGLFRYELISN AEPSGRRVGSRRRGKGHSFSYERNQAPWWSADGTRGIRVKLEGLVKNPLP TRGQLPRLKELLAQRRMSSNEVVVFEAWLEGGGSSRTVVRVVSRGGLEEF SGGRGGAGASSSAGDLLEYFVESVKLMSTLCRERHAENIVLLRAMKGTTY KELMEVVRCETVPISVRGAFALLVERMHLDVAPLLPQPAIRYDRKDEQFD VRCNTSV* back to topmRNA from alignment at H-elongata_contig1877:3136..14721- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig1877.5124.1 ID=mRNA_H-elongata_contig1877.5124.1|Name=mRNA_H-elongata_contig1877.5124.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=11586bp|location=Sequence derived from alignment at H-elongata_contig1877:3136..14721- (Himanthalia elongata Himel1 dioecious) ATGCTTCGTGTTGGCGAGCGTGTTCTACTGCTGGCACTCAGGGACGACCC
GAACAAGAACCCCCTGGGGTACCTGTCCTCGAGGTTGCTGACGGATGTCG
AAGGTGTGTGGCTTGTCTCGTTGGGTTTTTCACGTGGTTGTATGCTTTGC
CGCCGTGCTGGTCCTTTAGTACAAGTCAGGATAGAATTGAATGTGCCGGG
GCGTGGCCAGGCAGGGCCCTGCTTCTGGTGATGATATCGACCTTCTTGCA
TCCGAGCTATCCGTCGTCCCACTTGGAACTTCGAGTGGTTGGGCGGAAGA
CAGATGTTGTGGTCCTAGTGCTGATTGATTCCTCATCTCTCTCTCTCTCT
CTCTCTCTCTGTGTGTGTATATTCATTAAATTGCACATAAGTGTGTGTCA
ATATGTCAAGCTTTCGAATATGCTGTCGATTATACTGTATTCGTAGGCCT
GTACCAATTCAGGAGATTAGTAAGACGCATGATCAGAGACCGAAGGCTAG
CCAGACACGTGATTTCCCTTTCCTATGAATGTACGTACGTGTGTCCTACC
GGTAACCCCGATGGTTGCAAGCCCGCTAGGTACTGCTGCGCATATCCTTC
GAATACATTGATGTCATGGGGTATGCCGACTTCAAAACGATTGATATTTT
TCTCTCGGTGGTTTCTTGACCGGAACATAACCTGCTTCCGTGGCGAAACG
TCTTCCGTCTCCCATGTCCTTCAAATATGTATCTGATCGATTATGCGCTC
GTGGACCGTTACCTTGTTGAAACCCGGTGGGGAAGCATCGTGGGCAATGC
TCACCTGCCCCGTTATAATGGGTTTCTTGCGAACGATTGACCTCCACCCG
GGCTTGGCTGCAGAAAATCTTAGAGAAACCCCTGTTCTTAAAGCTATAAG
ATGGAGCAAGCGTTGGGTACATGAGGGCAAGAAATTGCTCGGTTGGTCCC
AAGAAAATTCTCCAAAACACTGACCTCCCTTCTCGTCCAGGCCTTCCTTG
CACTGGCCCGAGGGTGAGGGGGGCGGGGGGGCTCGCATCATCAAGTTTGA
CTGGGTCAATTTGACTTCTAGCATAAAAACGCCACATGGGGTATACGTAG
TTTGTTCAAGCCGTTCCCCTGATACTCCTCACAACGAAGAGTGTATATAT
AGTAAGTGCTACTCTGATGGTTGATCTCCAAACTGTAACTAGTTGGCTTT
GTTTTGGGAGCCTCGGGAAGCTAGAGACAATGCGCGTGTGACTCTTCGTT
CGCACCGAGACGAGGGCGATTACCGTAGCTACACACAGGGCCGTAGGCGC
AACATCGTAGTGATGGACCGATGGACCCAATGGCCTGCCGGAATCGCGAG
CGAGACTCACCAATTCTTGACACCAAAACTCGCGTCGACCGTACCCCTCC
TTCTTAAAAACCGACCTTTGATCAAAACGCCCTGTAAATCCGTCCATAAC
CCGGTGCGCAAAGAGTTGTACCCAAAATGCGAACCTCGTGAGGCTCTCGT
CATTTCTCCCAGCGGAGTAATGCTTGTGAGGCAATAAACCCAGCCATTGT
CTGTCTTCTGTACCACACGACGTTGTGTGATTCGGTCGCGTGTGAAGTTT
TCGAACGAGCTTCATTGACAGCGTAGCGTTTCAGGCTTCCGTAAGACCAG
CATGATGTGCGTTTTGATTTCAATTTTCACGGATGTACGGCAGTCGACTT
CTGGTTGGCGCTGGGGCTGCGCGTGGCCCAATCGGCGATGATCTGATGCC
GCCGCCTCCCCTTTCATGTCGTCCGGGAATCCGAGGGCCTCCAGGCAAAT
CATCGTTAGTGACCCTGGATTGCACGCTGTCTCCATTCCGAGATGTTCCA
CCCGGGGAGAAGTCTTTTGAGCCCGTGGCGGTGTCGAACTGCATTTTTCG
CGTGGAGGCGTGCATGGACCGACACGACGCAAGCCGGGCGAACGCCACGC
