mRNA_H-elongata_contig18719.5102.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18719.5102.1 vs. uniprot
Match: A0A6H5JI56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE) HSP 1 Score: 385 bits (989), Expect = 2.090e-112 Identity = 223/526 (42.40%), Postives = 307/526 (58.37%), Query Frame = 1
Query: 13 NLARRVKLPVGAPTIYAWHVERGAVIATLCDRLGVTYSSGE-ASAEPPLVGLAGPPGSGKSIAASMIIAQEDIREHFF-KGVVWLPVGPGAKDRLRVLMYRLADMIYETTLGLKG-------RSPQTPDIGVDAEDGATYIREVVGIDSRR--------LLIVADDVWEVEVLRELRSTGASVLYTTRSEH----ISIEFPPLRLDAVSHHEAETVLRRAAEVDGKDPLPKMAYYIIERCGPSIMDLVYVGRWSAVRKRVDREAWQNHINRIFDAQRGVEDRTIPLVLWRTGLLRAGLDELACDGDQTRALYLSLAVIPKRVIFRLEDAVALLHDGTCDLEDLEKVRRIMATFERMAIVARQVGGLYRMHDVQADFVRTVITDYPSTHDTAHAHWVKHVSTAKALFAWPLDALVDIWRSVERSREGVETT----PYDTALQKIDVSDPRLPKVLRRVAYFYWLAGYHDAACATWVKLLAIEGSIRVNDEFPNLARTQFELGLYQKNAGRINEAGAWFRQALLVQEE 1515
L + K P AP + W ++R V+A +CDRLGV G AS EPP+VG+AGP G+GKS ASMIIA+ D+R HF K +VWLPVG GA+DRL +MYRLA M++E + R PQ PDIGV+ EDGA Y+RE++ D LL+VADD+WE EVL ELRSTGAS+LYTTRSE S LR+D V+ EAE +LRRAA++ LP A+ II R GP MD+ YVGRW VR D+ AW + + DAQ ++ L+ WR+ +LR GL L T+ LYLSL V+P+ + F + D AL+ DG+ E+L+ + T E+ +++ R GG YR+H AD I++ P+T +A A W VSTA+A+ AW + LVDIW+++ G PY + +++SD ++LRR+A+F W+ DAAC +W KLLA ND P++ + LG + +GR +EA WFR+ L ++E+
Sbjct: 297 RLYSKAKGPAEAPLLQDWFIQREPVVAAICDRLGVNDRGGSRASGEPPVVGVAGPSGAGKSTIASMIIARNDVRGHFSEKRIVWLPVGQGARDRLLDVMYRLAVMVHELVVNSSSFPDDGPFRPPQPPDIGVEPEDGAAYVREILTADEGERSSGGFGELLVVADDIWEAEVLAELRSTGASILYTTRSEEDLLAASGGSDVLRVDEVTEGEAEEILRRAADLLDHTKLPDAAHDIIRRGGPVAMDVAYVGRWDIVRGNNDQAAWAVVLAHVIDAQNFMKGAA--LLPWRSAVLRVGLTRLGLADQGTKELYLSLGVLPRNLSFSVGDVTALVSDGSA--EELQAATLAITTLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPATLGSALARWRNRVSTAEAVLAWRTEELVDIWQAIWSLEIGEGAAEIGQPYSEIVDAMNLSDAGAFQLLRRIAFFQWMTNEPDAACMSWSKLLASGEDSAAND--PDVHAIMYTLGAHALVSGRTHEAEGWFRRTLAIEEK 816
BLAST of mRNA_H-elongata_contig18719.5102.1 vs. uniprot
Match: D8LT49_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI) HSP 1 Score: 378 bits (970), Expect = 5.300e-110 Identity = 223/519 (42.97%), Postives = 302/519 (58.19%), Query Frame = 1
Query: 31 KLPVGAPTIYAWHVERGAVIATLCDRLGVT-YSSGEASAEPPLVGLAGPPGSGKSIAASMIIAQEDIREHFF-KGVVWLPVGPGAKDRLRVLMYRLADMIYETTLGLKG------RSPQTPDIGVDAEDGATYIREVVGIDSRR--------LLIVADDVWEVEVLRELRSTGASVLYTTRSEH----ISIEFPPLRLDAVSHHEAETVLRRAAEVDGKDPLPKMAYYIIERCGPSIMDLVYVGRWSAVRKRVDREAWQNHINRIFDAQRGVEDRTIPLVLWRTGLLRAGLDELACDGDQTRALYLSLAVIPKRVIFRLEDAVALLHDGTCDLEDLEKVRRIMATFERMAIVARQVGGLYRMHDVQADFVRTVITDYPSTHDTAHAHWVKHVSTAKALFAWPLDALVDIWRSVERSR--EGVETT--PYDTALQKIDVSDPRLPKVLRRVAYFYWLAGYHDAACATWVKLLAIEGSIRVNDEFPNLARTQFELGLYQKNAGRINEAGAWFRQALLVQEE 1515
