prot_H-elongata_contig1873.5105.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1873.5105.1
Unique Nameprot_H-elongata_contig1873.5105.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length599
Homology
BLAST of mRNA_H-elongata_contig1873.5105.1 vs. uniprot
Match: D7G884_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G884_ECTSI)

HSP 1 Score: 417 bits (1071), Expect = 1.520e-135
Identity = 313/631 (49.60%), Postives = 374/631 (59.27%), Query Frame = 0
Query:    1 MSKLKKLQKERLIVARLGFPDKAMEIDGVIEKIRADLRKERQKKDAKILDLALGKLAMEHRRKLTELEIELERDAKSKREAFRREKNILLRKQESQFARLVDDAIKRAIGKSKSCSCSKTYLCHHNKTASFNTRRPKKEVLHFRKNAKRLRHGGRLEESTAWEEKAAELDAEHLDKWREKVAASLSASAWGGSSSALDQLASQHEREVRRMETAQANERTLMLMRHHTLRRNCDNVIMVEQKKLRTACKKDAEERHRREMLRAQADIEEGTPTRRQKWPASAGSDRCAIEDKLEDYINREELVEAVGRSPVRPRSAPPVRGKRPQL--------NARGEDTVAAEGAR----GDG-NRGGGNEN---EDHDSTGGSSRDLEGFGELEGA----FSYDDYPVAGSLGEPEWVHVPWLGSDS----CCSAGADRRISDT----------PTTT---PPFS--GIKDGAITEE----GGNISDDQG-GEGGVVALENEGGRDVVGVNNMGWLEWSGYSASEARLAAAAELEKSSEL-TGSAVGTNTPAIISAREGREDRTPLSTGVAAGGGKRSREKGSVSPG----RNGEGGEDLKRYDW-DINKVPERPSLLVTSRIPSGSRINKTKARKAR 581
            M+KLKKLQKERLIVARLGFPDKAMEID  IEKIRADLR ER+K D++IL+  L  LA++HR KL  LE EL+ D +    +F RE+ +LLRKQE QF +LVDDAIKRAIGKSK       YLCHHNKTASFNTRRPKKEV+HFRKNAKRLRHGGRL+ES AWEEKAAELDA HLD WRE+VAASL+ASAWGGSSSALDQLA++H+RE+ RMETAQAN  TLMLMRH T RRNC NVIMVE+KK       D E      MLR   + +EG+ T   +   +  S   A                  GR P RP SAPP RGKRPQ         N    +TVAA  +     G+G N G  +E    +D DS G  S DL GF ELEG     FSYDDYP AGS  EPEW+H PW G++S         +D+++ D+          P +T   PP S  G  DG    +    GG  S+  G GE   V  E++  RDV           S  S +E           + EL TG A    +P +  A EG E  + +       GG   R  GSV  G    R   GG +L+RY+W   +  P +PSLL TSRIP+G+R +K + R A+
Sbjct:    4 MAKLKKLQKERLIVARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILEEELAALAIQHREKLASLEQELKEDEQKVSRSFERERAVLLRKQEKQFVQLVDDAIKRAIGKSKK------YLCHHNKTASFNTRRPKKEVIHFRKNAKRLRHGGRLDESAAWEEKAAELDANHLDSWREEVAASLTASAWGGSSSALDQLATEHQREISRMETAQANGWTLMLMRHQTARRNCHNVIMVERKK-------DVEG-----MLRNVIE-DEGSATGEAEGKEAQPSGGTAA-----------------GRPPTRPSSAPPARGKRPQPAAATTKNNNQNLSETVAAPPSATEKAGEGENVGAADEGVHVDDDDSFGKDSHDLRGFDELEGEAWKKFSYDDYPAAGSPEEPEWIHTPWCGTNSGDIPVLDKVSDKKVLDSDGTPMVQLVLPASTASAPPSSSAGRVDGNTATQPVVRGGGASEGFGDGEDKGVIAEHK--RDVG----------SPRSGAEGGADKGRPCSATGELFTGDAAAAVSP-LSFAGEGAERDSQVD------GGGSGRSPGSVGDGFTSPRALAGGGELRRYNWLGADAAPTKPSLLTTSRIPTGNRADKQRFRNAK 579          
