mRNA_H-elongata_contig18751.5117.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18751.5117.1
Unique NamemRNA_H-elongata_contig18751.5117.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig18751.5117.1 vs. uniprot
Match: D8LDY4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY4_ECTSI)

HSP 1 Score: 519 bits (1336), Expect = 4.700e-163
Identity = 360/541 (66.54%), Postives = 407/541 (75.23%), Query Frame = 1 
Query:    1 KCVESQLAALGARRKKQERAVMLLQRESKKCEDLQGGLAQLKRQKVVLQKRQREAAKRHREYEQRMSRDIQAMRKKNNRDLRHMSKMALEVRRQKAATDRKSIQVGRIGDKLKKTEEHLLRLLSLRKQQSVADRARARRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXGHPEKVAAPAAKQASEVSEARVLAAKHLLDRAVSSRVEQEALRQEFAAKLRAYDEATSLQVSNIGMLRDYRGQLHDLKA------GGGGSGSGPTGVQTRAGAENVDPGSSFAASTIG---GVGRNHLGGRPGNRGASRRRKASVGDVDTLEGQRAVLHALIQETEKAVDETQERLEMLGVELDDLCRRLGMGDSFQARSILKRHELGPDVPGSPAVCATSLGHLEFTALEGLMPVEARQLVTALVDDVTAAGIGEMVLKEEASKQDAEMMELREKNKSMKDELFRLSQRYSRRMSMMKVDHTRDMVRLSMLDSCGDSLE--DSSSSCLGSSSGLLNEHEDEDA---DEPALRTPSVPVKAVGACDDRVAGLG 1581
            K VESQLA+LGA++KKQERAVMLL+RE+KKCEDLQ GL QLKRQKVVLQKRQ+EAAKRHREYEQRMSR+IQAMRKKN++DLR MSKM LEVRRQKAAT RK+ QVG++GDKLKKTEEHLLRLL+LRKQQ  ADRARAR  G      XXXXXXXXXXXXXXXXXXXXX         A     EV EARV AAKHLLD+A++S+VE+ +LRQ+F+ K+R+YDE TS QV NIGMLRDYR QL +LKA       GGG  +G       AGAENVDPG++    + G   G G+   GG P     S    +  GD+DTL+GQRAVL ALIQETEKAVDETQERLEM+GVELDD+CRRLGMGDSFQ RS +   E    V G     A+ LG  EF ALEGL PVEARQLVT+LV+D TAAGIG+M+ +EEA+KQ AEM ELR+KNKSMKDELFRLSQRYSRRMSMMKVDHTRDMVRLSMLDS  DS +  D SSSC GS SG++ E E   A   DE   RTP+ P   V    DR  GLG
Sbjct:  581 KGVESQLASLGAQKKKQERAVMLLKREAKKCEDLQEGLGQLKRQKVVLQKRQQEAAKRHREYEQRMSREIQAMRKKNSKDLRSMSKMELEVRRQKAATARKTSQVGKMGDKLKKTEEHLLRLLALRKQQGTADRARARGAGGAGRRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----EVGEARVSAAKHLLDQAIASKVERASLRQDFSNKIRSYDERTSQQVCNIGMLRDYRAQLRELKATVKQEEAGGGDAAGD------AGAENVDPGATRGGRSFGSTGGKGQKKAGGVPVAGRPSSTSSSIGGDMDTLDGQRAVLEALIQETEKAVDETQERLEMVGVELDDMCRRLGMGDSFQGRSTVCDDE-STSVDGRRD--ASGLGPREFKALEGLSPVEARQLVTSLVEDATAAGIGDMLRREEAAKQAAEMAELRDKNKSMKDELFRLSQRYSRRMSMMKVDHTRDMVRLSMLDSVTDSNDASDDSSSCFGSLSGVVPEEEGVTAGGSDEGGHRTPAGPPAEV--LSDRTVGLG 1105
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BLAST of mRNA_H-elongata_contig18751.5117.1 vs. uniprot
Match: A0A6H5KIA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA3_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 2.030e-47
Identity = 123/226 (54.42%), Postives = 141/226 (62.39%), Query Frame = 1 
Query:  919 VDTLEGQRAVLHALIQETEKAVDETQERLEMLGVELDDLCRRLGMGDSFQARSILKRHELGPDVPGSPAVCATSLGHLEFTALEGLMPVEARQLVTALVDDVTAAGIGEMVLKEEASKQDAEMMELREKNKSMKDELFRLSQRYSRRMSMMKVDHTRDMVRLSMLDSCGDSLE--DSSSSCLGSSSGLLNEHEDEDA---DEPALRTPSVPVKAVGACDDRVAGLG 1581
            +DTL+GQRAVL AL+QETEKAVDETQERLEM+GVELDD+CRRLGMGDSFQ  S +   E G  V G      + LG  EF ALEGL PVEARQLVT+LV+D TAAGIG+M+ +EEA+KQ                               MKVDHTRDMVRLSMLDS  DS +  D +SSC GS SG++ E E   A   D    RTP+ P   V    DR  GLG