K P AP + W ++R V+A +CDRLGV AS EPP+VG+AGP G+GKS ASMI+A+ D+R HF KGVVWL VG GA+DRL +MYRLA M++E R P+TPDIGV+ EDGA Y+RE++ D LL+VADDVWE EVL ELR+TGAS+LYTTRSE S LR+D V+ EAE +LRRAA + LP A+ II R G MD+ YVGRW VR + D+ AW + + DAQ ++ L+ WR+ +LR G+ L T+ LYLSL V+P+ + F ++D AL+ DG+ E+L+ MAT E+ +++ R GG YR+H AD I++ P+ A A W VSTA+A+ W + LVDIW ++ EG E PY + +D+SD ++LRR+A+F WL DAAC +W KLLA N P++ T + LG + +GR EA WFR+ L ++E+
Sbjct: 259 KSPAEAPLLQDWFIQREPVVAAICDRLGVNDRGRSRASGEPPVVGVAGPSGAGKSTIASMIVARHDVRGHFSQKGVVWLSVGQGARDRLLDVMYRLAVMVHELADSSSSPDDGPFRPPRTPDIGVEPEDGAAYVREILAADEGERSSGGFGELLVVADDVWEAEVLAELRNTGASILYTTRSEEDLLAASGGSSVLRVDEVTEGEAEELLRRAAALLDYSKLPDAAHDIIRRGGSVAMDVAYVGRWDIVRGKNDQAAWAAVLAHVIDAQNFMKGAA--LLPWRSAVLRVGVTRLGLADQGTKELYLSLGVLPRNLSFSVDDVTALVSDGSA--EELQAATLAMATLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPAILGPALARWRNRVSTAEAVLTWRTEELVDIWETIWSLEIGEGAEDIGQPYAETVDAMDLSDAGAFQLLRRIAFFQWLTNEPDAACMSWSKLLASGEDSAANH--PDVHVTMYTLGAHALISGRTPEAEGWFRRTLAIEEK 771
BLAST of mRNA_H-elongata_contig18719.5102.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE) HSP 1 Score: 362 bits (930), Expect = 1.120e-107 Identity = 211/504 (41.87%), Postives = 285/504 (56.55%), Query Frame = 1
Query: 10 SNLARRVKLPVGAPTIYAWHVERGAVIATLCDRLGVTYSSGEASAEPPLVGLAGPPGSGKSIAASMIIAQEDIREHFFKGVVWLPVGPGAKDRLRVLMYRLADMIYETTLGLKGRSPQTPDIGVDAEDGATYIREVVGIDSRRLLIVADDVWEVEVLRELRSTGASVLYTTRSEHISIEFPPLRLDAVSHHEAETVLRRAAEVDGKDPLPKMAYYIIERCGPSIMDLVYVGRWSAVRKRVDREAWQNHINRIFDAQ-RGVEDRTIPLVLWRTGLLRAGLDELACDGDQTRALYLSLAVIPKRVIFRLEDAVALLHDGTCDLEDLEKVRRIMATFERMAIVARQVGGLYRMHDVQADFVRTVITDYPSTHDTAHAHWVKHVSTAKALFAWPLDALVDIWRSVERSR-EGVETTPYDTALQKIDVSDPRLPKVLRRVAYFYWLAGYHDAACATWVKLLAIEGSIRVNDEFPNLARTQFELGLYQKNAGRINEAGAWFRQALLVQEE 1515
S A V +P GAP I+ WHVER +A CD LG+ E P +VG++GP GSGKS ASM+IA++D+RE+F+KGV+WLPVG GAK L LM LA M+YET L R P+ +GVD EDGA YI EVV + R L+VADD+ E EVL EL+ G VLYT+R + + P LRLDAV+ E VLRRAA + LP A+ +++RC M L + GRW VR + D EAW+ + I +AQ RG R L+ WR +LR G DEL D T+ LYLSLA++PK + FR + A LL+ C ++LE + + T ER++I+ +V G YR+H+V ADFVR + A A W + S +AL + LV IW + + G +PYD AL ++D S P+L K L+R A F+W A +L IE + +A+T LG+ AGR EA +++AL + E
Sbjct: 116 SQSAGEVAVPSGAPRIHEWHVERKEAVAEACDSLGIGSGKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADDIREPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQRCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNGR---LLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSADELEAAGKALETLERLSILTLEVSGKYRVHEVHADFVRECEVANNEEREMALARWRGYASDLRALSTYSSAWLVKIWDVIAQLEGTGPVASPYDAALDRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALTIFRE 616