BLAST of mRNA_H-elongata_contig1873.5105.1 vs. uniprot
Match: A0A836CD74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD74_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.620e-78
Identity = 143/244 (58.61%), Postives = 181/244 (74.18%), Query Frame = 0
Query:    1 MSKLKKLQKERLIVARLGFPDKAMEIDGVIEKIRADLRKERQKKDAKILDLALGKLAMEHRRKLTELEIELERDAKSKREAFRREKNILLRKQESQFARLVDDAIKRAIGKSKSCSCSKTYLCHHNKTASFNTRRPKKEVLHFRKNAKRLRHGGRLEESTAWEEKAAELDAEHLDKWREKVAASLSASAWGGSSSALDQLASQHEREVRRMETAQANERTLMLMRHHTLRRNCDNVIMVEQKKL 244
            MSKLKKLQKERLIVARLGFP+KAMEID +++KIR DL+ ER  +D ++L + L +L   H  +   LE  +  + +  R  F  E+  L +K +S+F  LV  A KRAIG+SKSCSC+K YLC HNKTAS+NTRRPKK+V+H+R+NA RL+HGGRLEE+ AWEEKAAELDA HL++WRE VA SL+ASAWGGSSSALD L  +H+ E+ ++E  Q+N   LM M H  LRRN  N + VE KK+
Sbjct:   77 MSKLKKLQKERLIVARLGFPEKAMEIDEMVQKIRDDLKTERAAEDERVLMVELERLQEAHAARAEALEQRIGEEEQQMRGKFCEEQRRLRKKHDSEFLDLVTAATKRAIGRSKSCSCTKKYLCTHNKTASYNTRRPKKDVIHYRRNASRLKHGGRLEEAKAWEEKAAELDARHLEQWREHVARSLAASAWGGSSSALDHLGERHQHELEQLEVGQSNRWRLMTMHHAVLRRNLGNTMAVEVKKV 320          
BLAST of mRNA_H-elongata_contig1873.5105.1 vs. uniprot
Match: A0A6C0BWQ3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BWQ3_9ZZZZ)

HSP 1 Score: 141 bits (355), Expect = 1.650e-32
Identity = 84/250 (33.60%), Postives = 146/250 (58.40%), Query Frame = 0
Query:    1 MSKLKKLQKERLIVARLGFPDKAMEIDGVIEKIRADLRKERQKKDAKILDLALGKLAMEHRRKLTELEIELERDAKSKREAFRREKNILLRKQESQFARLVDDAIKRAIGKSKSCSCSKTYLCHHNKTASFNTRRPKKEVLHFRKNAKRLRHGGRLEESTAWEEKAAELDAEHLDKWREKVAASLSASAWGGSSSALDQLASQHEREVRRMETAQANERTLMLMRHHTLRRNCDNVIMVEQKKLRTACKK 250
            +S LKKLQKERLI++RLGF +KA  +D  IE +R   +  R+ ++ K++   L  L  ++ RK   L+  ++++               + K  ++F +++++A +++IGK KSC+C   YLCHHNKT+S+N R+PK  V+ +RKN+KRL+ GGR E++   EEKA E+D E   +W++ +A S+  S W  +   +D+    H++E+  ME     +R     R    +    N ++ ++++L+   K+
Sbjct:   73 ISALKKLQKERLIISRLGFAEKAYALDKQIEVMREKAKVVRKAEEEKLMAEMLETLHKKNERKQQRLDAVIKQEHDEXXXXXXXXXXXXIEKHRTEFLKIIENAERKSIGKIKSCNCENDYLCHHNKTSSWNIRKPKPIVILYRKNSKRLKQGGRTEDAIQIEEKADEIDYESQIEWKKNIATSIVQSPWNANEPIIDRTIENHKKELETMEKTHEFKRNAFKERCSRRKFALHNNLITDERRLKIKAKR 322          
BLAST of mRNA_H-elongata_contig1873.5105.1 vs. uniprot
Match: A0A836CAU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU2_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.870e-32
