prot_H-elongata_contig106255.510.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig106255.510.1
Unique Nameprot_H-elongata_contig106255.510.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig106255.510.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 123 bits (308), Expect = 1.380e-29
Identity = 59/155 (38.06%), Postives = 96/155 (61.94%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQLKGIHYEKSSSPTPAQANIRMILSMIAALSWEARQLDVGMAYLEAEVEEEIYVDLPEAYRVSRKQAGLLKKAMYGLVHAGLLW 155
            + EAQAS EWP+W++A+  E D     G W++ + P  +  +G + VF+RK +K+G++ KYK RLVAQG+ Q+ G+ + ++ +P     +IR IL++    +WE  Q+DV  AYL  +++EEIY+  PE +     +   L+K +YGL  +G  W
Sbjct:  910 LAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREW 1064          
BLAST of mRNA_H-elongata_contig106255.510.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 123 bits (308), Expect = 1.380e-29
Identity = 64/154 (41.56%), Postives = 96/154 (62.34%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQLKGIHYEKSSSPTPAQANIRMILSMIAALSWEARQLDVGMAYLEAEVEEEIYVDLPEAYRVSRKQAGL--LKKAMYGLVHAG 152
            + EA  S+EWP+WK AIA+EM    + G + +VE P    ++G++ VF+ K + +G IE YK RLVAQGF Q+ GI + ++ +P    A+IR+IL++ A   WE  Q+DV  AYL  ++EEEIY+  P       K+  +  LK+ +YGL  +G
Sbjct:  925 LNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSG 1078          
BLAST of mRNA_H-elongata_contig106255.510.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 122 bits (305), Expect = 1.820e-29
Identity = 64/155 (41.29%), Postives = 92/155 (59.35%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQLKGIHYEKSSSPTPAQANIRMILSMIAALSWEARQLDVGMAYLEAEVEEEIYVDLPEAYRVSRKQAGL--LKKAMYGLVHAGLLW 155
            EA+AS EWPQW+ AI  E+      G W++ E+P G  V+G+  VFK K D  G I KYK RLVAQGF Q+ G+ Y  + +P    ++IR++ ++ A   WE  Q+DV  AYL  ++EEEI++  P  +    ++  +  L K +YGL  AG  W
Sbjct:   35 EAKASGEWPQWEAAIEDELGRMKKMGTWELAEKPPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRW 189          
BLAST of mRNA_H-elongata_contig106255.510.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 121 bits (304), Expect = 4.770e-29
Identity = 60/153 (39.22%), Postives = 95/153 (62.09%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQLKGIHYEKSSSPTPAQANIRMILSMIAALSWEARQLDVGMAYLEAEVEEEIYVDLPEAYRVSRKQAGLLKKAMYGLVHAGLLW 155
            +A +  +  +W++A   E++     GV++ V RP  + ++G++ VFK K   DG++EKYK RLVAQGF Q++GI Y ++ +P     +IR++L++ A   WE  Q+DV  A+L  E+EEEIY+ +P  ++ S      LKKA+YGL  A   W
Sbjct: 1000 DAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREW 1152          
BLAST of mRNA_H-elongata_contig106255.510.1 vs. uniprot
Match: A0A5N6P275_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P275_9ASTR)

HSP 1 Score: 120 bits (300), Expect = 6.140e-29
Identity = 65/155 (41.94%), Postives = 94/155 (60.65%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQLKGIHYEKSSSPTPAQANIRMILSMIAALSWEARQLDVGMAYLEAEVEEEIYVDLPEAYRVSRKQAGLLK--KAMYGLVHAGLLW 155
            +A  SSE PQWK AI  E+D       W++V+ P G   LG R +FKRK+  DG I+KYK RLV +GFRQ +G+ Y  S SP     +IR++L++ A  + E  Q+DV  A+L  ++EEEIY++ PE +    ++  + K  K++YGL  A   W
Sbjct:  290 DAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDSYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSAPGQEGKVCKLVKSLYGLKQAPKQW 444          
BLAST of mRNA_H-elongata_contig106255.510.1 vs. uniprot
Match: A0A1M2V8C6_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V8C6_TRAPU)

HSP 1 Score: 121 bits (303), Expect = 6.520e-29
Identity = 63/155 (40.65%), Postives = 97/155 (62.58%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQLKGIHYEKSSSPTPAQANIRMILSMIAALSWEARQLDVGMAYLEAEVEEEIYVDLPEAYRVSRKQAGL--LKKAMYGLVHAGLLW 155
            EAQ + +WP+W+ AI  EMD   A   + +V RP G  V+G+R+VF RK D DG I++ K R+VAQGF Q+ G+ Y ++ +P    +++R++L++ A  SW   QLDV  AYL  +++EEIY+  P       ++  +  L+K++YGL  AG  W
Sbjct:  993 EAQEAPDWPKWEEAITVEMDNLRAHSTYDLVVRPVGAHVIGSRLVFHRKRDADGSIKQCKVRVVAQGFGQIPGVDYNETFAPVAKSSSLRIMLALAARFSWPLIQLDVKSAYLNGDLDEEIYMRQPPGTAAQGEEHLVCRLRKSLYGLKQAGRAW 1147          
BLAST of mRNA_H-elongata_contig106255.510.1 vs. uniprot
Match: A0A5N6PKD3_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PKD3_9ASTR)