AACGCCGGGTAGACGCCGGGATCGCGACTCACACAGGGATACAGCCGGTA
AGCGTCCCGTGCAGGTTAAGTACCTGCCTTGCCTTCTTCGGTCACTAAAA
TGGTGTAAAGTGGCGATATGCTGACACTGGAGTCGAGTCCACGAAGCGGT
GGCAACTCGTGCTTATGGGTCTCTACGACCCCCAAACGTCGCGAGTCCGA
CGCGCCAAGTGGGCACATGTTGGCGTTAAGGAACGACTCCGGGTGGTTCC
ATGACCACTGTCGTTCGCCTAACGGCTCAAACGAGAATATGACTGGCGAC
TGGAGTGTTCTTGTAAATGGTATTGGAGAGCCTGGCCCTGTCGCAATCGT
TGAACGCACGCCTATGACTGCAGCGCAAAGGCAATCTTGGGAGAAGAGCT
GAGCTCCTGAAATATTGTCTCTAAAACAAGCTGATCGCACGCAGCCTCGT
TTCATCAAGGGAAAGTAAAATGTTTCGATTGCATGGGCGGCTTGAAAAGA
CCACAGCGTTGCTTTCATTCCCTAAACCACCCTTGATCCCGATTGAAACG
TCGTTCCTGTAGGGCATCCCCGTGAGATACTCGAAAGCAATCCAGCTGAT
GCACGAGGTCAGCGGCGCGTTGCTGTGCATCGACGTGCGGGAGCGGGCGG
CGAACGAGGGTTTCGCGATGAAGGTTGTTCTCAAGACCGTGGAGACTTCG
TCAGGTACAGTAAGCATTCCGGCTAAGAGTCGGGTTAAATGCAGCAAAAA
ACAAAATGGAAATTTCTTAAGAGGCGTATGTTCCAAACTCTGGACACGAA
CCGAGATCGTTCGTTCCCCAAAGGCTGGAAGCTTAAAACTTTGGAAATAA
CGCCTTGTGGAAACCCCTTCTTGGGGAAGTGTATGGCAGAAGCATCAGTA
CCATGGCACCTACAACAAACCACCCCGCAACCTGAAAGTCAGCACAGGCT
CTGACAGACGCCTGTTGACGCCTACTGCTGCGACGATCGAAGCGCTCCTC
GTGTCAATGCATGGTCGACGTATTTTTGTTAGTTTTTTTTTTGCGGCCAC
GTTCCCTGGTAGCGAACACGTCGCCTACATCAAGCGCTCGAACCATTCCG
CGTTTTTTTTGTGATTCTTCTCCACGTTGATGGGCAATGTATAAGTCACA
GTCTGCCTCATTGTCTGAAACTTGTCCCACCCGTTTTCAGAGCCCGCCTG
CGGCTCCACAGTCAAAGCTGTTTGATGTCGCGTTGACTTGGCTCGTTTAA
GCAAGGAACTCGCGCTCTTTTTTCCAATTGGCCTAAACACGATTGAACAA
GACTGATCTACAAAAGTTAGAACAGTTTCCAATACATTCGTTTCCACGCC
TTTGGAGAAAAATAAAATAAAATAAAAGTGTGTGGTTGAAGCCCCCCACA
CAAAAAAATGGCGTTCGCGAGGCCGTGAGAGATTATACACCCTCCGCCAC
TTGATGACGATCGACCTCTTTCGGGAATGTCCTGCTATTTAACAATATTT
CGGCGCGAGTCGTGCGCAAAGACGGGAATGTTCCACAACGCTGTTAAGAT
GCTTGCGTGTGCGCCGCCTCTCTTCGCACTTGCGGCTTCGGTGTCCTCGT
GCTGGTACTGGTGCTGATGCTCGATCCGTCTAATTCGTCTGGAGCAGATG
ACATGGTTGTGAGCGACGATTGGTTAGACACGTGGTGGGAGCTGCGATCG
CCGGAAAACGTCCGGATCAGCCAGGTGAAAGCCTCTACATACCACAAGCT
GTACCTTCAGTATGCGGAAAGGATATACCGTATATATATATATATATATA
TATTGGTTTATTTCAATGCCATCCAACGGAGAGCACGCCACAGTTAGGAT
TAGGGCTAGGGCTAAGGCTCAACCCCATGTGTCGAAGTACGTTTCCCATG
TCCGACCTATTATTTTTGCTTTTTCGCTGTTAGCAATAAATCAATCCGTA
ATTTCAACCCGTCCAAGGAAAAAATTACTGCCGAGTTTAAGCGTTCGTTC
GTGTGTGTATGTGTATGTGTGTGTATGTGTGTGTGTGTGTGTATGTTTTT
TTTTTTTAAAGGCGGCATATAGGGGGGGGGGTTAAACCCTAGTCATATCT
CTAGACTTCTCGACTCTGGCCTATTTTTTTTCCTCACTGTCAGCGTTTTG
GGATCCCACCTAAAAAGGTAGCCACTGTACACGGTGGCTGATCTCGCCTA
AGGAAGAGTAATGGGGCGACCAGGGATAGGCGAATAGAGAAGTTTAAAAG
GAAAGATAATTGAGGTTAAATATATGTCTGCACACTGTAGTCTATATAAA
AGGTTACCAGCAGCGGTGCTGAAACGGAGGAAGAAAAAATAAAAATAAAT
AAAAATTGGCAAGTTTCGACGCGGGGGAGACTCTGCTCCTTAAAAACATC
GCTGCTATTTTTTTTTTATTCTTTTCGTAGATCGTGCACGCCTAGCGCAT
TGCCGCTGCGTCCCGTTCCCAGAAACGTGCTGGCCGTGCCGCTTGTGCTT
TGTGTCCCCTGCGAACAGGAGCTTTTACATTTCGACGAGATCTGTCTGCA