Sbjct:    1 MDTLDGQRAVLEALVQETEKAVDETQERLEMVGVELDDMCRRLGMGDSFQGWSTVCDDE-GGSVDGRGD--GSGLGPREFKALEGLSPVEARQLVTSLVEDATAAGIGDMLRREEAAKQ-------------------------------MKVDHTRDMVRLSMLDSATDSNDAGDDNSSCFGSLSGVVPEEEGVTAGGSDGGGHRTPAGPSAEV--LSDRTVGLG 190
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BLAST of mRNA_H-elongata_contig18751.5117.1 vs. uniprot
Match: A0A7S2QVI8_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVI8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.160e-9
Identity = 46/139 (33.09%), Postives = 84/139 (60.43%), Query Frame = 1 
Query:    7 VESQLAALGARRKKQERAVMLLQRESKKCEDLQGGLAQLKRQKVVLQKRQREAAKRHREYEQRMSRDIQAMRKKNNRDLRHMSKMALEVRRQKAATDRKSIQVGRIGDKLKKTEEHLLRLLSLRKQQSVADRARARRGG 423
            VE  LA   +  +KQ++     +RE++K   ++  + +LK  +V L K+Q+E   RHR + +  +R+IQ ++KK  +  ++++K+  E ++ K A DR++    +I DKLK+TE HL+RLL++RK++     A   + G
Sbjct:  636 VEESLARARSESRKQQQMYKSAEREAQKARAMERKIEELKLGRVNLMKKQKETIARHRAFTENKTREIQTLKKKERKQGKNLTKLETECKKHKKALDRRTSYCHKITDKLKQTEVHLMRLLAMRKRELEKSNAARSKAG 774
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BLAST of mRNA_H-elongata_contig18751.5117.1 vs. uniprot
Match: A0A7S2PLE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLE1_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 9.890e-9
Identity = 40/127 (31.50%), Postives = 84/127 (66.14%), Query Frame = 1 
Query:    7 VESQLAALGARRKKQERAVMLLQRESKKCEDLQGGLAQLKRQKVVLQKRQREAAKRHREYEQRMSRDIQAMRKKNNRDLRHMSKMALEVRRQKAATDRKSIQVGRIGDKLKKTEEHLLRLLSLRKQQ 387
            VE+ L+   +  ++ +      ++E++KC  L+  +  LK+ K  L ++Q+EAA +H+E+ +  +R+IQA+++K+ ++ + ++K+  E R+ KA+ +R+     ++  KLK+TE HL+RLL++RK++
Sbjct:  663 VEASLSRARSETRRHQEMYRKAEQEAQKCRSLENKIYHLKQGKAALVRKQKEAAAKHKEFTEAKAREIQALKRKDRKNGKQVTKLEAECRQYKASLERRKEYGQKMAAKLKQTETHLMRLLAMRKRE 789
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BLAST of mRNA_H-elongata_contig18751.5117.1 vs. uniprot
Match: A0A7S1BYC1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYC1_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.280e-8
Identity = 64/221 (28.96%), Postives = 110/221 (49.77%), Query Frame = 1 
Query:   79 ESKKCEDLQGGLAQLKRQKVVLQKRQREAAKRHREYEQRMSRDIQAMRKKNNRDLRHMSKMALEVRRQKAATDRKSIQVGRIGDKLKKTEEHLLRLLSLRKQQSVADRARARRGGRXXXXXXXXXXXXXXXXXXXXXXXXXXGHPEKVA-APAAKQASEVSEARVLAAKHLLDRAVSSRVEQEALRQEFAAKLRAYDEATSLQVSNIGMLRDYRGQLHDLK 738
            E+KKC  L+  +  LKR KV L ++QREAA+R+RE+ +   R+I  ++K   +  +  S +  E R+QK A +R++    ++ +KLK+TE HL+++LSLRK+  +  R++  RG R                             + +A AP + + + +        K L+D+ V  RV+++ LRQ    ++  Y          +  LRD   Q++ LK
Sbjct:  110 EAKKCRTLEIKINDLKRNKVSLVQKQREAAQRYREFTENKQREILLLKKNERKVGKQFSLLETECRKQKIALERRNNYCSKLSEKLKQTESHLMKVLSLRKKD-LQSRSKNYRGIRASSKHGSSRRMSSSRPFDVLVSASCESDNDNIAFAPISDEVTSL--------KFLIDKIVRERVDEDILRQNLDDRVNEYS-------CVMRSLRDEIAQINILK 314
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BLAST of mRNA_H-elongata_contig18751.5117.1 vs. uniprot
