mRNA_H-elongata_contig18629.5065.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18629.5065.1
Unique NamemRNA_H-elongata_contig18629.5065.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig18629.5065.1 vs. uniprot
Match: D7FIH9_ECTSI (Sof1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIH9_ECTSI)

HSP 1 Score: 769 bits (1985), Expect = 1.250e-275
Identity = 373/417 (89.45%), Postives = 397/417 (95.20%), Query Frame = 1
Query:    1 PLNQAREYTRALTAVKLDKIFAKPLVGALDGHGDGVFCTATSRRSLVQFLSGACDGEIRLWDLSRRSCVWRAVGHRGFVRGLSVTPDGESFMSAGDDGIVKQWDLTVTSDLTETPEPTATWMSKSGGFKSLDHHWADGKFATAGDSVDLWDHVRAEPTLSYQWGADSINCVRQALFNPAERCLVASTGSSREVCLYDTRVSVPMRKVVLKMRSNAVAWNPQEPMNFVCANEDTNLYTFDMRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRTGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASQRLGATVPREARKQQYRNSLKKRFEHMPEVRRIAKHRHVPKIIKKAAEAERVQRDKARRKVDNRIKHSKPGTVETVPERKQKVVKELT 1251
            P  +AREYTRAL +VKLDK+FAKPLVGALDGHGDGVFC+A+SRR+LVQFLSGACDGEIRLWDLSRRSCVWRAVGH+GFVRGLSVTPDG SF+SAGDDG+VKQW+L V SDL+ETPEPTATWM KSGGFKSLDHHW D KFATAGDSVDLWDH RAEPTLSYQWGADS NCVR   FNPAERCL+ASTGSSREVCLYDTR +VPMRKVVL+MRSNAVAWNPQEPMNFVCANEDTNLYTFD+RNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHR GRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANAS++LG  VPREARKQ+YR+SLKKR+EHMPEVRRIAKHRHVP+I+KKAAEAERVQRDK RRKVDNRIKHSK GTVETVPERK+K+VKELT
Sbjct:   34 PFEKAREYTRALQSVKLDKMFAKPLVGALDGHGDGVFCSASSRRNLVQFLSGACDGEIRLWDLSRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTATWMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVR---FNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDNRIKHSKAGTVETVPERKKKIVKELT 447          
BLAST of mRNA_H-elongata_contig18629.5065.1 vs. uniprot
Match: A0A836C9W7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W7_9STRA)

HSP 1 Score: 565 bits (1456), Expect = 2.520e-195
Identity = 271/417 (64.99%), Postives = 332/417 (79.62%), Query Frame = 1
Query:    1 PLNQAREYTRALTAVKLDKIFAKPLVGALDGHGDGVFCTATSRRSLVQFLSGACDGEIRLWDLSRRSCVWRAVGHRGFVRGLSVTPDGESFMSAGDDGIVKQWDLTVTSDLTETPEPTATWMSKSGGFKSLDHHWADGKFATAGDSVDLWDHVRAEPTLSYQWGADSINCVRQALFNPAERCLVASTGSSREVCLYDTRVSVPMRKVVLKMRSNAVAWNPQEPMNFVCANEDTNLYTFDMRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRTGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASQRLGATVPREARKQQYRNSLKKRFEHMPEVRRIAKHRHVPKIIKKAAEAERVQRDKARRKVDNRIKHSKPGTVETVPERKQKVVKELT 1251
            P  +AREY RAL A KLDK+FAKP +GALDGH DGVFCTATS ++LVQFLSGACDGE+R+WDLSRR+CVW+A  H GFVRG++VTPDG SF+SAGDDG+VK+WDL + SDL E P PTA W  K G F++LDHHW D  FATA D+V+LWD  RAEPT +++WGAD++N VR   FNPAERCL+ASTGS R   LYD R + P+RKV L+MRSN VAWNP+ P  F  A ED   YTFD+R L  AL++HKDHV AVM V+FSPTG+E A+  YDRT+R+F  R GRSREVYHT+RMQR FCV +SADAR+V++GSDDT +RIWKA AS+RLGA VPREAR+ +Y ++LK+R+  MP+VRRIAKHRHVP+ ++ AA AE VQRDKA+RK DN  +H+K G    VPER+++V+ E T
Sbjct:   34 PFEKAREYGRALQATKLDKMFAKPFIGALDGHTDGVFCTATSPKNLVQFLSGACDGEVRVWDLSRRACVWKAAAHTGFVRGVAVTPDGRSFLSAGDDGLVKRWDLAIASDLEERPRPTAQWTGKMG-FRALDHHWGDATFATASDAVELWDAERAEPTHAFRWGADAVNSVR---FNPAERCLLASTGSDRGAALYDARAAAPLRKVFLRMRSNGVAWNPRVPAQFALACEDHCAYTFDVRRLGAALVVHKDHVGAVMAVAFSPTGRELATAGYDRTLRIFGARDGRSREVYHTQRMQRAFCVAYSADARYVLSGSDDTCVRIWKARASERLGAIVPREARRLRYLDTLKRRYADMPDVRRIAKHRHVPRAVRGAARAEGVQRDKAKRKADNVRRHAKDGGDAPVPERRRRVIAEQT 446          
BLAST of mRNA_H-elongata_contig18629.5065.1 vs. uniprot
Match: A0A024UAB8_9STRA (Sof1 domain-containing protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAB8_9STRA)

HSP 1 Score: 508 bits (1307), Expect = 1.930e-172
Identity = 252/439 (57.40%), Postives = 320/439 (72.89%), Query Frame = 1
Query:    1 PLNQAREYTRALTAVKLDKIFAKPLVGALDGHGDGVFCTATSRRSLVQFLSGACDGEIRLWDLSRRSCVWRAVGHRGFVRGLSVTPDGESFMSAGDDGIVKQWDLTVTSDLTETPEPTATWMSKSGGFKSLDHHWADGKFATAGDSVDLWDHVRAEPTLSYQWGADSINCVRQALFNPAERCLVASTGSSREVCLYDTRVSVPMRKVVLKMRSNAVAWNPQEPMNFVCANEDTNLYTFDMRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRTGRSREVYHTKRMQR-----------------------VFCVNFSADARFVMTGSDDTNLRIWKANASQRLGATVPREARKQQYRNSLKKRFEHMPEVRRIAKHRHVPKIIKKAAEAERVQRDKARRKVDNRIKHSKPGTVETVPERKQKVVKEL 1248