CTCGAATCGTTGGCATAGAAGCCTGCGAGCGCAGCCCACTGCAGCAGCCC
GCAAAAAGATTGGCGAAGGATGTGTCGATCGTGGGACGGGATCTCCCCCG
ATGCTTGGCATCAATTCTGTGGTTTCACAGGACGACTGCCCTGGAGAGGT
GACTCGACTGTTGGTAATTCAGGAGATGGCCCGGGTGATAGGGTTGCACG
AGCGTCGGTCTGAGCTGGACGGTCTTGTTTAGAGAAAGTAAAAAATGCTG
CGTTGCAGCGCAGAATACGTAAAGCACTTGAAGTCAATGCAGATCTGGTG
CATTTCTACCGCGGCATTCCCGCGGCTCCCTTCCTTCAAGGCATTGGCGT
GTTCGAGGTACACGACTGGACGGTGTTTTCCACTGCGTTCGGTGTGCACG
GTGAATGCGCGCGCGCGCGACGTGAGATTATCTCTAGCACTCCCCGATGA
TTTTAGCGAAACATAAGTGGACCGAGAAAACGACGCCCATCTTAACCGCT
GACGCTAAAGTGGCATAATATATACCTAGACATATACCACGCTGCTGAGC
TTTTGCTAAGTGTCTCCCCTTTCTCCTTGTCCCTCCTCCTCTTCCAAACC
CCCGCGCCCCGCAAACACAAAAAAGGTCGACGCTTCGTTCACGGCCTCTC
TCCTCCGAGTGGTTCCCTTCGACGACTATCCGTCGCCGCCGGCGTCCGAT
GACATCCAGGCGTTAGAATTCTCGACGACGATGCTGTCTTCGGCGACATC
ATTTTCGTCGTCTTTAAGGTCGCCCATGTCATCTGTGGGCGACTCTGGGC
GCTTCCCTGCTGCGTTTCCTGGAGGCACGACGGACGGCGAAATGGTTAAA
AGAGGTCTCCGCGGAGGCGACACCGTTCGTCTCTGCCACCTGACGTCCTC
CGGGTTTCTCACCCACGAGACGGTGCCGACGACGCCGCCGAAGTCGTACG
GCATGACGGGTGGGAACGGTGCGACCGAAGGAGACATCGCGGCGAGCATA
AAGGTCAGTGTGTTTTGGTCGTCTTTTGCTATGTATGAGGAGCGGCTTTT
GGTGACGGAGGGCTGAAAGCAAGGAGAAAACGCGAGAGCATAATATTTTG
CAACTTCGTCTAGCATCCAAATTGATGCGGCCGGAGGGCGGTACATTTAG
CGTGCAGTCACTTGGCGTCTTGTAGCGTTAGCGATTATGTGTGACGTGGG
GCAGAGGCGATCAGATATTTCACCTTGAGTCGCACACGTCCGAGGTTCTA
CGTTAGACGTGTTACGTCACCGATTTTCCAAGATACCAAGGGCATTTTTC
CGTCGGGGATGCGTAAAACAGCTCTTTCTCGCCTCCGACGGGACGGGATC
GGAGGCCACGCCGGTGATTTCTTCTCCTCTTTCTCTTATCCTCTTCCCTC
GCTCATCCACGTTATGACTTGGCGATCAGAAACGCTATCACGATGACGGC
GGCCACTTCGGAGCCTTTCTGTACGTCTCGACCACCCCCCAACGCCTGCA
GAAGCTGCAGAACGCTAGCAGCAACTGCCTGTGGGTACTAGAGCGCACCC
ACTGCGCCCTGGGTGGACGCCCGCTGCGCCGAACCGCGGAACGAAAGGCT
CCAGCACGTGGTGCATTGTCGGCAGGAACAGCCGGCTTCAGATCTGGCGC
CGAAGCCGAGTATGGGCGACGGCACAGCGATACCTGCGATGGCGCTCTCG
CTTTCTCCGTTGATGGTCCGCCCTCCTCCACCAGCATCGGGCTTAACATG
AGTGCCGATACCGTCGCAAACCTCACGAGGCGGCAAGGGGCCGGGGACGC
GGTCGAGTACGTCCGTATTAAGCACCTCGCCACGATGCGGTACCTGTGCG
TCGGGAAAAAATGTGATCCGGTTCCGGTCGAAGGAGGCGAAGAGGACCTC
GATGGCCGCAACGAAAACTCGGCCCAGGGGAAGGGGGGAAAGAGGGGAAG
GGGAAAGGGGAAAAGGTTCGTTTTCCCACGAGTCGGCATGGTTACGGTTG
AACGACGGGCTGCCCTGCCTGCGGCGACGGTATTCGCGATTCGGCCGCGC
TCGACCGGGGGCGTGGTGGCGGCCTCGACGGGTGGGATACTTGGATCAAC
GGACCTGGTGCACTTGCAACACCGGGAAACAGGTTTTTTCTTGGCGGCAA
TGCCTCGGGAGATCGAGGCGGGGGACGAGAGGGTCGAGCTCACTGTCGTC
AAGTCCCCTTTGACGAGCGAGGTAAGTCCGGAGGCGTTTCGAGAGTACGC
TGCGATGTAAATAAGAGGGTCGACGAAAGAAGAGGAGGCGGGGGGGGGGG
TTCGCTACGACTGTTTTGCTTCGTCGCGGATACTCGCTCTATTTTCCTGT
AAACATACTTGTCTCCCCGGGTAGGTCAACGCCTTCAACGGACAGAACAG
GAGGCAGGCGCGTGGGCAACTTGCGGGCGCCCTCGAATCCCTCGGGACTA
GAACTCTCGAAGCATTTTTGTTTTAGAGAAATGTCGACTTGCAGAAAAGT
GTAAGATTATGATCGTCGCGACTAATGCCTAATCATCTTTGGAACGTTTG