Match: A0A7S4J1K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1K6_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 9.110e-5
Identity = 40/137 (29.20%), Postives = 80/137 (58.39%), Query Frame = 1 
Query:    7 VESQLAALGARRKKQERAVMLLQRESKKCEDLQGGLAQLKRQKVVLQKRQREAAKRHREYEQRMSRDIQAMRKKNNRDLRHMSKMALEVRRQKAATDRKSIQVGRIGDKLKKTEEHLLRLLSLRKQQSVADRARARR 417
            VE+ LA   +  +K ++     ++E++KC+ L+  + +LK+ +V L K+QREA+ +H+E+ +  +R+IQA+++K  +  + +SK+  E R+ K   +R+     ++         HL+ LL+L+K++     A  RR
Sbjct:  535 VEASLARARSETRKHQQMYRKAEQEAQKCKTLENRVKELKQGRVNLIKKQREASTKHKEFTEAKTREIQALKRKERKAGKQVSKLEAECRKYKGNLERQKQYALKLXXXXXXXXSHLMSLLALKKRKRQTAPATRRR 671
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18751.5117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LDY4_ECTSI4.700e-16366.54Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KIA3_9PHAE2.030e-4754.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2QVI8_9STRA1.160e-933.09Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A7S2PLE1_9STRA9.890e-931.50Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1BYC1_9STRA1.280e-828.96Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S4J1K6_9STRA9.110e-529.20Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18751contigH-elongata_contig18751:310..6900 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score528.1
Seed ortholog evalue4.7e-147
Seed eggNOG ortholog2880.D8LDY4
KEGG koko:K10395
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0244@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-23_003320.1
Exons11
Model size1581
Cds size1581
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930071.380449-CDS-H-elongata_contig18751:309..4441622930071.380449-CDS-H-elongata_contig18751:309..444Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 310..444 +
1691679269.9233477-CDS-H-elongata_contig18751:309..4441691679269.9233477-CDS-H-elongata_contig18751:309..444Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 310..444 +
1622930071.3974814-CDS-H-elongata_contig18751:1287..13651622930071.3974814-CDS-H-elongata_contig18751:1287..1365Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 1288..1365 +
1691679269.9491546-CDS-H-elongata_contig18751:1287..13651691679269.9491546-CDS-H-elongata_contig18751:1287..1365Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 1288..1365 +
1622930071.4148319-CDS-H-elongata_contig18751:2693..27921622930071.4148319-CDS-H-elongata_contig18751:2693..2792Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 2694..2792 +
1691679269.9647408-CDS-H-elongata_contig18751:2693..27921691679269.9647408-CDS-H-elongata_contig18751:2693..2792Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 2694..2792 +
1622930071.4257915-CDS-H-elongata_contig18751:3119..33121622930071.4257915-CDS-H-elongata_contig18751:3119..3312Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 3120..3312 +