            P  + REYTRAL AVKLDK+FAKP VGALDGH D V C ATS +SLVQF+SGACDGEIRLWDL RR CVW   GH GFVRGL+V PDG +F S  +D  +KQW + + ++  ++PEP  T+  K   F  +DHHW++  FAT    V +WDH R++P   Y WGADSI  V+   FNPAE  L+ASTGS R V LYDTR++  MRK+V++MR+NA+AWNP EP +F  ANED NLYTFDMRNL++A+MIHKDHVSAVMDV++SPTG+EF SGSYDR++R+F  R+ +SREVYHTKRMQR                       +F V FSADA+FV++GSDDTN+RIWKA AS+ LG   PRE +K +Y ++LKKR++H+ EV+RIAKHRHVPK IKKAA A++  +++  +K+ N  KHSKPG V  V  RK+ V++++
Sbjct:   34 PFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKES-FMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVK---FNPAEASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSYDRSIRIFNVRSAKSREVYHTKRMQRWVHKIAGWMHRGDLMGGLFLNCRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRTLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRHVPKAIKKAAAAKQEGKERETKKLANVRKHSKPGKVPLVDIRKKSVIRQV 467          
BLAST of mRNA_H-elongata_contig18629.5065.1 vs. uniprot
Match: A0A418B2S4_9STRA (SAM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B2S4_9STRA)

HSP 1 Score: 508 bits (1307), Expect = 8.990e-168
Identity = 252/439 (57.40%), Postives = 320/439 (72.89%), Query Frame = 1
Query:    1 PLNQAREYTRALTAVKLDKIFAKPLVGALDGHGDGVFCTATSRRSLVQFLSGACDGEIRLWDLSRRSCVWRAVGHRGFVRGLSVTPDGESFMSAGDDGIVKQWDLTVTSDLTETPEPTATWMSKSGGFKSLDHHWADGKFATAGDSVDLWDHVRAEPTLSYQWGADSINCVRQALFNPAERCLVASTGSSREVCLYDTRVSVPMRKVVLKMRSNAVAWNPQEPMNFVCANEDTNLYTFDMRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRTGRSREVYHTKRMQR-----------------------VFCVNFSADARFVMTGSDDTNLRIWKANASQRLGATVPREARKQQYRNSLKKRFEHMPEVRRIAKHRHVPKIIKKAAEAERVQRDKARRKVDNRIKHSKPGTVETVPERKQKVVKEL 1248
            P  + REYTRAL AVKLDK+FAKP VGALDGH D V C ATS +SLVQF+SGACDGEIRLWDL RR CVW   GH GFVRGL+V PDG +F S  +D  +KQW + + ++  ++PEP  T+  K   F  +DHHW++  FAT    V +WDH R++P   Y WGADSI  V+   FNPAE  L+ASTGS R V LYDTR++  MRK+V++MR+NA+AWNP EP +F  ANED NLYTFDMRNL++A+MIHKDHVSAVMDV++SPTG+EF SGSYDR++R+F  R+ +SREVYHTKRMQR                       +F V FSADA+FV++GSDDTN+RIWKA AS+ LG   PRE +K +Y ++LKKR++H+ EV+RIAKHRHVPK IKKAA A++  +++  +K+ N  KHSKPG V  V  RK+ V++++
Sbjct:  368 PFERPREYTRALNAVKLDKLFAKPFVGALDGHCDSVSCFATSNKSLVQFVSGACDGEIRLWDLPRRKCVWSVYGHGGFVRGLTVAPDGNTFFSCSEDKSIKQWRMAIANE-DDSPEPVQTFHGKES-FMGIDHHWSNTTFATCSSVVQVWDHNRSDPIHHYSWGADSITSVK---FNPAEASLLASTGSDRAVSLYDTRLAQSMRKIVMEMRNNALAWNPMEPYHFTVANEDHNLYTFDMRNLDRAVMIHKDHVSAVMDVAYSPTGKEFVSGSYDRSIRIFNVRSAKSREVYHTKRMQRWVHKIAGWMHRGDLMGWLFLNCRIFAVKFSADAKFVLSGSDDTNIRIWKAQASRTLGKLNPRERKKLEYNDALKKRYQHLTEVKRIAKHRHVPKAIKKAAAAKQEGKERETKKLANVRKHSKPGKVPLVDIRKKSVIRQV 801          
BLAST of mRNA_H-elongata_contig18629.5065.1 vs. uniprot
Match: A0A482SJF6_9ARCH (Sof1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJF6_9ARCH)

HSP 1 Score: 489 bits (1258), Expect = 2.280e-165
Identity = 240/416 (57.69%), Postives = 300/416 (72.12%), Query Frame = 1
Query:    1 PLNQAREYTRALTAVKLDKIFAKPLVGALDGHGDGVFCTATSRRSLVQFLSGACDGEIRLWDLSRRSCVWRAVGHRGFVRGLSVTPDGESFMSAGDDGIVKQWDLTVTSDLTETPEPTATWMSKSGGFKSLDHHWADGKFATAGDSVDLWDHVRAEPTLSYQWGADSINCVRQALFNPAERCLVASTGSSREVCLYDTRVSVPMRKVVLKMRSNAVAWNPQEPMNFVCANEDTNLYTFDMRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRTGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASQRLGATVPREARKQQYRNSLKKRFEHMPEVRRIAKHRHVPKIIKKAAEAERVQRDKARRKVDNRIKHSKPGTVETVPERKQKVVKEL 1248
            P  +AREY RA+ A KLDKIFAKP VGALDGH DGV+C ++ R  LV F+SG+CDGE+R+WDLS + CVW A+ H GFVRG++    G +F S GDD ++K W L    +      P    +  S    S+DHHW D +FAT+GD V +WD  RA+P  +Y+WGADS+ CVR   +NPAE CL+ASTG+ R VCLYD R S+PMRK+V+ M +N VAWNP+EPMNF  A+ED NLYTFDMR L+ ALMIHKDHV AVMDV++SPTG+EF S SYDRTVR+F   +G+SRE YHTKRMQRVFC  FSADA +V++GSDDTN+RIW++ AS+       R  RK+QY  SLKKRF HMPE++R+   + +PK I+KA     VQR    RK +NRIKHSK G+V    ERK+ V+KEL