CCTGGAAATACGAAAATGATTTCCCTGTGTAACAATCGTCACCACCTTTT
CCCTCCGTGGAACTCCCAGTACTGGAGAATCACTCGGGCATCGGAGCGCG
AGAAAAATGCAACGAATCATATCCTTAGGGCGCTGGCGCAGCTCAAGGTG
AAGCAGCAGTCGTGCAGCCCGGCCCTTACTCTGAAGCGTTTCTCGCGAAG
GAACGCACTCCCCATTGAAATTAGTGTTGGGAGCCAGTTCTTCACGCGCG
CTCAGCGTTTGGGCGGGGGCTTGAAATGTCCCCTTCACTCACCTTGTGGG
TGTGTCGAGGGAGAAAATCACACCTCTGTGCGGCGTCTAGAATCTGTCCC
CCGTCGAGTCCTACCGCGAAAGAGAGAGAGAGGGCGGGGGAAGAGGAGGG
TGTTACAAACCTGTCCCAGAAATTGGCGAAGGGGGGAGCTATCAAAATAG
CCCCTTCCCGGAAATATTTAATTTCAGACATCCCTTCGTGGAAAGAACTG
TGTTCGGGGAATATTACTATCGGTTAAGGGGGCTGATAGCTCCATACCTA
GGAGGAGCTACGTTGAATGTGCGTGTGATCATGATGTCATCATATACTAT
ATATACAGTATGGTATGGATCAATCAACCGGATATGGTTGACAATCCTGC
TGGTGGTCAGCTGAACAGGGAAAATGAATTTCCCCTATTCCCGTTTGCGC
CTGAGAATTCGGTCTTTCGAGACAAGTTCGGCAATCCCATCCCGCGTTAG
CCCGCTCATTTTCCCAACTCAGGCTGAATCTGGCGCTGCCCCCATCTAAA
CACGGGAGCAGACATGTAGCACCCCGTCCCCCATCCCTCCCTCCTTCTCC
TTTTGATGAATTATTATCCTGTCATTTGTGTCGTAAATTTCCCGCTCTCC
CTCCTTCTGTCCTTGCTCAATCATCCCCTGTCTCCCTTCCCCCCCCCTCC
CCCTCCGCTCCCCTCCCCCCTTTGAATCTCTCAGGCCGCGTTGAAACCCC
TCTTGGATGAGGTGGACAGGCTTCCGCTATATATCGGCGAGCGTTCCATT
TCGCATTGCCCGCCTCCCGTGCCATCGGCGCGCGTCTTGCGGCCGGCGAC
CATCGCCGTCGCGCACTTCCACTCCGTCATCGCGCGTGGAGTTGGTTGGT
GGTTGAAGAGGGAACCGAAAGGCGCAGATCGTGCAATGTCGGGGGCGACG
AGGGCCAGTGTACAGGAGGGTCCGAGGATCGCGGGGCAGAAGTTAAAGGG
CCTCGGCGAACGCACGGGGCGGGGGGCGGCGGTCTGGGCGCTCGCGCGAA
GCACCAGTTCTGACATGGCGGAGGACTCGGGTTTGATCAGGAAAAAAGAC
CGGGCAAGAGGAAGTTTGAATAGTGGGAAATATAGTGGTGTTTGGTCCGT
GGTATCGGCGGGGGTGACCGGAGGCTCTTCTGCAGACTCGACCTCCCTTG
ACGAGTTTTATGGGAACCCGAAGCTAGGGTTTCAGCTACTGCTGAGAGAG
CAGGGCGTTATTGTGGCGCTGTTCAATGCCATGGAGAAGGTGCGTTAGGG
CTTGGGCGTTGCGCTACGCTGCGCGTATCCACGGTGTGGGCGCGACGTGT
CTCACGGCTGTGCTCTTTGAGGCCGACGAAGACTGCTTTGTGTCGTGGTG
ATAGGGGGTGGGGAAGGGGAGATCGGGAAAGAGGGTAGGGGTTATTGTGA
CATTGCTCTCGTCCCAACGAAGTCTCTCCACAAGGTCGAGATGAAACAAT
CGGCAGTGTATTGTTTTGTGTGCGAGGGAGAGTCGAGGTTCGTAGTGAAA
CGCGGTAAATGATTTAACGACTTGGAAATGGGGGAGGATTGACGGATCTG
TCCCCAAGTTTAATGAGGAGGCGATGTAAAGGAGCCCGTCCTCCCGGTGA
TAATTTTTACAAAACACTTAATGGAATGAACTGTGTTCGATGCATGAGAG
CGCGTCAGGTACAATGATGGTTATAGCCGCTTCCTCGCAAGATCCTGCTT
TAGCACCGCCCCCCGCTGAACGCAGATACATTCCTCCGATCCCGACTCCC
GTGAACGTTAATCACTCGAATTTAGACTTATTACCACATAGGTCGTATGC
CTTGCAGCGGTTGGCGCGATGGTTATGCCTCGAAATGTTACCAGTTGTTG
CGTTTTGCGCGATCGTGCCTATATCGTCGTATCTTGCGCGCGCCGCCGCC
GAGAAGATATTTCGCGCGCGAGACAACCTGCTCATGAACACCCTTTGGTG
GGAGGATACCGAGATTGTCAGCGTTTCGACCCAACACACGTCGTTGGGGG
ATACAAGCGAGGCGGAAGGGGCGGCTAACGGGGAGAATGGCGTGGAAAAC
GCGGAAGCGCGATTGATCCTTCGCCGCCTTGTTCGCGAGGCAATGGCGCT
CGCTGATTTTTTCGCGAAAGACCACGTTCGGGGGAAGGTGTGAAACTATG
TGGAAGAAACCTGTGACGAGTACGACGCGTCACGCGCGCTTGCTATCGTG
TACATGCGTAACGATACCGCAATCCTGTATCGTCGTTTTTTTTTGGTCTG
GGATAACGTGGGTTCGCGCTATCTTTGATCGTGACGCAATAGCGCGGAGA