HSP 1 Score: 120 bits (302), Expect = 8.220e-29
Identity = 65/155 (41.94%), Postives = 95/155 (61.29%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQLKGIHYEKSSSPTPAQANIRMILSMIAALSWEARQLDVGMAYLEAEVEEEIYVDLPEAYRVSRKQAGLLK--KAMYGLVHAGLLW 155
            EA  SSE PQWK AI  E+D      +W++V+ P G   LG R +FKRK+  DG I+KYK RLV +GFRQ +G+ Y  + SP     +IR++L++ A  + E  Q+DV  A+L  ++EEEIY++ PE +    ++  + K  K++YGL  A   W
Sbjct:  297 EAVTSSEGPQWKEAIKNEIDSILQNHIWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSAPGQEGKVCKLVKSLYGLKQAPKQW 451          
BLAST of mRNA_H-elongata_contig106255.510.1 vs. uniprot
Match: A0A151RGT1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RGT1_CAJCA)

HSP 1 Score: 115 bits (288), Expect = 8.520e-29
Identity = 54/145 (37.24%), Postives = 88/145 (60.69%), Query Frame = 0
Query:   13 WKRAIAREMDGQTARGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQLKGIHYEKSSSPTPAQANIRMILSMIAALSWEARQLDVGMAYLEAEVEEEIYVDLPEAYRVS--RKQAGLLKKAMYGLVHAGLLW 155
            W +A+  EM+       W++V++P  K  +G R +F  K   DG IE+YK RLVA+G+ Q  GI Y+++ +P      +R++L++ A   W+  QLDV  A+L   +EEE+Y+++P+ ++V   R +  LLKKA+YGL  +   W
Sbjct:    6 WTQAMKEEMNALERNSTWEIVDKPRDKKAIGCRWIFTVKHKADGTIERYKARLVAKGYTQTYGIDYKETFAPVAKMNTVRVVLALTAHFGWDLHQLDVKSAFLHGNLEEEVYMEIPQGFKVQNERNKVCLLKKALYGLTQSLRAW 150          
BLAST of mRNA_H-elongata_contig106255.510.1 vs. uniprot
Match: A0A5R9QKQ6_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Labilibacter sediminis TaxID=2570926 RepID=A0A5R9QKQ6_9BACT)

HSP 1 Score: 117 bits (293), Expect = 1.210e-28
Identity = 65/155 (41.94%), Postives = 94/155 (60.65%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQLKGIHYEKSSSPTPAQANIRMILSMIAALSWEARQLDVGMAYLEAEVEEEIYVDLPEAYRVSRKQAGLLK--KAMYGLVHAGLLW 155
            EA  SSE PQWK AI  E++       W++V+ P G   LG R +FKRK+  DG I+KYK RLV +G+RQ +G+ Y  + SP     +IRM+L++ A  + +  Q+DV  A+L  E+EEEIY++ PE +  S  +  + K  K++YGL  A   W
Sbjct:   35 EAVNSSEGPQWKEAIKSEIESILQNHTWELVDLPPGSKPLGYRWIFKRKMKADGSIDKYKARLVVKGYRQKEGLDYFDTYSPVTRITSIRMVLAIAAIRNLQIHQMDVKTAFLNGELEEEIYMEQPEGFVASGYENKVCKLVKSLYGLKQAPKQW 189          
BLAST of mRNA_H-elongata_contig106255.510.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI)

HSP 1 Score: 120 bits (300), Expect = 1.640e-28
Identity = 61/153 (39.87%), Postives = 91/153 (59.48%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAREMDGQTARGVWQVVERPNGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQLKGIHYEKSSSPTPAQANIRMILSMIAALSWEARQLDVGMAYLEAEVEEEIYVDLPEAYRVSRKQAGLLKKAMYGLVHAGLLW 155
            EA+   +WP W+ AI +E+   +  G W + + P G+  +G++ VFK K+  DG ++KYK RLVAQGF Q  G+ Y+++ +P    A +R+++++ A   W A Q+DV  AYL   +EEEIY+  P  Y    K   L K A+YGL  AG  W
Sbjct:  835 EAKRRPDWPHWETAIKKELASLSENGTWTLEDLPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLEEEIYMRAPPGYAEGDKVCRLCK-ALYGLKQAGRTW 986          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106255.510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GYH9_9APHY1.380e-2938.06Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A401GN13_9APHY1.380e-2941.56Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A4Y9ZVS1_9AGAM1.820e-2941.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C2WN23_AMAMK4.770e-2939.22Integrase catalytic domain-containing protein (Fra... [more]
A0A5N6P275_9ASTR6.140e-2941.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A1M2V8C6_TRAPU6.520e-2940.65Retrovirus-related Pol polyprotein from transposon... [more]
A0A5N6PKD3_9ASTR8.220e-2941.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A151RGT1_CAJCA8.520e-2937.24Retrovirus-related Pol polyprotein from transposon... [more]
A0A5R9QKQ6_9BACT1.210e-2841.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5C3E5T1_9BASI1.640e-2839.87Uncharacterized protein n=2 Tax=Ustilago trichopho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..155
e-value: 5.1E-30
score: 104.9
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 7..148
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 7..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig106255contigH-elongata_contig106255:1555..2022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig106255.510.1mRNA_H-elongata_contig106255.510.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig106255 1531..2022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig106255.510.1 ID=prot_H-elongata_contig106255.510.1|Name=mRNA_H-elongata_contig106255.510.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPNGKTVLGTRVVFKR
KIDKDGRIEKYKCRLVAQGFRQLKGIHYEKSSSPTPAQANIRMILSMIAA
LSWEARQLDVGMAYLEAEVEEEIYVDLPEAYRVSRKQAGLLKKAMYGLVH
AGLLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like