Sbjct:   34 PFERAREYARAVVATKLDKIFAKPFVGALDGHKDGVYCMSSVRSHLVPFISGSCDGELRVWDLSTKHCVWHAIAHEGFVRGVAPDVAGNAFYSCGDDKVIKLWALQHQLEEEGEVSPLNV-IHSSHSMTSIDHHWVDSQFATSGDVVSIWDGTRAQPINTYKWGADSVLCVR---YNPAEACLLASTGNDRSVCLYDLRSSLPMRKMVMAMNANKVAWNPREPMNFTLASEDYNLYTFDMRKLDHALMIHKDHVGAVMDVAYSPTGREFVSASYDRTVRIFNVTSGKSREAYHTKRMQRVFCSAFSADAEYVLSGSDDTNVRIWRSVASKSGAVDSGRAERKKQYMQSLKKRFAHMPEIKRMNSDKKLPKAIRKAKGIMHVQRLSQHRKTENRIKHSKEGSVILPTERKKAVIKEL 445          
BLAST of mRNA_H-elongata_contig18629.5065.1 vs. uniprot
Match: M4C0L6_HYAAE (DDB1- and CUL4-associated factor 13 n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4C0L6_HYAAE)

HSP 1 Score: 486 bits (1250), Expect = 2.890e-164
Identity = 242/416 (58.17%), Postives = 303/416 (72.84%), Query Frame = 1
Query:    1 PLNQAREYTRALTAVKLDKIFAKPLVGALDGHGDGVFCTATSRRSLVQFLSGACDGEIRLWDLSRRSCVWRAVGHRGFVRGLSVTPDGESFMSAGDDGIVKQWDLTVTSDLTETPEPTATWMSKSGGFKSLDHHWADGKFATAGDSVDLWDHVRAEPTLSYQWGADSINCVRQALFNPAERCLVASTGSSREVCLYDTRVSVPMRKVVLKMRSNAVAWNPQEPMNFVCANEDTNLYTFDMRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRTGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASQRLGATVPREARKQQYRNSLKKRFEHMPEVRRIAKHRHVPKIIKKAAEAERVQRDKARRKVDNRIKHSKPGTVETVPERKQKVVKEL 1248
            P  + REYTRAL AVKL+++FAKP +GALDGH DGV   ATS  SLV  +SGA DGE+R+WDL RR CVW   GHRGFVRGL+VTPDG +F S  +D  VKQW L V S+  + P   AT+ SK   F  +DHHW+   FAT G  V +WD  R+ PT  + WGADSIN V    FNPAE  L+ASTGS R + LYD RV+  MRK+V++MRSNA+AWNP EPMNF  ANE+ NLYTFDMR +N+A+M+HKDHVSAVMDV++SPTG+EF +GSYDRT+R+F  R+ +SREVYHT+RMQR       AD+ FV++GSDDTN+R+WKA AS++L    PRE RK +Y  SLK R++H+ E+ RIAKHRHVPK IKKAA A+R    + ++K+ NR  H+K G V     R++ VVKE+
Sbjct:   34 PFERPREYTRALNAVKLERMFAKPFIGALDGHCDGVTALATSPSSLVPLVSGAADGEVRVWDLPRRKCVWNVYGHRGFVRGLAVTPDGSTFYSCSEDKTVKQWALRVKSEDEDVPTALATFTSKEP-FLGIDHHWSQKMFATCGSKVQVWDPSRSTPTHEFAWGADSINSVH---FNPAEASLLASTGSDRNITLYDIRVASSMRKIVMEMRSNALAWNPMEPMNFTVANENHNLYTFDMRKMNRAMMVHKDHVSAVMDVAYSPTGREFVAGSYDRTIRIFNVRSTKSREVYHTQRMQR-------ADSNFVLSGSDDTNIRVWKAEASKKLSKVGPRERRKIEYNESLKDRYQHLREISRIAKHRHVPKAIKKAAHAKREASSRDQKKMANRRAHAKEGAVPHTNIREKVVVKEM 438          
BLAST of mRNA_H-elongata_contig18629.5065.1 vs. uniprot
Match: A0A6P4ZG13_BRABE (DDB1- and CUL4-associated factor 13 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZG13_BRABE)

HSP 1 Score: 466 bits (1200), Expect = 1.310e-156
Identity = 224/415 (53.98%), Postives = 288/415 (69.40%), Query Frame = 1
Query:    1 PLNQAREYTRALTAVKLDKIFAKPLVGALDGHGDGVFCTATSRRSLVQFLSGACDGEIRLWDLSRRSCVWRAVGHRGFVRGLSVTPDGESFMSAGDDGIVKQWDLTVTSDLTETPEPTATWMSKSGGFKSLDHHWADGKFATAGDSVDLWDHVRAEPTLSYQWGADSINCVRQALFNPAERCLVASTGSSREVCLYDTRVSVPMRKVVLKMRSNAVAWNPQEPMNFVCANEDTNLYTFDMRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRTGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASQRLGATVPREARKQQYRNSLKKRFEHMPEVRRIAKHRHVPKIIKKAAEAERVQRDKARRKVDNRIKHSKPGTVETVPERKQKVVKE 1245
            P   AREYTRAL A KL+++FAKP VGALDGH DGV C A    SL   L+GACDGEI++W+L  R C      H GFVRG+ VTPD  + +S GDD  +K W LT      E  EP  T + KS  F  +DHHW D  FAT G +VD+WDH RAEP  S+ WG DS+NCVR   FNP E+  +AS  + R + LYDTR S P+RKV+L MRSN +AWNP E   F  ANED NLY+FD+R L     IH DHV+AV+D+ +SPTG+EF SGS+D+T+R+FP   GRSREVYHTKRMQRVFC+ +S D +++++GSD+TN+RIWKA A++++G   PRE     Y + LK++F+H P+VRRIA+HRHVPK +       R+ +D  RRK +NRI+HSKPG+++   ER++ VV E
Sbjct:   34 PFEAAREYTRALNATKLERVFAKPFVGALDGHRDGVNCMAKHPGSLSTLLTGACDGEIKIWNLGSRDCRRTIQAHTGFVRGMCVTPDHGNVLSIGDDKTIKMWSLTSPEAGEEEEEPVQTILGKSI-FTGIDHHWKDATFATCGQTVDIWDHARAEPLRSFSWGVDSLNCVR---FNPIEKHYLASCAADRSIILYDTRGSSPLRKVILNMRSNVLAWNPMEAFVFTVANEDHNLYSFDIRRLTSPFNIHMDHVNAVLDLDYSPTGREFVSGSFDKTIRIFPLEKGRSREVYHTKRMQRVFCIKWSLDNKYILSGSDETNVRIWKAKAAEKIGKLTPREESALTYSDKLKEKFQHHPQVRRIARHRHVPKEVYHLTRQTRIMKDSRRRKEENRIRHSKPGSIKKKREREKVVVAE 444          
BLAST of mRNA_H-elongata_contig18629.5065.1 vs. uniprot
Match: W1P0N3_AMBTC (DDB1- and CUL4-associated factor 13 n=3 Tax=Magnoliopsida TaxID=3398 RepID=W1P0N3_AMBTC)

HSP 1 Score: 459 bits (1180), Expect = 1.670e-153
Identity = 219/419 (52.27%), Postives = 304/419 (72.55%), Query Frame = 1