1691679269.975473-CDS-H-elongata_contig18751:3119..33121691679269.975473-CDS-H-elongata_contig18751:3119..3312Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 3120..3312 +
1622930071.4393709-CDS-H-elongata_contig18751:3774..39531622930071.4393709-CDS-H-elongata_contig18751:3774..3953Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 3775..3953 +
1691679269.9831376-CDS-H-elongata_contig18751:3774..39531691679269.9831376-CDS-H-elongata_contig18751:3774..3953Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 3775..3953 +
1622930071.457485-CDS-H-elongata_contig18751:4116..43161622930071.457485-CDS-H-elongata_contig18751:4116..4316Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 4117..4316 +
1691679269.9911084-CDS-H-elongata_contig18751:4116..43161691679269.9911084-CDS-H-elongata_contig18751:4116..4316Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 4117..4316 +
1622930071.46947-CDS-H-elongata_contig18751:4929..50231622930071.46947-CDS-H-elongata_contig18751:4929..5023Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 4930..5023 +
1691679269.9995735-CDS-H-elongata_contig18751:4929..50231691679269.9995735-CDS-H-elongata_contig18751:4929..5023Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 4930..5023 +
1622930071.480432-CDS-H-elongata_contig18751:5439..55581622930071.480432-CDS-H-elongata_contig18751:5439..5558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 5440..5558 +
1691679270.0085316-CDS-H-elongata_contig18751:5439..55581691679270.0085316-CDS-H-elongata_contig18751:5439..5558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 5440..5558 +
1622930071.490943-CDS-H-elongata_contig18751:6030..62081622930071.490943-CDS-H-elongata_contig18751:6030..6208Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 6031..6208 +
1691679270.017438-CDS-H-elongata_contig18751:6030..62081691679270.017438-CDS-H-elongata_contig18751:6030..6208Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 6031..6208 +
1622930071.5033133-CDS-H-elongata_contig18751:6336..64291622930071.5033133-CDS-H-elongata_contig18751:6336..6429Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 6337..6429 +
1691679270.0263386-CDS-H-elongata_contig18751:6336..64291691679270.0263386-CDS-H-elongata_contig18751:6336..6429Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 6337..6429 +
1622930071.5190487-CDS-H-elongata_contig18751:6687..69001622930071.5190487-CDS-H-elongata_contig18751:6687..6900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 6688..6900 +
1691679270.035843-CDS-H-elongata_contig18751:6687..69001691679270.035843-CDS-H-elongata_contig18751:6687..6900Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18751 6688..6900 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18751.5117.1prot_H-elongata_contig18751.5117.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18751 310..6900 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18751.5117.1