Identity = 94/270 (34.81%), Postives = 153/270 (56.67%), Query Frame = 0
Query:    4 LKKLQKERLIVARLGFPDKAMEIDGVIEKIRADLRKERQKKDAKILDLALGKL-------AMEHRRKLTELEIELERDAKSKREAFRREKNILLRKQESQFARLVDDAIKRAIGKSKSCSCSKTYLCHHNKTASFNTRRPKKEVLHFRKNAKRLRHGGRLEESTAWEEKAAELDAEHLDKWREKVAASLSASAWGGSSSALDQLASQHEREVRRMETAQANERTLMLMRHHTLRRNCDNVIMVEQKKLRTACKKDAEERHRREMLRAQAD 266
            +++LQ ERL +AR+GF DKA E++ VIE+ R  + KER++++  IL   L  L       AM HRR+L  LE  L R+ +       +E +    K   ++  L+++  +RA G   SC C K YLC HNKTAS+NTR+P ++V+  R+NA+RLR  GR+EE+  ++ +A  +D +    WR +V  S+ +SAW G  S L+QL  + + ++R +E     +  L+  +              E+KK+   C++ A +R  R+ ++ +AD
Sbjct:   33 IRELQMERLAMARMGFLDKAKEVENVIERERVTMLKEREEREQSILSQKLSSLGKYHHAKAMGHRRRLVALESRLTRELQQFLGKCAKELSDTKDKHRREYEALIEETAQRAYGGVSSCQCRKRYLCRHNKTASYNTRKPTRDVISLRQNAERLRATGRIEEAEEFDRQAQAIDDKADKDWRTRVEQSIVSSAWSGGKSRLEQLVERQQHQLRSVEETHEAKLELVKKQQEIXXXXXXXXXXXERKKVIMYCRRAALKRMTRD-IKEEAD 301          
BLAST of mRNA_H-elongata_contig1873.5105.1 vs. uniprot
Match: A0A6H5JNT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT6_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 1.300e-31
Identity = 115/334 (34.43%), Postives = 171/334 (51.20%), Query Frame = 0
Query:    4 LKKLQKERLIVARLGFPDKAMEIDGVIEKIRADLRKERQKKDAKILDLALGKLAMEHRRKLTELEIELERDAKSKREAFRREKNILLRKQESQFARLVDDAIKRAIGKSKSCSCSKTYLCHHNKTASFNTRRPKKEVLHFRKNAKRLRHGGRLEESTAWEEKAAELDAEHLDKWREKVAASLS--------------ASAWGGSSSALDQLASQHEREVRRMETAQANERTLMLMRHHTLRRNCDNVIMVEQKKLRTACKKDAEERHRREMLRAQADIEEGTPTRRQKWPASAGSDRCAIEDKLEDYIN---REELV--EAVGRSPVRPRSAPP 318
            L++LQ ERL +AR+GF DKA E++  IE  R   +KER++K+  IL   LG L + HRR+   LE +        R         L  K + ++  L+++  +RA G   SC C KTYLC HNKTAS+NTR+P +EV+  R+NA+RLR  GR+EE+  +E +A +LD     +WR +V                    SAW G  S L+QL  + +  V+ +E     +  L++ +    RRN  +    E+KK+   C++ A +R  R+ ++  AD E  T   +     S G D   + +  +  I+   RE LV   A GR      SAPP
Sbjct:   79 LRELQMERLAMARMGFLDKAREVEVWIESERLKTQKEREEKEQAILAQKLGGLDISHRRRFIGLENKQGEGEAQFRAKXXXXXXELRLKHKREYDMLIEETAQRAYGGVSSCQCEKTYLCRHNKTASYNTRKPTREVIRLRQNAERLRATGRVEEAEEFEIQAQDLDDACDKQWRTRVEQRAKPYACSFLHRTSLWRTSAWSGGKSRLEQLVEKQQHTVKSLEETHEAKYELLVKQQDIQRRNLKSTFEAERKKVAMYCRRAALKRMTRD-IKEDADEERRTMANK-----SDGMDNVFLGNARQGAIHTSIRELLVYLSAEGREHDELASAPP 406          
BLAST of mRNA_H-elongata_contig1873.5105.1 vs. uniprot