BLAST of mRNA_H-elongata_contig18719.5102.1 vs. uniprot
Match: A0A6H5KXU5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE) HSP 1 Score: 324 bits (830), Expect = 9.690e-94 Identity = 199/500 (39.80%), Postives = 280/500 (56.00%), Query Frame = 1
Query: 25 RVKLPVGAPTIYAWHVERGAVIATLCDRLGVTYSSGEAS---AEPPLVGLAGPPGSGKSIAASMIIAQEDIREHFFKGVVWLPVGPGAKDRLRVLMYRLADMIYETTLGLKGRSPQTPDIGVDAEDGATYIREVVGIDSRRLLIVADDVWEVEVLRELRSTGASVLYTTRSEHISIEFPPLRLDAVSHHEAETVLRRAAEVDGKDPLPKMAYYIIERCGPSIMDLVYVGRWSAVRKRVDREAWQNHINRIFDAQRGVEDRTIPLVLWRTGLLRAGLDELACDGDQTRALYLSLAVIPKRVIFRLEDAVALLHDGTCDLEDLEKVRRIMATFERMAIVA-RQVGGLYRMHDVQADFV--RTVITDYPSTHDTAHAHWVKHVSTAKALFAWPLDALVDIWRSVERSR-EGVETTPYDTALQKI-DVSDPRLPKVLRRVAYFYWLAGYHDAACATWVKLLAIEGSIRVNDEFPNLARTQFELGLYQKNAGRINEAGAWFRQAL 1500
RV +P GAP+I W+VER V A +C LG+ S+G S +P +VGLAGP G+GKS ASM++ Q D++ F V+WL VG GAKDRL LM+ LA + ET L R P+ +G+++EDGA YIRE G R L+VADDVW+ EVL ELR GA V+YTTR + E P +RL+ V EAE +LRRAA++ K LP AY ++ RC S++DL VGRW +R R AW+ ++ I + QR D L+ WR +LRAGL LA D QT LY +LA++P + F E A+ LL+ L+ ++ T ER++I+ + G Y +H+ DFV R + Y T DTA W +++S+ +AL + L +W + + EG +PY+ AL I D S+ L + LRR A F++ G A + +LL I+ D P++A+ LG+ GR E + R+AL
Sbjct: 172 RVNIPSGAPSIRDWYVERVKVEAQICHHLGIGTSNGIPSFPEEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPTLMFELAKTVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKAELFPETPAIRLEEVLEEEAEMMLRRAADLGEKTRLPPAAYELMRRCDFSVLDLALVGRWGKIRGRSCERAWRAALDSIIETQRAGGDGG-QLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHY--TRDTALPRWRQYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSEGELLEALRRAAEFHFCRGDWSEAFDKYSELLLIKEQTAGPDH-PDVAKILHNLGMCACEVGREKETEGYLRRAL 667
BLAST of mRNA_H-elongata_contig18719.5102.1 vs. uniprot
Match: D7G5Y4_ECTSI (NB-ARC and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI) HSP 1 Score: 316 bits (810), Expect = 1.210e-92 Identity = 193/500 (38.60%), Postives = 278/500 (55.60%), Query Frame = 1
Query: 25 RVKLPVGAPTIYAWHVERGAVIATLCDRLGVTYSSGEAS---AEPPLVGLAGPPGSGKSIAASMIIAQEDIREHFFKGVVWLPVGPGAKDRLRVLMYRLADMIYETTLGLKGRSPQTPDIGVDAEDGATYIREVVGIDSRRLLIVADDVWEVEVLRELRSTGASVLYTTRSEHISIEFPPLRLDAVSHHEAETVLRRAAEVDGKDPLPKMAYYIIERCGPSIMDLVYVGRWSAVRKRVDREAWQNHINRIFDAQRGVEDRTIPLVLWRTGLLRAGLDELACDGDQTRALYLSLAVIPKRVIFRLEDAVALLHDGTCDLEDLEKVRRIMATFERMAIVA-RQVGGLYRMHDVQADFV--RTVITDYPSTHDTAHAHWVKHVSTAKALFAWPLDALVDIWRSVERSR-EGVETTPYDTALQKI-DVSDPRLPKVLRRVAYFYWLAGYHDAACATWVKLLAIEGSIRVNDEFPNLARTQFELGLYQKNAGRINEAGAWFRQAL 1500