>prot_H-elongata_contig18751.5117.1 ID=prot_H-elongata_contig18751.5117.1|Name=mRNA_H-elongata_contig18751.5117.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=527bp
KCVESQLAALGARRKKQERAVMLLQRESKKCEDLQGGLAQLKRQKVVLQK
RQREAAKRHREYEQRMSRDIQAMRKKNNRDLRHMSKMALEVRRQKAATDR
KSIQVGRIGDKLKKTEEHLLRLLSLRKQQSVADRARARRGGRRVGGAALA
KAAKGGAAQGVSGGGEAGGHPEKVAAPAAKQASEVSEARVLAAKHLLDRA
VSSRVEQEALRQEFAAKLRAYDEATSLQVSNIGMLRDYRGQLHDLKAGGG
GSGSGPTGVQTRAGAENVDPGSSFAASTIGGVGRNHLGGRPGNRGASRRR
KASVGDVDTLEGQRAVLHALIQETEKAVDETQERLEMLGVELDDLCRRLG
MGDSFQARSILKRHELGPDVPGSPAVCATSLGHLEFTALEGLMPVEARQL
VTALVDDVTAAGIGEMVLKEEASKQDAEMMELREKNKSMKDELFRLSQRY
SRRMSMMKVDHTRDMVRLSMLDSCGDSLEDSSSSCLGSSSGLLNEHEDED
ADEPALRTPSVPVKAVGACDDRVAGLG
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mRNA from alignment at H-elongata_contig18751:310..6900+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18751.5117.1 ID=mRNA_H-elongata_contig18751.5117.1|Name=mRNA_H-elongata_contig18751.5117.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6591bp|location=Sequence derived from alignment at H-elongata_contig18751:310..6900+ (Himanthalia elongata Himel1 dioecious)
AAGTGCGTCGAGAGCCAGCTGGCGGCCCTCGGTGCGCGAAGGAAGAAGCA
GGAGCGGGCGGTGATGCTGCTGCAGAGAGAATCGAAGAAATGCGAGGACC
TGCAAGGGGGTCTAGCCCAGCTCAAGAGGCAGAAGGTGAAGTATATATGC
TGCAGTACACAGAGAAGACTTTTTTCCCTTCATTCGTTTCTTATGACCAA
AATTGGCCCGGGTTTTGTGCAGAGGTTTGGCATTTTCTGTCAGGGTAGCA
TCTAGTTGTATCGAAGAACTGCGCTGAGTCTTATTTTTGAAGGATGAGGA
AAGGGTTCTCCGTGGGGAGACATGCAAGCAGGTGCTTGTCATCGTCTACG
CTTGCTTCTTTTTTCGTCTTAAACAAAAGTTTTTTTAATAAAAAAGAAAG
AGAAAGTACGTGGAAAGTTTAAGCTTGTATTTTCTCTCGTGGATCGTTCT
GAGGCTTCTGTGATCGTCACGATAGTTTTTGTACGCACACGTCGGCCACC
TTTTTAGCGGAGTGCTATTTCGAAAGAGGTTTTTTTTTCGGCGGGTGCTT
ACGCTCTATCGTCGACACGTTATAGTTGGCGGTTAGCAACACTTAACTTA
AAAATAGTCTGGTTGGTAAGCCTCGTTTAGTATCTAGGGATGGATTTTGA
TTTGTTTCTACTCATCTCCAAGTGCTTTGGTTTGTCTGTCTTTCTTTCCC
AGTGTTGTGACCAAAAGTGTTTTTTCATTTTTTCTTTGTTTTTATGTTTT
TCGTGAATTCTTGTGTGTCGTTTTAATATTGTTTTTTACTAGTTTCGTTT
CTTTTCCTCTCTCTGGTTTGTGTGTTTGTGTGTATTTTTTAAATTGCGCT
TAACGGCGTAATCAACCCCTGTAATGTAGTTCATTATATGCTATAGTATC
GTTTTGTTAATACAGGTACCGGTATGTCTTTGTATTGATTTTTTATATAT
ATTGCTGCTTATAAATTACATAAAAAAGGTGGTGCTCCAGAAGCGCCAAC
GAGAGGCGGCCAAGAGACACCGCGAGTACGAGCAGAGGATGTCCAGAGAT
ATTCAGGTGCATTGTTGGCTTCGTTTCTTTCCTCATCCCCACCCGCTGAT
GGCCTCTTATTTTGCAACTCCTTATATGATACGGATCCATTTTTCGATCC
ATTTTCTCGTTTGACGTATTATTGAAAAGTAAAGGGGCACCAGAAATAGA
CCTGGAATGGTCAAGATGATTAATTCCTTCATTTTTGTTTAAATACAGCC
CTTATCCTGTGAGGTGTAATATCCACTTTTGATTTATCTTTTTCCAGCCC
TTTCAAATTGATTCTGATCTTTTTGTCAGTCCTTTAGTTAGGCCTTGACC
TGCTTTGCTTATTTTTCATTTTTTTCATGCTTATTTTCCATTTTTTTTCA
TCTTATTTTTCCAGGAAGTCATATGTTCAAAATAGCGGATTATGCGGGCG
TACTTATGTTTGCTTTTCTTCGCCTATTATGCTTAATTCATGCTCGTTAT
GCTCGGCATATGCACGTGCTTGATGCATTCGTATGTTTCTGTGCTTGATG
CATTCGGTATCATCATAGGTCGCTCGTTACGCTGTCGACAATCGACCCTT
GTTGTACATACCATTTTTTTTATTGCAGATGTTTTTGTATCTGTATTCAA
ATATTTCTTCGGGGACACTTTCAATATTCGAAACATTGCGACATGCCCTC