Match: D8LM25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM25_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.670e-26
Identity = 82/247 (33.20%), Postives = 137/247 (55.47%), Query Frame = 0
Query:   14 VARLGFPDKAMEIDGVIEKIRADLRKERQKKDAKILDLALGKLAMEHRRKLTELEIELERDAKSKREAFRREKNILLRKQESQFARLVDDAIKRAIGKSKSCSCSKTYLCHHNKTASFNTRRPKKEVLHFRKNAKRLRHGGRLEESTAWEEKAAELDAEHLDKWREKVAASLSASAWGGSSSALDQLASQHEREVRRMETAQANERTLMLMRHHTLRRNCDNVIMVEQKKLRTACKKDAEERHRREM 260
            +AR+GF DKA E+D ++E  RA L+KER ++D  +LD  +  L M H R+   +    E    S  E    E   L  KQ+ ++  LV +   RA G   SC C+  + C HNK+AS+NTR+P K+V+  R+N +RLR  GRL E+   +  A  ++    D+WR++V  S+ +SAW G  S L+Q+  + +  +R + +    +   +  +    RRN  + +  E+KK+   C+++A +R  +++
Sbjct:    1 MARMGFLDKAEELDVMVEAERARLKKERDQQDQAVLDQKMNGLRMSHTRRSAAMTSAHEARIASLLEKCATEIEDLKVKQKKEYDVLVGETATRATGGVSSCVCTDPFKCRHNKSASYNTRKPTKDVIRLRQNGQRLRASGRLAEADEVDNMAVAIEKLAEDQWRKRVEESILSSAWCGGKSRLEQMVERQQATLRALMSTHTEKLARLKQQDRLERRNLVSTLAAERKKVILYCRREATKRRTKDI 247          
BLAST of mRNA_H-elongata_contig1873.5105.1 vs. uniprot
Match: A0A835Z9J4_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9J4_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.370e-12
Identity = 56/183 (30.60%), Postives = 86/183 (46.99%), Query Frame = 0
Query:   92 KQESQFARLVDDAIKRAIGKSKSCSCSKTYLCHHNKTASFNTRRPKKEVLHFRKNAKRLRHGGRLEESTA--------------------------------WEEKAAELDAEHLDKWREKVAASLSASAWGGSSSALDQLASQHEREVRRMETAQANERTLMLMRHHTLRRNCDNVIMVEQK 242
            KQ+ Q+  LV +   RA G   SC+C+  Y C HNK+AS++TR+P ++V+  R+NA+RLR  GR EE+ +                                 E KAA+ +      WR +V A++ +SAW G  S L+Q+  + +  V  +E        L    H  LRRN    +  E++
Sbjct:  300 KQKRQYELLVGETATRATGGISSCTCADAYACRHNKSASYSTRKPTRDVIRLRQNAQRLRASGRQEEAESRGRRGLGGSEAPECARAAGERKCGGAHLLACEMENKAADAERAAEAAWRARVEAAIVSSAWAGGKSRLEQMVERQQAVVAALEETHGERAALARKNHGILRRNLLATLNAERR 482          
BLAST of mRNA_H-elongata_contig1873.5105.1 vs. uniprot
Match: A0A6H5KND4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KND4_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 7.500e-8
Identity = 59/229 (25.76%), Postives = 101/229 (44.10%), Query Frame = 0
Query:  101 VDDAIKRAIGKSKSCSCSKTYLCHHNKTASFNTRRPKKEVLHFRKNAKRLRHG---------------------GRLEESTAWEEKAAELDAEHLDKWREKVAASLSASAWGGSSSALDQLASQHEREVRRMETAQANERTLML----MRHHTLRRNCDNVIMVEQKKLRTACKKDAEERHRREMLR----AQADIEEGTPTRRQKW--PASAGSDRCAIEDKLEDYIN 298
