mRNA_H-elongata_contig186972.5093.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig186972.5093.1 vs. uniprot
Match: Q2TUD8_9PHAE (ATPase subunit 8 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUD8_9PHAE) HSP 1 Score: 113 bits (282), Expect = 7.290e-32 Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 1
Query: 1 MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLTDDPKLRGY 171
MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLTDDP+LRGY
Sbjct: 1 MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLTDDPRLRGY 57
BLAST of mRNA_H-elongata_contig186972.5093.1 vs. uniprot
Match: A0A8F0FCZ2_9PHAE (ATPase subunit 8 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0FCZ2_9PHAE) HSP 1 Score: 100 bits (250), Expect = 5.600e-27 Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 1
Query: 1 MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLTDDPKLRGY 171
MPQFDTMTFFNQVFWL++IVFNFYVVVVRFMLP LAFSLKSR+KNLRLT+DPK R Y
Sbjct: 1 MPQFDTMTFFNQVFWLILIVFNFYVVVVRFMLPSLAFSLKSRSKNLRLTEDPKSRTY 57
BLAST of mRNA_H-elongata_contig186972.5093.1 vs. uniprot
Match: A0A8F0K0K4_9PHAE (ATPase subunit 8 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0K0K4_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 8.690e-22 Identity = 42/53 (79.25%), Postives = 50/53 (94.34%), Query Frame = 1
Query: 1 MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLTDDPK 159
MPQFDT+TFFNQVFWL++IVFN YV+VVRF+LP LAFSLKSRNKNLR+T+D +
Sbjct: 1 MPQFDTLTFFNQVFWLILIVFNSYVIVVRFLLPSLAFSLKSRNKNLRVTNDSR 53
BLAST of mRNA_H-elongata_contig186972.5093.1 vs. uniprot
Match: A0A2R4QQ70_9PHAE (ATP synthase F0 subunit 8 n=3 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ70_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 9.230e-21 Identity = 40/53 (75.47%), Postives = 48/53 (90.57%), Query Frame = 1
Query: 1 MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLTDDPK 159
MPQFD MTFFNQVFWL++I+ NFYV+++RFMLP LAFSLKSR KNLRLTD+ +
Sbjct: 1 MPQFDIMTFFNQVFWLIIILLNFYVIILRFMLPSLAFSLKSRYKNLRLTDESR 53
BLAST of mRNA_H-elongata_contig186972.5093.1 vs. uniprot
Match: A0A0U1XD87_9PHAE (ATP synthase F0 subunit 8 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XD87_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 7.980e-20 Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 1
Query: 1 MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRL 144
MPQFDTMTFFNQVFWL+ IVF+FYV+VVR+MLP LAFSLKSR+KNLRL
Sbjct: 1 MPQFDTMTFFNQVFWLISIVFSFYVIVVRYMLPVLAFSLKSRSKNLRL 48
BLAST of mRNA_H-elongata_contig186972.5093.1 vs. uniprot
Match: A0A0U1V1N0_SARFS (ATP synthase F0 subunit 8 n=23 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1V1N0_SARFS) HSP 1 Score: 82.4 bits (202), Expect = 1.080e-19 Identity = 39/53 (73.58%), Postives = 48/53 (90.57%), Query Frame = 1
Query: 1 MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLTDDPK 159
MPQFDT+TFFNQVFWLV+IVFNFY +++RFMLP LA SLK+RNKNLR T++ +
Sbjct: 1 MPQFDTITFFNQVFWLVLIVFNFYFIILRFMLPSLASSLKARNKNLRYTEESR 53
BLAST of mRNA_H-elongata_contig186972.5093.1 vs. uniprot
Match: A0A3G5FPM1_9PHAE (ATP synthase F0 subunit 8 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPM1_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 1.130e-19 Identity = 40/55 (72.73%), Postives = 49/55 (89.09%), Query Frame = 1
Query: 1 MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLTDDPKLR 165
MPQFDTMTFFNQVFWL+ IVF FY++VVR+MLP +AFSLKSR+KNL+LT K++
Sbjct: 1 MPQFDTMTFFNQVFWLLNIVFAFYIIVVRYMLPGIAFSLKSRSKNLKLTTTTKIK 55
BLAST of mRNA_H-elongata_contig186972.5093.1 vs. uniprot
Match: A0A1I9LW72_9PHAE (ATPase subunit 8 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW72_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 2.290e-19 Identity = 39/49 (79.59%), Postives = 45/49 (91.84%), Query Frame = 1
Query: 1 MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLT 147
MPQFDTMTFFNQVFWL+ I+F FYV++VR+MLP LAFSLKSR+KN RLT
Sbjct: 1 MPQFDTMTFFNQVFWLISIIFTFYVIIVRYMLPSLAFSLKSRSKNQRLT 49
BLAST of mRNA_H-elongata_contig186972.5093.1 vs. uniprot
Match: O78795_PYLLI (ATPase subunit 8 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=O78795_PYLLI) HSP 1 Score: 80.5 bits (197), Expect = 6.570e-19 Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 1
Query: 1 MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLTDDP 156
MPQFDTMTFFNQVFWLV IVF FY+ VVR+MLP LAFSLKSR+KNL+L P
Sbjct: 1 MPQFDTMTFFNQVFWLVSIVFAFYMTVVRYMLPVLAFSLKSRSKNLKLATTP 52
BLAST of mRNA_H-elongata_contig186972.5093.1 vs. uniprot
Match: A0A8F0FD46_9PHAE (ATPase subunit 8 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0FD46_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 6.570e-19 Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = 1
Query: 1 MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLTDDPK 159
MPQFD MTFFNQ FWL+++VFNFY VV+RF+LP LAFSLKSRNK LR+T++ +
Sbjct: 1 MPQFDIMTFFNQAFWLILLVFNFYAVVLRFLLPSLAFSLKSRNKVLRVTEESR 53 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig186972.5093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig186972.5093.1 >prot_H-elongata_contig186972.5093.1 ID=prot_H-elongata_contig186972.5093.1|Name=mRNA_H-elongata_contig186972.5093.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp MPQFDTMTFFNQVFWLVVIVFNFYVVVVRFMLPPLAFSLKSRNKNLRLTDback to top mRNA from alignment at H-elongata_contig186972:198..371- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig186972.5093.1 ID=mRNA_H-elongata_contig186972.5093.1|Name=mRNA_H-elongata_contig186972.5093.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=174bp|location=Sequence derived from alignment at H-elongata_contig186972:198..371- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig186972:198..371- >mRNA_H-elongata_contig186972.5093.1 ID=mRNA_H-elongata_contig186972.5093.1|Name=mRNA_H-elongata_contig186972.5093.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=348bp|location=Sequence derived from alignment at H-elongata_contig186972:198..371- (Himanthalia elongata Himel1 dioecious)back to top |