Query:   10 QAREYTRALTAVKLDKIFAKPLVGALDGHGDGVFCTATSRRSLVQFLSGACDGEIRLWDLSRRSCVWRAVGHRGFVRGLSVTPDGESFMSAGDDGIVKQWDLT--VTSDLTETPE----PTATWMSKSGGFKSLDHHWADGKFATAGDSVDLWDHVRAEPTLSYQWGADSINCVRQALFNPAERCLVASTGSSREVCLYDTRVSVPMRKVVLKMRSNAVAWNPQEPMNFVCANEDTNLYTFDMRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRTGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASQRLGATVPREARKQQYRNSLKKRFEHMPEVRRIAKHRHVPKIIKKAAEAERVQRDKARRKVDNRIKHSKPGTVETVPERKQKVVKEL 1248
            +A EY RAL A KL+KIFAKP +GA+DGH D + C A +   L    SG+ DG+IRLWD+S RS V + VGH+G VRGL+ + DG   +S G+D  V+ W +     +DL +  E    P A ++SK+  F+++DH W    FAT G  VD+WDH R+EP  S+ WG+D++  VR   FNPA + ++A++ S R + LYD R+++P +K+V++ R+NA+AWNP+EPMNF  ANED N Y++DMRN+ QA  +H+DHVSAVMD+ +SPTG+EF +GSYDRTVR+F +  G SRE+YHTKRMQRVFCV FS DA +V++GSDDTNLR+WKA AS++LG  +PRE +KQ+Y +++K+RF+H+PEV+RI +HRH+PK I KAA   R   D  ++K + +  HS PGTV TVP RK+++V E+
Sbjct:   37 KAVEYARALNAAKLEKIFAKPFLGAMDGHVDAISCMAKNPNYLKGIFSGSMDGDIRLWDISSRSTVQQFVGHKGAVRGLAASTDGSILVSCGNDCTVRLWSIPGPKIADLDDASENASNPLAVYVSKNA-FRAVDHQWDGNLFATVGAQVDIWDHSRSEPVTSFAWGSDTVVSVR---FNPAHKDILATSASDRSITLYDLRMALPSKKIVMQTRTNAIAWNPREPMNFSLANEDCNCYSYDMRNMEQAKCVHRDHVSAVMDIDYSPTGREFVTGSYDRTVRIFQYNAGHSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLLPRERKKQEYLDAVKERFKHLPEVKRIVRHRHLPKPIYKAASLRRTMADAEKKKEERKRAHSAPGTVVTVPLRKRRIVSEI 451          
BLAST of mRNA_H-elongata_contig18629.5065.1 vs. uniprot
Match: A0A8J1UDZ4_OWEFU (Ofus.G112908 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UDZ4_OWEFU)

HSP 1 Score: 450 bits (1158), Expect = 2.730e-150
Identity = 224/416 (53.85%), Postives = 291/416 (69.95%), Query Frame = 1
Query:    1 PLNQAREYTRALTAVKLDKIFAKPLVGALDGHGDGVFCTATSRRSLVQFLSGACDGEIRLWDLSRRSCVWRAVGHRGFVRGLSVTPDGESFMSAGDDGIVKQWDLTVTSDLTETPEPTATWMSKSGGFKSLDHHWADGKFATAGDSVDLWDHVRAEPTLSYQWGADSINCVRQALFNPAERCLVASTGSSREVCLYDTRVSVPMRKVVLKMRSNAVAWNPQEPMNFVCANEDTNLYTFDMRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRTGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASQRLGATVPREARKQQYRNSLKKRFEHMPEVRRIAKHRHVPKIIKKAAEAERVQRDKARRKVDNRIKHSKPGTVETVPERKQKVVKEL 1248
            P   AREYT+AL A KLD++FAKP +G+L+GH DG+ C ++   SL   LSGACDGEIR WDL++R+C      H GFVRGL+VTP  ESF S GDD I+KQW +T  +  +E  EPT T + K+  ++ + HHW D  FAT G  VD+W+  RAEP  ++ WG DSI+ ++   +N  E  L+A+T S R + LYD R S P+RKV+LK+RSNA+AWNP E   F  ANED NLYTFDMRNL + L +H DHVSAV+DV +SPTG+EF SGSYD+++R+FP   GRSREVYH KRMQRV CV +S D +++++GSD+TN+RIWKANAS++LG   PRE         LK++F H P+VRRI KHRHVP +I  A +   + ++  +RK  NR  HSKPG V  V E+K+ VV EL
Sbjct:   34 PFEAAREYTKALNASKLDRVFAKPFLGSLNGHRDGIHCMSSHPSSLSTILSGACDGEIRQWDLAKRTCTRTINAHEGFVRGLTVTPSAESFYSCGDDKIIKQWRMTPENP-SEKEEPTHTIIGKTI-YEGISHHWRDNVFATCGQQVDIWNVDRAEPVRTFTWGVDSISHIK---YNHIETHLLAATASDRSIMLYDMRGSNPLRKVILKLRSNAIAWNPMEAFIFTVANEDYNLYTFDMRNLKEPLNLHMDHVSAVLDVDYSPTGKEFVSGSYDKSIRIFPIEKGRSREVYHAKRMQRVSCVKWSRDNKYILSGSDETNIRIWKANASEKLGVLKPRERAAFNEVTKLKEKFVHHPKVRRIIKHRHVPGMIYSAKKEHAIIKESRKRKEHNRRVHSKPGAVPFVAEKKKHVVAEL 444          
BLAST of mRNA_H-elongata_contig18629.5065.1 vs. uniprot
Match: A0A067DNC0_CITSI (DDB1- and CUL4-associated factor 13 n=11 Tax=Sapindales TaxID=41937 RepID=A0A067DNC0_CITSI)

HSP 1 Score: 449 bits (1155), Expect = 9.810e-150
Identity = 218/422 (51.66%), Postives = 298/422 (70.62%), Query Frame = 1
Query:    1 PLNQAREYTRALTAVKLDKIFAKPLVGALDGHGDGVFCTATSRRSLVQFLSGACDGEIRLWDLSRRSCVWRAVGHRGFVRGLSVTPDGESFMSAGDDGIVKQWD-----LTVTSDLTE-TPEPTATWMSKSGGFKSLDHHWADGKFATAGDSVDLWDHVRAEPTLSYQWGADSINCVRQALFNPAERCLVASTGSSREVCLYDTRVSVPMRKVVLKMRSNAVAWNPQEPMNFVCANEDTNLYTFDMRNLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRTGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASQRLGATVPREARKQQYRNSLKKRFEHMPEVRRIAKHRHVPKIIKKAAEAERVQRDKARRKVDNRIKHSKPGTVETVPERKQKVVKEL 1248