RV +P GAP+I W+VER V +C LG+ S+G S +P +VGLAGP G+GKS ASM++ Q D++ F V+WL VG GAKDRL LM+ LA+ + ET L R P+ +G+++EDGA YIRE G R L+VADDVW+ EVL ELR GA V+YTTR + P +RL+ V EAE +LRRAA++ + LP AY +++RC +++DL VGRW +R+R AW+ ++ I + QR D L+ WR +LRAGL LA D QT LY +LA++P + F E A+ LL+ L+ ++ T ER++I+ + G Y +H+ DFV R + Y T DTA W +++S+ +AL + L +W + + EG +PY+ AL I D S+ L + LRR A F++ A + LL I+ P++A+ LG+ GR E + R+AL
Sbjct: 6 RVNIPSGAPSIRDWYVERVGVATQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPALMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLGELRRAGAWVIYTTRKTELFPGTPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCESAWRAALDSIIETQRAGGDGG-QLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHY--TRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLSKVEGEGFVRSPYNAALNAIMDDSEGELLEALRRAAEFHFCREDWSEAFDKYSNLLLIKEQT-AGPHHPDVAKILHNLGMCACEVGREKETEGYLRRAL 501
BLAST of mRNA_H-elongata_contig18719.5102.1 vs. uniprot
Match: A0A6H5JK89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK89_9PHAE) HSP 1 Score: 298 bits (764), Expect = 2.830e-81 Identity = 219/580 (37.76%), Postives = 295/580 (50.86%), Query Frame = 1
Query: 7 VSNLARRVKLPVGAPTIYAWHVERGAVIATLCDRLGVTYSSGEASA----EPPLVGLAGPPGSGKSIAASMIIAQEDIREHFFKGVVWLPV-GPGAKDRLRVLMYRLADMIYETTL--------GLKGRSPQTPD-IGVDAEDGATYIREVVGI---------------DSRR----LLIVADDVWEVEVLRELRSTGASVLYTT------------RSE-------HISIEFPPLRLDAVSHHEAETVLRRAAEVDGKDPLPKMAYYIIERCGPSIMDLVYVGRWSAVRKRVDREAWQNHINRIFDAQRGVEDRTIPLVLWRTGLLRAGLDELACDGDQTRALYLSLAVIPKRVIFRLEDAVALLHDGTCDLE----------DLEKVRRIMATFERMAIVARQVGGLYRMHDVQADFVRTVITDYPSTHDTAHAHWVKHVSTAKALFAWPLDALVDIWRSVERSREGVETTP--YDTALQKIDVSDP-RLPKVLRRVAYFYWLAGYHDAACATWVKLLAIE------------GSIRVNDEFPNLARTQFELGLYQKNAGRINEAGAWFRQALLVQEE 1515
V+ LA +VK+P AP I AW++ R + +C RLGV S EP +VGLAGP G GKS S+++A+ED+R +F G+VWLPV G GA+ RL LM LA+M+YET L K R P+TP + D E+GA YIR +GI + RR LIVADDV+E EVL EL+ GA VLYTT RSE H + LRLD +S E ETVLRRA+ +D + LP+ A +I+ G +MDL Y+GRW VR D +AW+ +N +F + G + W T +L AG+ +LA D+ + LYLSLAV+PK + F DA ALL G D + DL V ++ ER +++ + GG Y MH ADFVR +I+ +P + A W +H ST ALFAWP++ V I ++ + VE+ P YD L +D SD VL RVA LAG + A A + +L+ + SIR LA LG+ G EA A +A ++EE
Sbjct: 232 VAFLASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVGDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETILKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITFPGREEGDGGGGSHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADV----LRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLAYIGRWGVVRGTTDAKAWEAALNSVF-LEGGDGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGDTKATQAAKAATPDLGAVMEVLGVLERCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHTSTPAALFAWPVEDSVRIQWALLSLDDAVESPPPPYDAMLDGMDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVGVTESRLEREAAGGGDSIRQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSIREE 806