GTCCCTTCACCCTCCGTCAGTCGTGTCGCCATGTCGCCAGAAGTAGGTTT
CATATTTTACCTTTGTGTTGTATCAACATCCCCCAACGTCTATGTTTTAT
AAAAAGAACCCGAGGTAAAGACTATTAAGTAGAAAGACAAAAGCAAAAAA
AAAAAGAACCCGTGTACCGTGCACCGTTTCCCCATTTTTCCCAGCACGGC
ATACTCCTGTTTCCTATTTCCTATTTTTCCCGCCCTCTGTTGTACTTGAG
AAGAGCGGATGCTGCAATGCGGTCGCTGAAGCTTGACTCCTGCCTTTCGT
CCATGCAAGCCATTTGCTCTGTGTTGGTCAAAGGAGGTATCTGAGCTACC
CCTACCCCCAAAGTAAAGCAAGCATAACCACGTTTATGCGCGACCTTCCC
TGTTATGCGTTTTTTTATACCCAAAGATGCTGTTATGCTCTCCAATTTAT
GCTTTTGCTTATGCTCAAAAGGCCCATTTTTGCCAAAAGTTATGTGAGCA
TAATAGGTCAGAGGGTCTATCTTTAGTTGAGTTGGAGCGTTTAAAATTCA
ATGTTTTTTGTCGTTTCTCAGTTTTTTTGTTCAGCTGTTCATGAATCCTG
TGCTGTAGTTGATTTATGATGAACTGCGTTTGGCCCGGTCGAGAATCTCC
CCCTTATGCCTCCCGCCCCCCCTTCAATACAAAGGCCATGCGGAAGAAAA
ACAATCGCGATCTCCGCCACATGAGCAAGATGGCGCTGGAGGTTCGCCGG
CAGAAAGCGGCAACGGACAGGAAGTCGATTCAGGTAGAACACATTTTTAC
TCTCTGCCCAATCGTTCATATATGAAACTCACACCCGCATCCGCTGGGTG
TTCCTAGCGGAGGTGCCGGGGAGAGGGTAGTAAAGGGGCGGGGAGTAGGA
AATACCGAAGCTTGATACGGGCGATCACCCCACGTAGCACACTAGTGTTT
CGCATGTCGTTGCTTTCTATCACACGTTGCCTGGTAGATATTTTAAAATG
GTAGTACTTGAAAATCAATTATTGAAACAATGCCGGGCTTTGACTTTCTC
TCTCTTTTCTGACTGTTTAATTGATTATTCGGGGATTGGGGGGCGGGGGT
CAATGTGCAGGTGGGCCGTATCGGCGACAAACTCAAGAAAACCGAGGAGC
ATCTGCTGCGGCTGCTTTCGCTCAGGAAGCAGCAGAGCGTGGCTGACCGA
GCCAGAGCCCGTCGTGGAGGGCGACGCGTGGGTGGTGCTGCTTTGGCTAA
AGCAGCAAAGGGGGGAGCGGCGCAGGGAGTGTCTGGTGGAGGGGAAGCTG
GAGGTGGGTTTGTGAAGGGTAAAATGCTTGATTTCTTTCTCTTTCTTCAG
TACATTTTTATAAGAGGAAGCTTGACGTTTCTTTTATTCTTGATCAATAT
GGTATATAATTAGTAACCACCTAGGATGTAAACCTCTTAGTGCAGAAATC
GTAATTTTATTTCGCGGTACACTATCACGGGAATCAAAGTTATATCATTG
GCTCACGAGCTATGGAAGTCTTAGTTTATATATTGTATCGCGAAAATTTT
TTTGGAAGGTGTGAATTAACCGGAGAGAGATAGGATGGTCCCTTAGAGCT
AAAGCCAAGATAGGCAACGTTGCAGTGAGTGTCAGAGGACCCGTGATATT
GAAACCCTATGTTCTAGAGTATTATCCCCCCTCCCCGTGTCGAACGCCTC
TGGGTAACAAAGTTTTAGTGTTTTTCCCTCTTTTCGTTCATCCGTCACAT
GGTTCGACGCTACAGGGCATCCCGAAAAGGTCGCCGCTCCCGCCGCAAAG
CAAGCCTCCGAGGTTTCGGAGGCGAGGGTCTTGGCCGCGAAGCACTTGCT
GGACCGTGCGGTCTCGTCCAGGGTGGAGCAGGAGGCACTGAGGCAGGAGT
TCGCGGCCAAGCTTCGCGCGTACGATGAGGCAACTTCGCTCCAGGTGTGA
CAACACGTGACAAATGTTTTAGGCCACTTCGTTGATTTGTTTTTATTATT
TTAGAGGAAATGAAAACATGAAATATAATGAAATCAAATGAAGTGGATAT
TTTATGACACGATGTAAGTTCAAGCCCGCCGACGGCCGGTGTGAAAACGC
CTCGCAGGTCTCTAACATAGGCATGCTAAGGGACTACCGTGGCCAGCTTC
ATGATCTTAAGGCTGGTGGTGGTGGAAGCGGCTCTGGCCCTACGGGCGTC
CAGACAAGGGCCGGTGCGGAGAACGTTGATCCCGGAAGCTCTTTCGCCGC
TAGCACCATCGGCGGCGTTGGCAGGAACCACCTTGGCGGACGCCCCGGCA
ATCGTGGGTTGATGATGCAGCGCAGCATAGGCTTGGGTGTAGACCGCCCC
CCCCCCCACTTATATTTCGTTCCCTTCTTGGTTCTTCTTAAAAACACACA
TGAACTCATTCAAATCCTCCGAACATTCACGCCTTCTTAGCACCGTGAAA
GGTGCAGTCCAGAAGACCAACAATCGTCAGGTTTGTGGTAGTATATTGTT
GTACATGTGTGTCTTTTCTTTATTTTTGTCTTATAAGCTCGCTCAAAGCT
TTCTTGATTCGCGAAGGGAGAGAGAAAACAGTGATTGATAAGGCACCAAA
CCGGCAATAATGCCTCCTTAAATATTCCCCAAGTTAGAGATGCAGCATGG
GAAACTGAATCCCCCCAAAAACTACCACTAGGTAGGTAGCCCGTTGGGAA
GCGTCTTTTTCACCGTCCAACTCCAAAACTCTTAGGTAGTCAGAAGCCGA
ACCTAAGCTTTAAGACGTGTAGCACGCTGCTGATTTTGATTATTTTAGTT
TAGCTTGATGGGATATGCTGCACTCTTTTTTCCGCGACGGGTGACTTGAT