GAGCATATATTTTTCTGTCTATAAAGCAGGGATATCTTGCTTCGCCGACC
CTAAAAACATTAGATTTTGCTGAATGCGCCCGTTTCCGCCTCAACTGTAC
CGTAGTATTTTTTCTTGCGCGCGGCGATGGATGGGGTGTTGGGGGTGAAT
CGCTGTTTCCACGACGAATTCGCAGATGGTATTGGAACCCTTCACCCTCT
TGCTTCGAGAGATGATTGGTAGCGGCCTGGGCGCGTGCGAGCTCCTAGCA
ACAATTCGGCGAGATAATCCGCGAACGCACCTAAACGTCACCGCAAAGCG
CATACAGGAGGTAAGGGAATATAAACGGGTCACTTTCCATGGTAATGTGC
ACGCGCGACATGGCATGAACGTGCTGATCTTCTTGCTGTAGGTTGGGTTT
GTCGGTGACTCGCAATAAGCGGACGCTTTTGGTTTGAAGAGAGTAACTTT
ATCGGTTACCGTGCGAACTTGAGTAGGAGGCTTCGTTTATATTTCGTTGA
TGCTCACTAATTGCACCTCATGCCGCCGACTCATTTGCTGTGCTCGTGAG
TTACCCCCTAAATATCGAACGTGAGATTGATCCGTCTCTCCCTTCCATAT
CTCATCTTCCCCTGTATATTCGTTGCGCGCGCGTGTGTGCTCTGTCGGCC
GGGTCCGTCGGATCGCGGACCAGATCGTGGGATCACTGCCGGAGTCTCGT
GATCTCGCCAACAGCATGCGCCTGATGGCGAGCATCTGTCGGATCGGCCA
CGCCCTCCTCCCGACGGTTCAGCGACTCGTGGCCGTGACGGCGCTCGTCG
GCGACAACGCCTCCGCGTCATTCGACCACGCGGGTAGCATCTTCGGCAGC
GCCGATGTCAATACAACGAGCACCACGACCATAAGCGTGAGCGGAAGCAG
CATTGCCCATGGTGGCGACGGTATCGTTAACGGCGACAGCGACGGTAGTG
AGGAAGTTCAGAAAGATGAGATGGACGACGAGGTTCTCGACCGAGAACGG
GAAGCTCGAATGAGAGCGGGGACCGGAGCCGGAGTCGGCGAGAGAAGAAG
CGTCACTTTCAACAACCCGCGAGGTCTCTTTCGTTATGAGCTCATATCGA
ACGCCGAACCAAGCGGGAGACGCGTCGGTTCCAGAAGAAGGGGTAAAGGC
CATTCCTTTTCGTACGAGAGGAACCAGGCTCCGTGGTGGTCGGCCGACGG
TACTCGAGGTATTCGAGTTAAACTAGAAGGGCTCGTCAAGAATCCCCTTC
CTACGAGAGGACAACTGCCCCGGCTGAAAGAGCTCCTCGCGCAGAGGCGT
ATGTCTTCCAACGAAGTGGTGGTGTTTGAGGCGTGGCTCGAGGGGGGGGG
GTCTTCGAGGACGGTCGTTCGAGTCGTGAGCAGGGGTGGGCTAGAAGAGT
TTTCGGGGGGACGCGGAGGCGCGGGGGCTAGCTCGTCGGCGGGAGATCTT
TTGGAATACTTTGTCGAGTCGGTGAAGCTGATGTCAACTCTGTGCCGGGA
GCGCCACGCTGAGAACATCGTTCTCCTCCGCGCGATGAAAGGCACCACTT
ACAAGGTCCGAAGGTTAAGCTCGGACCAAGAGCGGATCCGACAGCAGAAA
CCGTGCACGGTTCAAGATTTAGCTGGCAAGGGCCTTGTGTGACCGCACGA
CACGTTACTGAATTTTGTGTCGTGTCTTCTGGCAACGACCTGATCCTTCG
CCGACAACATCCCCCCTTGTAAGCATATCCGCGCCTTTCCCGTTCCATTT
TGGCCCACCCATCAGGAGCTTATGGAGGTCGTGCGCTGCGAGACGGTCCC
CATCTCCGTGCGTGGTGCGTTTGCCCTGCTTGTCGAGCGCATGCACCTCG
ACGTGGCTCCTCTGCTGCCGCAACCTGCAATTAGGTATGATCGTAAAGAT
GAACAGTTTGATGTTCGGTGTAATACATCGGTGTAA back to topCoding sequence (CDS) from alignment at H-elongata_contig1877:3136..14721- >mRNA_H-elongata_contig1877.5124.1 ID=mRNA_H-elongata_contig1877.5124.1|Name=mRNA_H-elongata_contig1877.5124.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=7848bp|location=Sequence derived from alignment at H-elongata_contig1877:3136..14721- (Himanthalia elongata Himel1 dioecious) ATGCTTCGTGTTGGCGAGCGTGTTCTACTGCTGGCACTCAGGGACGACCC GAACAAGAACCCCCTGGGGTACCTGTCCTCGAGGTTGCTGACGGATGTCG AAGATGCTTCGTGTTGGCGAGCGTGTTCTACTGCTGGCACTCAGGGACGA CCCGAACAAGAACCCCCTGGGGTACCTGTCCTCGAGGTTGCTGACGGATG TCGAAGGCAAATCATCGTTAGTGACCCTGGATTGCACGCTGTCTCCATTC