BLAST of mRNA_H-elongata_contig18719.5102.1 vs. uniprot
Match: A0A6H5JL31_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE) HSP 1 Score: 290 bits (741), Expect = 4.460e-80 Identity = 201/506 (39.72%), Postives = 271/506 (53.56%), Query Frame = 1
Query: 7 VSNLARRVKLPVGAPTIYAWHVERGAVIATLCDRLGVTYSSGEASAEPPLVGLAGPPGSGKSIAASMIIAQEDIREHFFKGVVWLPVGPGA-KDRLRVLMYRLADMIYETTLGLKGRSPQTPDIGVDAEDGATYIREVVGIDSRRLLIVADDVWEVEVLRELRSTGA-SVLYTTRSEHISIEFPPLRLDAVSHHEAETVLRRAAEVDGKDPLPKMAYYIIERCGPSIMDLVYVGRWSAVRKRVDREAWQNHINRIFDAQRGVEDRTIPLVLWRTGLLRAGLDELACDGDQTRALYLSLAVIPKRVIFRLEDAVALLH-DGTC--DLEDLEKVRRIMATFERMAIVARQVGGLYRMHDVQADFVRTVITDYPSTHDTAHAHWVKHVSTAKALFAWPLDALVDIWRSV-ERSREGVETTPYDTALQKIDVSDPRLPKVLRRVAYFYWLAGYHDAACATWVKLLAIEGSIRVNDEFPNLARTQFELGLYQKNAGRINEAGAWFRQALLV 1506
V++LA V++P AP I VERG VI+ +C LG+ + AE +VGLAG GSGKS ASM+I +ED+R F GV+WL VG A +DRL L+ LA M+YET + R + IG D ED A YI+ + RR L+VADDVW+ EVL ELR VLYT+R+ + P + LD + EAE VLR AAE+ LP+ AY ++ RC + +DL +VGRWS R+R AW+ ++ I DAQ E R +PL WR +L GL+ELA + R LYL+LAVIP+ F + A LL+ DG + ED E+ + I T ER +I+ R GG YR+HD DF+R +T W +++S+ AL D L + W + E E V + PY AL + S P LR A FY A + +LL I+ D +ART ELGL +GR EA ++AL +
Sbjct: 17 VADLASTVRIPTTAPRIRDRFVERGEVISQVCSLLGIEDHTTAYPAEMKVVGLAGAGGSGKSTVASMVIRREDVRAFFPGGVLWLSVGQRAGRDRLLELLTSLAGMVYETVFQKRCRPLRKGVIGTDDEDPAAYIQCLQVERPRRFLVVADDVWQTEVLDELRRASVWGVLYTSRNTDLLPRAPVVLLDQLDREEAEMVLRNAAELAKDACLPEAAYDLMRRCEYAALDLDFVGRWSRTRRRTSELAWRGALDCIVDAQTRGEGR-LPLS-WRAAVLHTGLEELAGENSANRELYLALAVIPRGQPFPPDVAAVLLYGDGRSGEEKEDREEAKNIFETLERWSIITRVGGGWYRVHDEHTDFIRASFAANQHARNTTLIRWRRYMSSVSALVTLSEDWLSEGWNVLAEAQGEPVPSQPYLEALGGLAPSSADRPMALRTAASFYRDREQWMPASDYFSQLLIIQEHTAGVDSVV-VARTLHELGLCVYMSGRAEEAELRLKRALRI 519
BLAST of mRNA_H-elongata_contig18719.5102.1 vs. uniprot
Match: D7G2X0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X0_ECTSI) HSP 1 Score: 263 bits (671), Expect = 4.970e-70 Identity = 197/527 (37.38%), Postives = 266/527 (50.47%), Query Frame = 1
Query: 154 LVGLAGPPGSGKSIAASMIIAQEDIREHFFKGVVWLPV-GPGAKDRLRVLMYRLADMIYETTL--------GLKGRSPQTPD-IGVDAEDGATYIREVVGI---------------DSRR----LLIVADDVWEVEVLRELRSTGASVLYTT------------RSE-----------HISIEFPPLRLDAVSHHEAETVLRRAAEVDGKDPLPKMAYYIIERCGPSIMDLVYVGRWSAVRKRVDREAWQNHINRIF-DAQRGVEDRTIPLVLWRTGLLRAGLDELACDGDQTRALYLSLAVIPKRVIFRLEDAVALLHDGTCDLE-----DLEKVRRIMATFERMAIVARQVGGLYRMHDVQADFVRTVITDYPSTHDTAHAHWVKHVSTAKALFAWPLDALVDIWRSVERSREGVETTP-YDTALQKIDVSDP-RLPKVLRRVAYFYWLAGYHDAACATWVKLLAIEGSIRVNDEFPN-------------LARTQFELGLYQKNAGRINEAGAWFRQALLVQEE 1515