            P  +A EY RALTA KL+KIFA+P +GALDGH DG+ C A +   L  F SG+ DG+IRLWD++ R  V +  GH+G VRGL+V+ DG   +S G D  VK W+     LT + D T+ + EP A ++ K+  F ++DH W    FATAG  VD+W+H R++P  S+QWG D++  VR   FNPAE  ++A+T S R + LYD R+S P RKV+++ +SN+++WNP EPMNF  ANED N Y++D R L++A  +H  H SAVMD+ +SPTG+EF +GSYDRT+R+F +  GRSRE+YHTKRMQRVFCV FS DA +V++GSDDTNLR+WKA AS++LG   PRE RK  Y  ++K R++H+PE++RI +HRH+PK I KAA   R   +  RRK + R  HS PG++ T P RK++++KE+
Sbjct:   34 PQEKAVEYVRALTAAKLEKIFARPFIGALDGHRDGISCMAKNPNYLKGFFSGSMDGDIRLWDIANRRTVCQYSGHQGAVRGLTVSTDGRILVSCGTDCTVKLWNVPVATLTDSDDSTDNSSEPLAVYVWKNS-FWAVDHQWEGDLFATAGAQVDIWNHNRSQPINSFQWGTDTVISVR---FNPAEPNVLATTASDRSITLYDLRMSSPARKVIMRTKSNSISWNPMEPMNFTAANEDCNCYSYDSRKLDEAKCVHMGHESAVMDIDYSPTGREFVTGSYDRTIRIFQYNGGRSREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLHPREQRKHAYHEAVKNRYKHLPEIKRIVRHRHLPKPIYKAASLRRTMMEAERRKAERRKAHSAPGSIVTEPVRKRRIIKEV 451          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18629.5065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIH9_ECTSI1.250e-27589.45Sof1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836C9W7_9STRA2.520e-19564.99WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A024UAB8_9STRA1.930e-17257.40Sof1 domain-containing protein n=11 Tax=Aphanomyce... [more]
A0A418B2S4_9STRA8.990e-16857.40SAM domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A482SJF6_9ARCH2.280e-16557.69Sof1 domain-containing protein n=1 Tax=archaeon Ta... [more]
M4C0L6_HYAAE2.890e-16458.17DDB1- and CUL4-associated factor 13 n=18 Tax=Peron... [more]
A0A6P4ZG13_BRABE1.310e-15653.98DDB1- and CUL4-associated factor 13 n=3 Tax=Branch... [more]
W1P0N3_AMBTC1.670e-15352.27DDB1- and CUL4-associated factor 13 n=3 Tax=Magnol... [more]
A0A8J1UDZ4_OWEFU2.730e-15053.85Ofus.G112908 protein n=1 Tax=Owenia fusiformis Tax... [more]
A0A067DNC0_CITSI9.810e-15051.66DDB1- and CUL4-associated factor 13 n=11 Tax=Sapin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18629contigH-elongata_contig18629:956..7212 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score595.9
Seed ortholog evalue1.1e-167
Seed eggNOG ortholog2880.D7FIH9
Preferred nameDCAF13
KEGG koko:K11806
GOsGO:0000151,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006464,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015630,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0030054,GO:0030331,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031461,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0035257,GO:0035258,GO:0036211,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043687,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0051427,GO:0070013,GO:0071704,GO:0071840,GO:0080008,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EggNOG OGsKOG0268@1,KOG0268@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-28_000340.1
Exons9
Model size1885
Cds size981
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930065.7779903-UTR-H-elongata_contig18629:955..11091622930065.7779903-UTR-H-elongata_contig18629:955..1109Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18629 956..1109 +
1691679267.688142-UTR-H-elongata_contig18629:955..11091691679267.688142-UTR-H-elongata_contig18629:955..1109Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18629 956..1109 +
1622930065.801379-UTR-H-elongata_contig18629:1797..19161622930065.801379-UTR-H-elongata_contig18629:1797..1916Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18629 1798..1916 +
1691679267.700747-UTR-H-elongata_contig18629:1797..19161691679267.700747-UTR-H-elongata_contig18629:1797..1916Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18629 1798..1916 +
1622930065.9622867-UTR-H-elongata_contig18629:6581..72121622930065.9622867-UTR-H-elongata_contig18629:6581..7212Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18629 6582..7212 +
1691679267.780019-UTR-H-elongata_contig18629:6581..72121691679267.780019-UTR-H-elongata_contig18629:6581..7212Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig18629 6582..7212 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930065.8141012-CDS-H-elongata_contig18629:1916..19821622930065.8141012-CDS-H-elongata_contig18629:1916..1982Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 1917..1982 +