CAGGGGTCAGAAAAAGCGACGGCAGCGGTAGTACGAGTAGCGCCAGAGAC
GGAGAAGGCGCCGGCACCAGCGCCTCGAGGAGGAGGAAGGCTTCCGTCGG
AGACGTGGACACTCTGGAGGGTCAGAGGGCGGTCTTGCATGCACTGATCC
AGGAGACCGAAAAGGTTTTTGTCGCGCAAATATATCAGCTGGTTGTTTTT
CGCACTCGTTTTGCGTCGTGTGTGCATTTTTTCTTCGATGGGTATGTTGG
TGTTAATGTGTGTATGTGATTTGGAAGAGGTCCTAAGTATTTTTTTTCTC
ACCTGACTTTTCCATTGCTTTTTTTTCTTTATATCCTAGATGCTTAATTA
TATCTTTATATATATAAATATATGGGGGGTGGGAAGGAGGAGGGGTTAAG
GTCGTTAGGAATTTATCTCCACATTCCACTTATATGGCGGCGGTTGCATT
TTTGCTTTGCTGACGTTTTGTTTAACTTTTTCCTATCATTACTTTTGCAT
ACCGTTAGTTTTTTGCTCTTTTAACTGCAAGTGTGTCTCAACGCGTGTGT
GGCCATTCGGCCTTGATCCCGTCCAAACAGGCAGTGGATGAGACTCAGGA
ACGGCTAGAGATGTTGGGCGTCGAGCTGGATGACCTGTGCCGCCGCCTGG
GCATGGGCGACAGTTTCCAGGCAAGATCAATTTTGAAGAGACATGAGTTG
TAATCTAAGAGATCGGATAATGAAAGCAAATCGCTCGAGAGACGGTAGAT
TCTCGGGGAAAAAACATCGTGAGCAACCAAGATGTGGTACACGCGACCAA
GGTAGTTTACAAAAAATGACGATCCCACCCCGCCTGTATCCCCGGTTCAT
GCACGCCTCCGTATTTTTTCGCGAACAAGTTTTACAGTTGTATACCTCGT
CAACTGGTGGTTTTACTTTGCTTATTTTCGTTCTTACGTTTTCTTCTACA
TTGTCTCCCTTCGAGATTCGAACTCCGGCTTGCTACACAACTAGTCCCAC
AAGTTTTTTATGGAGCCGCCGGGAAGTGCACTCTTTGTAGTATACCTGGT
ATATTAAAATGTCTTCTGGATGTTGTTCATTTATGGGTGGGGGGTCTCAC
CAGGGACGCAGCGTAATGACCGAGAAAAGCCGGTTTGATTCTCCGGGAGG
CGGCGGCTTGGTCGGGGACAGGGGGCCGGATGTCCCCGGAAGCCCTGCCG
TGTGTGCCACATCGCTGGGGCACCTTGAGTTTACGGCCTTAGAAGGGTTG
ATGCCAGTCGAAGCGAGGCAGCTGGTGACGGCACTGGTTGACGACGTCAC
GGCTGCTGGGATCGGCGAGATGGTGCTGAAAGAGGAGGCTTCAAAACAGG
TGCGTGGGCATTCTGAGAGACTCTTGCCACAACCCTCGAGCGCCAATGCA
CTCTCTCTTGCCCTCAGACGATATTTTCCATTTGCCTCTCGGTTGTCATG
GGCGTTTTTTTGTTTTGTTTTTTAAAGGATGCAGAAATGATGGAGCTTCG
CGAAAAAAACAAGTCGATGAAGGACGAGCTGTTCCGCCTGAGCCAACGCT
ACTCCAGAAGGATGTCAATGGTGAGAGATGGTAAATGTGGTTCGCGTTCA
CTCTATACTGATTTATACTTTGGACCCTTTCGCGTTTTCTAGGGGGGGGG
CGGGGTCGCAACCAATATTTCCTCTTCACGAAAAGGCGTTTCATGATAAA
AAAACAAAACAATAAAACTGCGTGGTGTTTCTTTCTTTTTAATATAATTT
AATATATACTTTGTATAATTTAATGAAAAGGTTGGTTGATCCCTCTATTA
TCGGCCCGTGTAAAAACCACCTTCGCAGATGAAGGTGGACCACACCCGCG
ACATGGTTCGGCTGTCAATGTTGGACAGCTGCGGCGACTCTTTGGAGGAC
AGCAGTTCCTCGTGCCTCGGATCCTCGTCAGGCCTGCTCAACGAACACGA
AGACGAGGATGCGGACGAGCCAGCTCTTCGAACTCCATCGGTTCCCGTGA
AGGCTGTAGGGGCGTGCGATGATCGTGTGGCGGGTCTTGGG
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Coding sequence (CDS) from alignment at H-elongata_contig18751:310..6900+

>mRNA_H-elongata_contig18751.5117.1 ID=mRNA_H-elongata_contig18751.5117.1|Name=mRNA_H-elongata_contig18751.5117.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3162bp|location=Sequence derived from alignment at H-elongata_contig18751:310..6900+ (Himanthalia elongata Himel1 dioecious)
AAGTGCGTCGAGAGCCAGCTGGCGGCCCTCGGTGCGCGAAGGAAGAAGCA
GGAGCGGGCGGTGATGCTGCTGCAGAGAGAATCGAAGAAATGCGAGGACC
TGCAAGGGGGTCTAGCCCAGCTCAAGAGGCAGAAGAAGTGCGTCGAGAGC
CAGCTGGCGGCCCTCGGTGCGCGAAGGAAGAAGCAGGAGCGGGCGGTGAT
GCTGCTGCAGAGAGAATCGAAGAAATGCGAGGACCTGCAAGGGGGTCTAG
CCCAGCTCAAGAGGCAGAAGGTGGTGCTCCAGAAGCGCCAACGAGAGGCG
GCCAAGAGACACCGCGAGTACGAGCAGAGGATGTCCAGAGATATTCAGGT