+VGLAGP G GKS S+++A+ED+R HF G+VWLPV G GA+ RL LM LA+M+YET L K R P+TP + D E+GA YIR +GI + RR LIVADDV+E EVL EL+ GA VLYTT RSE H + LRLD +S E ETVLRRA+ +D + LP+ A + + G +MDL Y+GRW V D +AW+ +N +F + G ++ T W T +L AG+ +LA D+ + LYLSLAV+PK + F DA ALL G DL V ++ E+ +++ + GG Y MH ADFVR +I+ +P + A W +H ST ALFAWP++ V I ++ + VE P YD L +D SD VL RVA LAG + A A + +L+ + S R+ E LA LG+ G EA A +A ++EE
Sbjct: 1 MVGLAGPTGCGKSTVTSLVVAREDVRAHFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITRPGGEEGDGGGESHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDXXXXXXXGDHADV----LRLDNISDAEGETVLRRASGLDPEAELPQPALDLFKSYGSVVMDLAYIGRWGVVHGTTDVKAWEVALNSVFLEGGEGGQEWTRRR--WHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPADAAALLFGGDTKAAKAATPDLGAVMEVLGVLEQCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHASTPAALFAWPVEDSVRIQWALSSLDDAVEPPPPYDAMLDGMDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVVVTES-RLEREAAGGGDSISQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSIREE 520
BLAST of mRNA_H-elongata_contig18719.5102.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 256 bits (653), Expect = 7.560e-68 Identity = 181/512 (35.35%), Postives = 259/512 (50.59%), Query Frame = 1
Query: 19 ARRVKLPVGAPTIYAWHVERGAVIATLCDRLGVTYSSGEASAEPPLVGLAGPPGSGKSIAASMIIAQEDIREHFFKGVVWLPVGPGAKDRLRVLMYRLADMIYETTLGLKGRSPQTPDIGVDAEDGATYIREVV----GIDSRRLLIVADDVWEVEVLRELRSTGASVLYTTRSEHI--SIEFPPLRLDAVSHHEAETVLRRAAEVDGKDPLPKMAYYIIERCGPSIMDLVYVGRWSAVRKRVDREAWQNHINRI---------FDAQRGVEDRTIPLVLWRTGLLRAGLDELACDGDQTRA--LYLSLAVIPKRVIFRLEDAVALLHDGTCDLEDLEKVRRIMATFERMAIVARQVGGLYRMHDVQADFVRTVITDYPSTHDTAHAHWVKHVSTAKALFAWPLDALVDIWRSVER-SREGVETT-PYDTALQKIDVSD-PRLPKVLRRVAYFYWLAGYHDAACATWVKLLAIEGSIRVNDEFPNLARTQFELGLYQKNAGRINEAGAWFRQ 1494
A+ +P G PT +WHVER V T+ L +A P LVGL G G+GK+ AAS I++ +RE F G+VWLPV G D L LM +LA M++E G GR P D DG Y+++ V G + L+VAD+VWE +V+ +L TG +L +TR E + + +D +S EAE+VLRRAAE+ + LP A +IE CG MDL +VGRWS VR R DR AW + ++ G ED + R +L+AG ++LA D R LYLSLAV+P F ++DA LL+D ED V ++ ER I+ R V YRMHD ++F R + D A V+ +S+ +AL + L +W V+R +G TT PY+ AL+ +D S+ P + + VA+F A TW +LLA+E +++ + P + T L ++ + EA W R+
Sbjct: 198 AKVANVPKGTPTHKSWHVERRNVTETVFQAL-------DADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSD------DGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNR---RRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTII-RSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVE-EVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRK 691