1691679267.7141578-CDS-H-elongata_contig18629:1916..19821691679267.7141578-CDS-H-elongata_contig18629:1916..1982Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 1917..1982 +
1622930065.8319502-CDS-H-elongata_contig18629:2267..24521622930065.8319502-CDS-H-elongata_contig18629:2267..2452Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 2268..2452 +
1691679267.7239275-CDS-H-elongata_contig18629:2267..24521691679267.7239275-CDS-H-elongata_contig18629:2267..2452Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 2268..2452 +
1622930065.8524146-CDS-H-elongata_contig18629:3233..33271622930065.8524146-CDS-H-elongata_contig18629:3233..3327Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 3234..3327 +
1691679267.7331715-CDS-H-elongata_contig18629:3233..33271691679267.7331715-CDS-H-elongata_contig18629:3233..3327Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 3234..3327 +
1622930065.8786771-CDS-H-elongata_contig18629:3740..38571622930065.8786771-CDS-H-elongata_contig18629:3740..3857Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 3741..3857 +
1691679267.7411985-CDS-H-elongata_contig18629:3740..38571691679267.7411985-CDS-H-elongata_contig18629:3740..3857Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 3741..3857 +
1622930065.8944733-CDS-H-elongata_contig18629:4396..45901622930065.8944733-CDS-H-elongata_contig18629:4396..4590Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 4397..4590 +
1691679267.7506287-CDS-H-elongata_contig18629:4396..45901691679267.7506287-CDS-H-elongata_contig18629:4396..4590Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 4397..4590 +
1622930065.910929-CDS-H-elongata_contig18629:5062..51881622930065.910929-CDS-H-elongata_contig18629:5062..5188Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 5063..5188 +
1691679267.7580147-CDS-H-elongata_contig18629:5062..51881691679267.7580147-CDS-H-elongata_contig18629:5062..5188Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 5063..5188 +
1622930065.924855-CDS-H-elongata_contig18629:5540..56521622930065.924855-CDS-H-elongata_contig18629:5540..5652Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 5541..5652 +
1691679267.7653286-CDS-H-elongata_contig18629:5540..56521691679267.7653286-CDS-H-elongata_contig18629:5540..5652Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 5541..5652 +
1622930065.9420676-CDS-H-elongata_contig18629:6494..65811622930065.9420676-CDS-H-elongata_contig18629:6494..6581Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 6495..6581 +
1691679267.7726178-CDS-H-elongata_contig18629:6494..65811691679267.7726178-CDS-H-elongata_contig18629:6494..6581Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18629 6495..6581 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18629.5065.1prot_H-elongata_contig18629.5065.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18629 1917..6581 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18629.5065.1

>prot_H-elongata_contig18629.5065.1 ID=prot_H-elongata_contig18629.5065.1|Name=mRNA_H-elongata_contig18629.5065.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=327bp
MSAGDDGIVKQWDLTVTSDLTETPEPTATWMSKSGGFKSLDHHWADGKFA
TAGDSVDLWDHVRAEPTLSYQWGADSINCVRQALFNPAERCLVASTGSSR
EVCLYDTRVSVPMRKVVLKMRSNAVAWNPQEPMNFVCANEDTNLYTFDMR
NLNQALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRTGRSREV
YHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASQRLGATVPREAR
KQQYRNSLKKRFEHMPEVRRIAKHRHVPKIIKKAAEAERVQRDKARRKVD
NRIKHSKPGTVETVPERKQKVVKELT*
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mRNA from alignment at H-elongata_contig18629:956..7212+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18629.5065.1 ID=mRNA_H-elongata_contig18629.5065.1|Name=mRNA_H-elongata_contig18629.5065.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6257bp|location=Sequence derived from alignment at H-elongata_contig18629:956..7212+ (Himanthalia elongata Himel1 dioecious)