CGAGATGTTCCACCCGGGGAGAAGTCTTTTGAGCCCGTGGCGGTGTCGAA CTGCATTTTTCGCGTGGAGGCGTGCATGGACCGACACGACGCAAGCCGGG CGAACGCCACGCAACGCCGGGTAGACGCCGGGATCGCGACTCACACAGGG ATACAGCCGGCAAATCATCGTTAGTGACCCTGGATTGCACGCTGTCTCCA TTCCGAGATGTTCCACCCGGGGAGAAGTCTTTTGAGCCCGTGGCGGTGTC GAACTGCATTTTTCGCGTGGAGGCGTGCATGGACCGACACGACGCAAGCC GGGCGAACGCCACGCAACGCCGGGTAGACGCCGGGATCGCGACTCACACA GGGATACAGCCGGGCATCCCCGTGAGATACTCGAAAGCAATCCAGCTGAT GCACGAGGTCAGCGGCGCGTTGCTGTGCATCGACGTGCGGGAGCGGGCGG CGAACGAGGGTTTCGCGATGAAGGTTGTTCTCAAGACCGTGGAGACTTCG TCAGGGCATCCCCGTGAGATACTCGAAAGCAATCCAGCTGATGCACGAGG TCAGCGGCGCGTTGCTGTGCATCGACGTGCGGGAGCGGGCGGCGAACGAG GGTTTCGCGATGAAGGTTGTTCTCAAGACCGTGGAGACTTCGTCAGATGA CATGGTTGTGAGCGACGATTGGTTAGACACGTGGTGGGAGCTGCGATCGC CGGAAAACGTCCGGATCAGCCAGATGACATGGTTGTGAGCGACGATTGGT TAGACACGTGGTGGGAGCTGCGATCGCCGGAAAACGTCCGGATCAGCCAG CTTTTACATTTCGACGAGATCTGTCTGCACTCGAATCGTTGGCATAGAAG CCTGCGAGCGCAGCCCACTGCAGCAGCCCGCAAAAAGATTGGCGAAGGAT GTGTCGATCGTGGGACGGGATCTCCCCCGATGCTTGGCATCAATTCTGTG GTTTCACAGGACGACTGCCCTGGAGAGCTTTTACATTTCGACGAGATCTG TCTGCACTCGAATCGTTGGCATAGAAGCCTGCGAGCGCAGCCCACTGCAG CAGCCCGCAAAAAGATTGGCGAAGGATGTGTCGATCGTGGGACGGGATCT CCCCCGATGCTTGGCATCAATTCTGTGGTTTCACAGGACGACTGCCCTGG AGAGGTCGACGCTTCGTTCACGGCCTCTCTCCTCCGAGTGGTTCCCTTCG ACGACTATCCGTCGCCGCCGGCGTCCGATGACATCCAGGCGTTAGAATTC TCGACGACGATGCTGTCTTCGGCGACATCATTTTCGTCGTCTTTAAGGTC GCCCATGTCATCTGTGGGCGACTCTGGGCGCTTCCCTGCTGCGTTTCCTG GAGGCACGACGGACGGCGAAATGGTTAAAAGAGGTCTCCGCGGAGGCGAC ACCGTTCGTCTCTGCCACCTGACGTCCTCCGGGTTTCTCACCCACGAGAC GGTGCCGACGACGCCGCCGAAGTCGTACGGCATGACGGGTGGGAACGGTG CGACCGAAGGAGACATCGCGGCGAGCATAAAGGTCGACGCTTCGTTCACG GCCTCTCTCCTCCGAGTGGTTCCCTTCGACGACTATCCGTCGCCGCCGGC GTCCGATGACATCCAGGCGTTAGAATTCTCGACGACGATGCTGTCTTCGG CGACATCATTTTCGTCGTCTTTAAGGTCGCCCATGTCATCTGTGGGCGAC TCTGGGCGCTTCCCTGCTGCGTTTCCTGGAGGCACGACGGACGGCGAAAT GGTTAAAAGAGGTCTCCGCGGAGGCGACACCGTTCGTCTCTGCCACCTGA CGTCCTCCGGGTTTCTCACCCACGAGACGGTGCCGACGACGCCGCCGAAG TCGTACGGCATGACGGGTGGGAACGGTGCGACCGAAGGAGACATCGCGGC GAGCATAAAGAAACGCTATCACGATGACGGCGGCCACTTCGGAGCCTTTC TGTACGTCTCGACCACCCCCCAACGCCTGCAGAAGCTGCAGAACGCTAGC AGCAACTGCCTGTGGGTACTAGAGCGCACCCACTGCGCCCTGGGTGGACG CCCGCTGCGCCGAACCGCGGAACGAAAGGCTCCAGCACGTGGTGCATTGT CGGCAGGAACAGCCGGCTTCAGATCTGGCGCCGAAGCCGAGTATGGGCGA CGGCACAGCGATACCTGCGATGGCGCTCTCGCTTTCTCCGTTGATGGTCC GCCCTCCTCCACCAGCATCGGGCTTAACATGAGTGCCGATACCGTCGCAA ACCTCACGAGGCGGCAAGGGGCCGGGGACGCGGTCGAGTACGTCCGTATT AAGCACCTCGCCACGATGCGGTACCTGTGCGTCGGGAAAAAATGTGATCC GGTTCCGGTCGAAGGAGGCGAAGAGGACCTCGATGGCCGCAACGAAAACT CGGCCCAGGGGAAGGGGGGAAAGAGGGGAAGGGGAAAGGGGAAAAGGTTC GTTTTCCCACGAGTCGGCATGGTTACGGTTGAACGACGGGCTGCCCTGCC TGCGGCGACGGTATTCGCGATTCGGCCGCGCTCGACCGGGGGCGTGGTGG