BLAST of mRNA_H-elongata_contig18719.5102.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 248 bits (633), Expect = 2.350e-65 Identity = 177/508 (34.84%), Postives = 256/508 (50.39%), Query Frame = 1
Query: 13 NLARRVKLPVGAPTIYAWHVERGAVIATLCDRLGVTYSSGEASAEPPLVGLAGPPGSGKSIAASMIIAQEDIREHFFKGVVWLPVGPGAKDRLRVLMYRLADMIYETTLGLKGRSPQTPDIGVDAEDGATYIREVV--GIDSRRL--LIVADDVWEVEVLRELRSTGASVLYTTRSEHI--SIEFPPLRLDAVSHHEAETVLRRAAEVDGKDPLPKMAYYIIERCGPSIMDLVYVGRWSAVRKRVDREAWQNHINRIFDAQRGV-------EDRTIPLVLWRTGLLRAGLDELACDGDQTRA--LYLSLAVIPKRVIFRLEDAVALLHDGTCDLEDLEKVRRIMATFERMAIVARQVGGLYRMHDVQADFVRTVITDYPSTHDTAHAHWVKHVSTAKALFAWPLDALVDIWRSVER-SREGV-ETTPYDTALQKIDVSDPRLPKVLRRVAYFYWLAGYHDAACATWVKLLAIEGSIRVNDEFPNLARTQFELGLYQKNAGRINEAGAW 1485
+ + +P+GAP +WHVER +AT+ D L S +V LAG GSGK+ A+ I+ ++RE F G+VWLPV GAK RL LM +LA M++E G GR P +ED ATYI++ + G RRL L+VAD+VWE +V+ +L TG VL +TR E + + +D +S +AE+VL+RAAE+ + LP A +I+ CG MD+ +VGRWS VR R D +W + + I V IP R +L+ G ++LA D R LYLSLAV+P F L+DA LL+D + ED ++ ER +I+ R G YRMHD DF R + D A W +++S+ L + L +W ++ER +G +T PY+ AL + SD L V +F + A A+W +LL +E + + P + T L ++ + G I EA W
Sbjct: 173 SFGKLAAVPMGAPVRKSWHVERRHAMATVLDALN-------GSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSA------SEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKR-RKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSII-RSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKR-ELGADHPFVLNTYGNLAIWAERLGNIEEAAKW 664 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18719.5102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18719.5102.1 >prot_H-elongata_contig18719.5102.1 ID=prot_H-elongata_contig18719.5102.1|Name=mRNA_H-elongata_contig18719.5102.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=911bp MSVSNLARRVKLPVGAPTIYAWHVERGAVIATLCDRLGVTYSSGEASAEPback to top mRNA from alignment at H-elongata_contig18719:3361..6093+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18719.5102.1 ID=mRNA_H-elongata_contig18719.5102.1|Name=mRNA_H-elongata_contig18719.5102.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2733bp|location=Sequence derived from alignment at H-elongata_contig18719:3361..6093+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18719:3361..6093+ >mRNA_H-elongata_contig18719.5102.1 ID=mRNA_H-elongata_contig18719.5102.1|Name=mRNA_H-elongata_contig18719.5102.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5466bp|location=Sequence derived from alignment at H-elongata_contig18719:3361..6093+ (Himanthalia elongata Himel1 dioecious)back to top |