GGTGCTCCAGAAGCGCCAACGAGAGGCGGCCAAGAGACACCGCGAGTACG
AGCAGAGGATGTCCAGAGATATTCAGGCCATGCGGAAGAAAAACAATCGC
GATCTCCGCCACATGAGCAAGATGGCGCTGGAGGTTCGCCGGCAGAAAGC
GGCAACGGACAGGAAGTCGATTCAGGCCATGCGGAAGAAAAACAATCGCG
ATCTCCGCCACATGAGCAAGATGGCGCTGGAGGTTCGCCGGCAGAAAGCG
GCAACGGACAGGAAGTCGATTCAGGTGGGCCGTATCGGCGACAAACTCAA
GAAAACCGAGGAGCATCTGCTGCGGCTGCTTTCGCTCAGGAAGCAGCAGA
GCGTGGCTGACCGAGCCAGAGCCCGTCGTGGAGGGCGACGCGTGGGTGGT
GCTGCTTTGGCTAAAGCAGCAAAGGGGGGAGCGGCGCAGGGAGTGTCTGG
TGGAGGGGAAGCTGGAGGTGGGCCGTATCGGCGACAAACTCAAGAAAACC
GAGGAGCATCTGCTGCGGCTGCTTTCGCTCAGGAAGCAGCAGAGCGTGGC
TGACCGAGCCAGAGCCCGTCGTGGAGGGCGACGCGTGGGTGGTGCTGCTT
TGGCTAAAGCAGCAAAGGGGGGAGCGGCGCAGGGAGTGTCTGGTGGAGGG
GAAGCTGGAGGGCATCCCGAAAAGGTCGCCGCTCCCGCCGCAAAGCAAGC
CTCCGAGGTTTCGGAGGCGAGGGTCTTGGCCGCGAAGCACTTGCTGGACC
GTGCGGTCTCGTCCAGGGTGGAGCAGGAGGCACTGAGGCAGGAGTTCGCG
GCCAAGCTTCGCGCGTACGATGAGGCAACTTCGCTCCAGGGCATCCCGAA
AAGGTCGCCGCTCCCGCCGCAAAGCAAGCCTCCGAGGTTTCGGAGGCGAG
GGTCTTGGCCGCGAAGCACTTGCTGGACCGTGCGGTCTCGTCCAGGGTGG
AGCAGGAGGCACTGAGGCAGGAGTTCGCGGCCAAGCTTCGCGCGTACGAT
GAGGCAACTTCGCTCCAGGTCTCTAACATAGGCATGCTAAGGGACTACCG
TGGCCAGCTTCATGATCTTAAGGCTGGTGGTGGTGGAAGCGGCTCTGGCC
CTACGGGCGTCCAGACAAGGGCCGGTGCGGAGAACGTTGATCCCGGAAGC
TCTTTCGCCGCTAGCACCATCGGCGGCGTTGGCAGGAACCACCTTGGCGG
ACGCCCCGGCAATCGTGGGTCTCTAACATAGGCATGCTAAGGGACTACCG
TGGCCAGCTTCATGATCTTAAGGCTGGTGGTGGTGGAAGCGGCTCTGGCC
CTACGGGCGTCCAGACAAGGGCCGGTGCGGAGAACGTTGATCCCGGAAGC
TCTTTCGCCGCTAGCACCATCGGCGGCGTTGGCAGGAACCACCTTGGCGG
ACGCCCCGGCAATCGTGGCGCCTCGAGGAGGAGGAAGGCTTCCGTCGGAG
ACGTGGACACTCTGGAGGGTCAGAGGGCGGTCTTGCATGCACTGATCCAG
GAGACCGAAAAGCGCCTCGAGGAGGAGGAAGGCTTCCGTCGGAGACGTGG
ACACTCTGGAGGGTCAGAGGGCGGTCTTGCATGCACTGATCCAGGAGACC
GAAAAGGCAGTGGATGAGACTCAGGAACGGCTAGAGATGTTGGGCGTCGA
GCTGGATGACCTGTGCCGCCGCCTGGGCATGGGCGACAGTTTCCAGGCAA
GATCAATTTTGAAGAGACATGAGTTGCAGTGGATGAGACTCAGGAACGGC
TAGAGATGTTGGGCGTCGAGCTGGATGACCTGTGCCGCCGCCTGGGCATG
GGCGACAGTTTCCAGGCAAGATCAATTTTGAAGAGACATGAGTTGGGGCC
GGATGTCCCCGGAAGCCCTGCCGTGTGTGCCACATCGCTGGGGCACCTTG
AGTTTACGGCCTTAGAAGGGTTGATGCCAGTCGAAGCGAGGCAGCTGGTG
ACGGCACTGGTTGACGACGTCACGGCTGCTGGGATCGGCGAGATGGTGCT
GAAAGAGGAGGCTTCAAAACAGGGGGCCGGATGTCCCCGGAAGCCCTGCC
GTGTGTGCCACATCGCTGGGGCACCTTGAGTTTACGGCCTTAGAAGGGTT
GATGCCAGTCGAAGCGAGGCAGCTGGTGACGGCACTGGTTGACGACGTCA
CGGCTGCTGGGATCGGCGAGATGGTGCTGAAAGAGGAGGCTTCAAAACAG
GATGCAGAAATGATGGAGCTTCGCGAAAAAAACAAGTCGATGAAGGACGA
GCTGTTCCGCCTGAGCCAACGCTACTCCAGAAGGATGTCAATGGATGCAG
AAATGATGGAGCTTCGCGAAAAAAACAAGTCGATGAAGGACGAGCTGTTC
CGCCTGAGCCAACGCTACTCCAGAAGGATGTCAATGATGAAGGTGGACCA
CACCCGCGACATGGTTCGGCTGTCAATGTTGGACAGCTGCGGCGACTCTT
TGGAGGACAGCAGTTCCTCGTGCCTCGGATCCTCGTCAGGCCTGCTCAAC
GAACACGAAGACGAGGATGCGGACGAGCCAGCTCTTCGAACTCCATCGGT
TCCCGTGAAGGCTGTAGGGGCGTGCGATGATCGTGTGGCGGGTCTTGGGA
TGAAGGTGGACCACACCCGCGACATGGTTCGGCTGTCAATGTTGGACAGC
TGCGGCGACTCTTTGGAGGACAGCAGTTCCTCGTGCCTCGGATCCTCGTC
AGGCCTGCTCAACGAACACGAAGACGAGGATGCGGACGAGCCAGCTCTTC
GAACTCCATCGGTTCCCGTGAAGGCTGTAGGGGCGTGCGATGATCGTGTG
GCGGGTCTTGGG
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