CCCTTAAATCAGGCACGAGAGTACACTCGAGCCTTGACAGCGGTAAAGCT GGACAAAATCTTCGCGAAGCCGCTGGTTGGAGCATTGGACGGCCATGGAG ACGGGGTATTCTGCACCGCCACAAGCAGGAGGAGCCTCGTTCAGTTCCTG TCAGGTTTGTTTGCAAATTACCGTGTGAATCGACGTTAAGTGTCGCATCT AGGAGAGGAATACTGAACGGCCCCATCTATTTTCCCGACGGACGCTACAA GCTACACCTACGGGGAAATATCGAGCGGGTATCCACCCATCCTAATATCT TTATACTGTACTGTATTAGACATGTTCCTCTCATACGTATTTATAGCAAG ATATCGTCTTCTCTTATTTCCAGTAGTCAATAAAGTCAATAAAGGAGTTT CGCCCAGACATCGAAGATACGGCCACCGTAGACATCTTTACGACATTCAA CCTGGAAGGGTTTGGTGCTCCAATCCTCGGACATACACTCCTTATAACGT CCGTGTGTTATTAATAGGTGTTTGACATTGACATCGATATTGATATTCCC TAAAATCGTATCGTATCGTATCGTATCGTACATTATCCATCGGATCACAT CATAGGTTTAAGCAATAATCACTATTATAGTGCACAGCTAATATATAATA TATACTAGATACTAGCTAGTTTAGGAGATTATAGAATAGTGTACTGTAGT ATAGTACAGTATAGTATAGTGAGAAAGGTAGGGAGGGAGGGAGGGAGAGA GACCAACGTTTCTATTTCTACTGCATGTAAACAAAAACGAAACAGAGATG TGAGAGATGGTGGCTAACAGGGGTGACGCACGACATCCTCAGGTGCCTGC GACGGGGAAATACGACTATGGGACTTGTCACGGAGAAGTTGCGTCTGGAG GGCGGTAGGGCATAGAGGCTTTGTGCGAGGTCTGTCCGTGACCCCCGACG GCGAGAGCTTCATGTCAGCGGGTGACGATGGAATTGTAAAGCAGTGGGAC CTAACTGTGACCTCCGACCTCACTGAGGTGACTTTTCTAGAGCTGCGCCT CGTCTCGAGCTAAGACGAGTATGTAATTCAGACTAAATACGGCAATACGG CGACCAAATAGCTCGATAGTTCAGTAAGGCGATGACGATGATAAGAAATG CCAGTATTATGGAAGAGCTCGAGGAGGTTGAGCATCCGCATCCGCATGGC TTAGTGTGTTGATGTTGTCTTCCTTTTTAAGTTTTAAGTTTTAAGTTTTT AAAATAATTTTAATAATCATACGGTAAAATATGGATCATTATTTTAATGT TGTGATGCCCAGACGCCGGAACCCACCGCGACTTGGATGAGCAAGTCTGG GGGTTTCAAGTCTCTAGATCACCATTGGGCGGACGGCAAGTTCGCGACAG CGGGAGACTCTGTAGATCTCTGGGATCACGTCAGGGCAGAGCCGACGTTG TCGTATCAATGGGGAGCCGACAGCATTAACTGCGTAAGGCAAGCCTTGTA CAAACGTACGTGATAATATACTATACTACACTACTCTACCTCAGGGAGAG ATCCCCTCCTGTACCGCCCATTTGGTGTCGTACAAAACTAGTACATGTGG TGCAGGTTCGCCATTGTACTGACTACAGCACCCTATCAAGTGTAGCATCA CGTGTAGTGTATCGATTTGGTGTGTGAAGGGAAATGTCGATAATAATGTG TCGCTGGAGGTGTGTGCTATTTCCGTGCTCGACGACAAACGGTTCCTCGG GTGCAGGTGCTCCTAAGCAGACTGTAATTTTTGTAGCTACAATATTGATG AACTGTACCGTGCTGCGCTGTTCTGTTATGTAAATGCCTGTACTTGGCTT ATTGAAGGGATGAAGGGATGTGTGTGGTCATCATATACTAGGTATGACAC AGTACGATGCACGATGCGAGATCATACCTCATTTTTCCTGATGTGGTTAG CGGTTGCGGTTGATCCTCTCTACCCCGACACGGAGAGGATGAGGGGGTCC TAGGATCAGCCCCCCCCTCCCGTTAATGCAGAAAATGGCATGTCAACAAT TACTGCAGATACCTTAGACGTGTTGTCGCGCATGTAGTGTATACTAGATA CACAATGAGAAATAAGGGAGTTCGGAGGGACTCTCACGATGGGAAGGTTG TAACTGGAAAAAATAAAAAATGACTTCGTACGGCAACACGGCAACACCCG ATTGCGTTATGACTGCTATTGCCTTACGGGTGTTCTGGGTTATATTTATT GCAAGTTTGGCATCGTCTGGTGTTCCAGGTTTAACCCCGCTGAACGATGT CTGGTGGCAAGCACGGGGTCTAGCCGAGAAGTGTGTCTGTACGACACGAG GGTTTCAGTGCCCATGCGCAAGGTAAAGTCTGAAATTATACATATACATA CATATAACGCCCTTACCGTACACTGTAATCTAGTTTATAGTCTATAGTAC ACTTTTGTCTAGTCTATAGTCTTATTAAATATTAATAGTACATATACTGT CGGGGAGAGTCTTGACTATCTAGGGAATGACCAGGTCCATTTTGGCAATT TTCTTTCTCCTTCGACATTAATCTCCGACATTAATCTTCGACGTTAATCT TCGACATTAATCGTCGCGAAAGCCAGGTAAGCCAAGCCAATAATTATGTT TGTGTCGACTTTTGGTCATAAAAGTAATATCTACCCTTATATCACTGTTA TACTAGTATCAGTATCAACTCAGTATCAGTATCAGCTATGCCCCCCGCGG TGTTATTGTCATCTGGTTTGTCGACGATGAAACAGGTGGTTTTGAAGATG CGATCGAACGCGGTGGCGTGGAACCCTCAGGAGCCGATGAATTTCGTATG CGCTAACGAAGACACCAACCTGTACACTTTCGACATGCGGAACCTCAACC AGGTCTGTCTACCAGTACACTCTATTAATAGTACTCTCTATTGTTCACTA TACTCTCTATTGTTCACTATTGTTCATTTTTAGTTTCTTTGGGCCTCCCT TTCCGTGTCTCGTCTCTGTTTTCTCTTCTCTGTTCTCTCTTCTGGAATAA TACACCTGTTAGAGTTTTCCCTGTGGCTGAGTTTCTAAAAAAGACGCAAA CATCACTAAATTGTTGTGGGCAAGATACAGTACTAAGGAAAAGCCAATCC TCACTCTAGATCGCGGCTGCGGATTTAAAATCTCGATCAAGTGGACAATA CCTATTACCAATCTGCAGCATGTAACCGCTGCAACTTTCCTCGTTGCTGA AGAGTATATCTGTTATCTGTTCCCGTCTGCATGCCTCTTTCGCCACCAAA CTTAGTGAGTTACTGAGGTCCAATTTTGTCAAACGGTCATCCTGCTCGAC GTTATTTACTCTTCTGTCAATCGGTCACCCTTCCCATCCGTGTGGTCGAT GATGATCCTGTGTATTGAATCTCGAACGGAACGTCCACCAGGCATTGATG ATCCACAAGGACCATGTGTCGGCGGTGATGGATGTATCCTTCTCCCCGAC GGGTCAAGAGTTTGCAAGCGGCTCGTATGACCGCACCGTCAGGGTCTTTC CGCACCGCACCGGCCGCTCGAGAGAGGTCTATCACACCAAGCGCATGCAA