            V +   RA G   SC C+  + C HNK+AS+NTR+P K+V+  R+N  R RH                      GRL E+   +  A  ++    ++WR++V  S+ +SAW G  S L+Q+  + +  ++ + +    +   +     +R  T RR  D     ++ +   A K D  +   + M +    +Q+DI+     R + W  P + G D        ED  +
Sbjct:   60 VGETATRATGGVSSCVCTDPFKCRHNKSASYNTRKPTKDVIRLRQNVSRPRHSPAEPPLMWLFFVSRGQRLRASGRLAEADEVDNMAVAIEKLAEEQWRKRVEESILSSAWCGGKSRLEQMVERQQATLQALMSTHTEKLARLKQQDRLREATKRRTKDIAAGAKEARKLNAHKSDGMQNVSKNMFKDSDDSQSDID-SEDDRLEGWKPPTACGVDNSKALSSYEDIAS 287          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1873.5105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G884_ECTSI1.520e-13549.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CD74_9STRA1.620e-7858.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6C0BWQ3_9ZZZZ1.650e-3233.60Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A836CAU2_9STRA1.870e-3234.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JNT6_9PHAE1.300e-3134.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM25_ECTSI1.670e-2633.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z9J4_9STRA1.370e-1230.60SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5KND4_9PHAE7.500e-825.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 197..217
NoneNo IPR availableCOILSCoilCoilcoord: 57..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1873contigH-elongata_contig1873:8261..13228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1873.5105.1mRNA_H-elongata_contig1873.5105.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1873 8261..13234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1873.5105.1 ID=prot_H-elongata_contig1873.5105.1|Name=mRNA_H-elongata_contig1873.5105.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=599bp
MSKLKKLQKERLIVARLGFPDKAMEIDGVIEKIRADLRKERQKKDAKILD
LALGKLAMEHRRKLTELEIELERDAKSKREAFRREKNILLRKQESQFARL
VDDAIKRAIGKSKSCSCSKTYLCHHNKTASFNTRRPKKEVLHFRKNAKRL
RHGGRLEESTAWEEKAAELDAEHLDKWREKVAASLSASAWGGSSSALDQL
ASQHEREVRRMETAQANERTLMLMRHHTLRRNCDNVIMVEQKKLRTACKK
DAEERHRREMLRAQADIEEGTPTRRQKWPASAGSDRCAIEDKLEDYINRE
ELVEAVGRSPVRPRSAPPVRGKRPQLNARGEDTVAAEGARGDGNRGGGNE
NEDHDSTGGSSRDLEGFGELEGAFSYDDYPVAGSLGEPEWVHVPWLGSDS
CCSAGADRRISDTPTTTPPFSGIKDGAITEEGGNISDDQGGEGGVVALEN
EGGRDVVGVNNMGWLEWSGYSASEARLAAAAELEKSSELTGSAVGTNTPA
IISAREGREDRTPLSTGVAAGGGKRSREKGSVSPGRNGEGGEDLKRYDWD
INKVPERPSLLVTSRIPSGSRINKTKARKARNNNPGGKKVTVVCYGSV*
back to top