CGGCCTCGACGGGTGGGATACTTGGATCAACGGACCTGGTGCACTTGCAA CACCGGGAAACAGGTTTTTTCTTGGCGGCAATGCCTCGGGAGATCGAGGC GGGGGACGAGAGGGTCGAGCTCACTGTCGTCAAGTCCCCTTTGACGAGCG AGAAACGCTATCACGATGACGGCGGCCACTTCGGAGCCTTTCTGTACGTC TCGACCACCCCCCAACGCCTGCAGAAGCTGCAGAACGCTAGCAGCAACTG CCTGTGGGTACTAGAGCGCACCCACTGCGCCCTGGGTGGACGCCCGCTGC GCCGAACCGCGGAACGAAAGGCTCCAGCACGTGGTGCATTGTCGGCAGGA ACAGCCGGCTTCAGATCTGGCGCCGAAGCCGAGTATGGGCGACGGCACAG CGATACCTGCGATGGCGCTCTCGCTTTCTCCGTTGATGGTCCGCCCTCCT CCACCAGCATCGGGCTTAACATGAGTGCCGATACCGTCGCAAACCTCACG AGGCGGCAAGGGGCCGGGGACGCGGTCGAGTACGTCCGTATTAAGCACCT CGCCACGATGCGGTACCTGTGCGTCGGGAAAAAATGTGATCCGGTTCCGG TCGAAGGAGGCGAAGAGGACCTCGATGGCCGCAACGAAAACTCGGCCCAG GGGAAGGGGGGAAAGAGGGGAAGGGGAAAGGGGAAAAGGTTCGTTTTCCC ACGAGTCGGCATGGTTACGGTTGAACGACGGGCTGCCCTGCCTGCGGCGA CGGTATTCGCGATTCGGCCGCGCTCGACCGGGGGCGTGGTGGCGGCCTCG ACGGGTGGGATACTTGGATCAACGGACCTGGTGCACTTGCAACACCGGGA AACAGGTTTTTTCTTGGCGGCAATGCCTCGGGAGATCGAGGCGGGGGACG AGAGGGTCGAGCTCACTGTCGTCAAGTCCCCTTTGACGAGCGAGTACTGG AGAATCACTCGGGCATCGGAGCGCGAGAAAAATGCAACGAATCATATCCT TAGGGCGCTGGCGCAGCTCAAGTACTGGAGAATCACTCGGGCATCGGAGC GCGAGAAAAATGCAACGAATCATATCCTTAGGGCGCTGGCGCAGCTCAAG GCCGCGTTGAAACCCCTCTTGGATGAGGTGGACAGGCTTCCGCTATATAT CGGCGAGCGTTCCATTTCGCATTGCCCGCCTCCCGTGCCATCGGCGCGCG TCTTGCGGCCGGCGACCATCGCCGTCGCGCACTTCCACTCCGTCATCGCG CGTGGAGTTGGTTGGTGGTTGAAGAGGGAACCGAAAGGCGCAGATCGTGC AATGTCGGGGGCGACGAGGGCCAGTGTACAGGAGGGTCCGAGGATCGCGG GGCAGAAGTTAAAGGGCCTCGGCGAACGCACGGGGCGGGGGGCGGCGGTC TGGGCGCTCGCGCGAAGCACCAGTTCTGACATGGCGGAGGACTCGGGTTT GATCAGGAAAAAAGACCGGGCAAGAGGAAGTTTGAATAGTGGGAAATATA GTGGTGTTTGGTCCGTGGTATCGGCGGGGGTGACCGGAGGCTCTTCTGCA GACTCGACCTCCCTTGACGAGTTTTATGGGAACCCGAAGCTAGGGTTTCA GCTACTGCTGAGAGAGCAGGGCGTTATTGTGGCGCTGTTCAATGCCATGG AGAAGGCCGCGTTGAAACCCCTCTTGGATGAGGTGGACAGGCTTCCGCTA TATATCGGCGAGCGTTCCATTTCGCATTGCCCGCCTCCCGTGCCATCGGC GCGCGTCTTGCGGCCGGCGACCATCGCCGTCGCGCACTTCCACTCCGTCA TCGCGCGTGGAGTTGGTTGGTGGTTGAAGAGGGAACCGAAAGGCGCAGAT CGTGCAATGTCGGGGGCGACGAGGGCCAGTGTACAGGAGGGTCCGAGGAT CGCGGGGCAGAAGTTAAAGGGCCTCGGCGAACGCACGGGGCGGGGGGCGG CGGTCTGGGCGCTCGCGCGAAGCACCAGTTCTGACATGGCGGAGGACTCG GGTTTGATCAGGAAAAAAGACCGGGCAAGAGGAAGTTTGAATAGTGGGAA ATATAGTGGTGTTTGGTCCGTGGTATCGGCGGGGGTGACCGGAGGCTCTT CTGCAGACTCGACCTCCCTTGACGAGTTTTATGGGAACCCGAAGCTAGGG TTTCAGCTACTGCTGAGAGAGCAGGGCGTTATTGTGGCGCTGTTCAATGC CATGGAGAAGATATTTCGCGCGCGAGACAACCTGCTCATGAACACCCTTT GGTGGGAGGATACCGAGATTGTCAGCGTTTCGACCCAACACACGTCGTTG GGGGATACAAGCGAGGCGGAAGGGGCGGCTAACGGGGAGAATGGCGTGGA AAACGCGGAAGCGCGATTGATCCTTCGCCGCCTTGTTCGCGAGGCAATGG CGCTCGCTGATTTTTTCGCGAAAGACCACGTTCGGGGGAAGATATTTCGC GCGCGAGACAACCTGCTCATGAACACCCTTTGGTGGGAGGATACCGAGAT TGTCAGCGTTTCGACCCAACACACGTCGTTGGGGGATACAAGCGAGGCGG AAGGGGCGGCTAACGGGGAGAATGGCGTGGAAAACGCGGAAGCGCGATTG ATCCTTCGCCGCCTTGTTCGCGAGGCAATGGCGCTCGCTGATTTTTTCGC GAAAGACCACGTTCGGGGGAAGATGGTATTGGAACCCTTCACCCTCTTGC TTCGAGAGATGATTGGTAGCGGCCTGGGCGCGTGCGAGCTCCTAGCAACA ATTCGGCGAGATAATCCGCGAACGCACCTAAACGTCACCGCAAAGCGCAT ACAGGAGATGGTATTGGAACCCTTCACCCTCTTGCTTCGAGAGATGATTG GTAGCGGCCTGGGCGCGTGCGAGCTCCTAGCAACAATTCGGCGAGATAAT CCGCGAACGCACCTAAACGTCACCGCAAAGCGCATACAGGAGATCGTGGG ATCACTGCCGGAGTCTCGTGATCTCGCCAACAGCATGCGCCTGATGGCGA GCATCTGTCGGATCGGCCACGCCCTCCTCCCGACGGTTCAGCGACTCGTG GCCGTGACGGCGCTCGTCGGCGACAACGCCTCCGCGTCATTCGACCACGC GGGTAGCATCTTCGGCAGCGCCGATGTCAATACAACGAGCACCACGACCA TAAGCGTGAGCGGAAGCAGCATTGCCCATGGTGGCGACGGTATCGTTAAC GGCGACAGCGACGGTAGTGAGGAAGTTCAGAAAGATGAGATGGACGACGA GGTTCTCGACCGAGAACGGGAAGCTCGAATGAGAGCGGGGACCGGAGCCG GAGTCGGCGAGAGAAGAAGCGTCACTTTCAACAACCCGCGAGGTCTCTTT CGTTATGAGCTCATATCGAACGCCGAACCAAGCGGGAGACGCGTCGGTTC CAGAAGAAGGGGTAAAGGCCATTCCTTTTCGTACGAGAGGAACCAGGCTC CGTGGTGGTCGGCCGACGGTACTCGAGGTATTCGAGTTAAACTAGAAGGG CTCGTCAAGAATCCCCTTCCTACGAGAGGACAACTGCCCCGGCTGAAAGA GCTCCTCGCGCAGAGGCGTATGTCTTCCAACGAAGTGGTGGTGTTTGAGG CGTGGCTCGAGGGGGGGGGGTCTTCGAGGACGGTCGTTCGAGTCGTGAGC AGGGGTGGGCTAGAAGAGTTTTCGGGGGGACGCGGAGGCGCGGGGGCTAG CTCGTCGGCGGGAGATCTTTTGGAATACTTTGTCGAGTCGGTGAAGCTGA TGTCAACTCTGTGCCGGGAGCGCCACGCTGAGAACATCGTTCTCCTCCGC GCGATGAAAGGCACCACTTACAAGATCGTGGGATCACTGCCGGAGTCTCG TGATCTCGCCAACAGCATGCGCCTGATGGCGAGCATCTGTCGGATCGGCC ACGCCCTCCTCCCGACGGTTCAGCGACTCGTGGCCGTGACGGCGCTCGTC GGCGACAACGCCTCCGCGTCATTCGACCACGCGGGTAGCATCTTCGGCAG CGCCGATGTCAATACAACGAGCACCACGACCATAAGCGTGAGCGGAAGCA GCATTGCCCATGGTGGCGACGGTATCGTTAACGGCGACAGCGACGGTAGT GAGGAAGTTCAGAAAGATGAGATGGACGACGAGGTTCTCGACCGAGAACG GGAAGCTCGAATGAGAGCGGGGACCGGAGCCGGAGTCGGCGAGAGAAGAA GCGTCACTTTCAACAACCCGCGAGGTCTCTTTCGTTATGAGCTCATATCG AACGCCGAACCAAGCGGGAGACGCGTCGGTTCCAGAAGAAGGGGTAAAGG CCATTCCTTTTCGTACGAGAGGAACCAGGCTCCGTGGTGGTCGGCCGACG GTACTCGAGGTATTCGAGTTAAACTAGAAGGGCTCGTCAAGAATCCCCTT CCTACGAGAGGACAACTGCCCCGGCTGAAAGAGCTCCTCGCGCAGAGGCG TATGTCTTCCAACGAAGTGGTGGTGTTTGAGGCGTGGCTCGAGGGGGGGG GGTCTTCGAGGACGGTCGTTCGAGTCGTGAGCAGGGGTGGGCTAGAAGAG TTTTCGGGGGGACGCGGAGGCGCGGGGGCTAGCTCGTCGGCGGGAGATCT TTTGGAATACTTTGTCGAGTCGGTGAAGCTGATGTCAACTCTGTGCCGGG AGCGCCACGCTGAGAACATCGTTCTCCTCCGCGCGATGAAAGGCACCACT TACAAGGAGCTTATGGAGGTCGTGCGCTGCGAGACGGTCCCCATCTCCGT GCGTGGTGCGTTTGCCCTGCTTGTCGAGCGCATGCACCTCGACGTGGCTC CTCTGCTGCCGCAACCTGCAATTAGGTATGATCGTAAAGATGAACAGTTT GATGTTCGGTGTAATACATCGGTGTAAGAGCTTATGGAGGTCGTGCGCTG CGAGACGGTCCCCATCTCCGTGCGTGGTGCGTTTGCCCTGCTTGTCGAGC GCATGCACCTCGACGTGGCTCCTCTGCTGCCGCAACCTGCAATTAGGTAT GATCGTAAAGATGAACAGTTTGATGTTCGGTGTAATACATCGGTGTAA back to top
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