CGCGTGTTCTGCGTCAACTTCAGCGCCGATGCCAGGTGTTGTTGGGTGGG GTGGGTGGTATCGGTCCAAGGGGTCGTGGTATCATAAGATCATAAGCGTA TCCGACGGCTTTCACGGAGCCAGTCCGCTGTAGTCAGTTGGTATTGTTTT CATCGCATCCACTGCGTTTAGTGTGAGCTCCAGATGCTCCAGATTTCAAC ACGAGTCTGTGACTGCAGCGCGTGATGTCAACACCTCTCTCTCTCTCACA CCTATCTCTCCCGAATGTGTTGCAAAGAATATGTTACAAGAGGCACTCTC CTCCTCCCGTCAATTCTTGATCTTGGTGATGTTCTTGGTTCTTTCTTTAT TTGTTTTACGTTTTAGCGATGGAGCAAATGATCATGAGAAGTGCAAACCT TCTGTCTGTTTTTTTCTTTTCTTGGGTGTCAACCAAGTGCTTCGTTTTTT CTTGCGCATTGTGTTTTGTTGACGCTTTACCATTCGCGACGGCTACGGCT ACGTCAGGTTCGTAATGACAGGCAGCGATGACACTAACCTTCGGATATGG AAGGCCAACGCGTCTCAAAGACTGGGAGCAACAGTCCCGAGGGAGGCCAG AAAGCAACAGTACCGGAACAGCCTCAAGAAAAGGTATTACAACACTCGAA CCGAACCATAATATTTTCATTTTTACTATCGTTTTTTGAGTATTTCTGAC GGTTGCTCCTCCTCTAAGTCCTGTTTCTTTCGGAAAGGTTTTTGAAGCCG TAGAAAGCCACTTGACGTTCTGTACACGTGTTGAGAATGTGGCGGGTTGT AAAATGTAAATAATCCCAAGAAAGTTTGTCACAAATTTAATCAGTACGAG TACTCGAGGCAAATTTCAAATTTTGGTCCTAATCCTTTGGAAACGGCATG TCACGCTTTGAACAAGTTGCAAAGTATCAAGTGTAAAGAATCAAACAACG CGTAACGTACCGTCTTGTATTGCAACCTACGCCAGGTTCGAACACATGCC CGAAGTGCGACGCATTGCGAAGCATAGACACGTCCCGAAAATCATCAAGA AGGCAGCTGAAGCAGAGCGGGTGCAGAGGGACAAGGCGCGTCGAAAGGTG AAGCACCCTTACTTGAAATTTTTCGGTGGTCGGTATAATGGAGCCGTCCG TTTGAGTTCCGTATGCTAGTGAAATGACGCGAGGTTTTTTGTTTTGCCTC ATTAAGGTCGTTCGGTATACAGAAGATAGAGAGGACGCTGACGCTGATTG TTGGCTGCGATAGTAGAACTCTTTAGAGTAGTATTAGCATTAGTAATATT AACTCTTGAATTGTCTTCAGACAGTCTCAGGCAGCAGACATCAGGCACCC ACCCTTGAGATCAAAATTTGTCGTTATTATAGTGAACTTTTAATAAATAC TGTATATAGCTATGTAAATATCACCAAGAGCTGAGGGGTACATTTGTTGT CACCAGAAGAGGTAAATAAATACAGGGGTATATATACAATACCCTCAAGG TATGTTGACATCTAGGGCTTCCTTCGGACTCTAGGTCTGCCGTGTGGTGC TTCTAGAGCAAGACTTGGACTCGTGCCGTCCCAAGTTTGATATATTGCCC GTTTCCGCGGTTTCGCTTTGGAGCCTGTCGTGGCTGTTCAGCTCGCAATT TTTCCTTACAAATATATGAACTCCTTCAAACCCTCCGAACATCCACACCA TGACATTACCTTCTTAGCACCGTAAGAGGTGTGCAGTCCAGGGGACCAAC TAGGGCGGAAAACTGTCAAGGATGCACCTATTGCTATTTAGCCTCGACCT CAAAATGGACCAATTACGCGACACCTGTAGACTAGAGCTAGAGGTAACTA TACTAGAGGTAGACTAGAGGTATATTTGGCGCAAAACGAGAGTCGACATG GCGAACCTACCTTAATAACCCTCCATATCTTTAAAACAGGTTGACAACCG CATCAAGCACAGCAAGCCAGGGACGGTGGAGACGGTTCCCGAGAGGAAGC AGAAGGTGGTGAAGGAGCTCACGTGACACTTTTACTACCTTTAAATGAAA TGGCATGGTGACGAGGACATGGCTCGTGATTGTCTTGCGATGACTTTATT TTCTTCAACGGCGTTACTTGACTCGACTGTACCCTGTACCCTTTATTGAT TGTACCCTTTATTGAGGCAAGATGCAAAAAGCGTGTCTGTCTATCAACGG CGATGTGTTTTTTTGGTTGTTTGGCTTGACTAACCACGGCTGGGAAAAAC GTCGCCCTCAAGTATAGTACCAACAAGCAAGTCTGGCACTGGGGCTCTCT CAAGGCAGGAAGGTTGATGGTTCCCGAGAGTTGATGGTTGATGGTTGTAT CGCTGCTGATCTAATATAGGAAGGCGAGGTAACAGTGGCAACGTCGCCTA GCTCATACCTCGTAATCGAGTTGGAAAGGGAAATATGTACTCAAATAGTC CACTGGTGATGCACGAGAAGAATCATTGGTCACTTAAATTATATTTTAAC TAGTTGGTATTAAATAGTTGAATGCTTCAATTATCACATAAGCTGATGTC AAAATCCAGCCCGTGGTCAGAAGGTAAAAAAAACACACACCATCCGGAAG GAAAAAAACGTTCAAGGAACTCTCCAATACAAAAGGAAACGAAAATAATC GTGCACA
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Coding sequence (CDS) from alignment at H-elongata_contig18629:956..7212+

>mRNA_H-elongata_contig18629.5065.1 ID=mRNA_H-elongata_contig18629.5065.1|Name=mRNA_H-elongata_contig18629.5065.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1962bp|location=Sequence derived from alignment at H-elongata_contig18629:956..7212+ (Himanthalia elongata Himel1 dioecious)
ATGTCAGCGGGTGACGATGGAATTGTAAAGCAGTGGGACCTAACTGTGAC
CTCCGACCTCACTGAGATGTCAGCGGGTGACGATGGAATTGTAAAGCAGT
GGGACCTAACTGTGACCTCCGACCTCACTGAGACGCCGGAACCCACCGCG
ACTTGGATGAGCAAGTCTGGGGGTTTCAAGTCTCTAGATCACCATTGGGC
GGACGGCAAGTTCGCGACAGCGGGAGACTCTGTAGATCTCTGGGATCACG
TCAGGGCAGAGCCGACGTTGTCGTATCAATGGGGAGCCGACAGCATTAAC
TGCGTAAGGCAAGCCTTACGCCGGAACCCACCGCGACTTGGATGAGCAAG
TCTGGGGGTTTCAAGTCTCTAGATCACCATTGGGCGGACGGCAAGTTCGC
GACAGCGGGAGACTCTGTAGATCTCTGGGATCACGTCAGGGCAGAGCCGA
CGTTGTCGTATCAATGGGGAGCCGACAGCATTAACTGCGTAAGGCAAGCC
TTGTTTAACCCCGCTGAACGATGTCTGGTGGCAAGCACGGGGTCTAGCCG
AGAAGTGTGTCTGTACGACACGAGGGTTTCAGTGCCCATGCGCAAGGTTT
AACCCCGCTGAACGATGTCTGGTGGCAAGCACGGGGTCTAGCCGAGAAGT
GTGTCTGTACGACACGAGGGTTTCAGTGCCCATGCGCAAGGTGGTTTTGA
AGATGCGATCGAACGCGGTGGCGTGGAACCCTCAGGAGCCGATGAATTTC
GTATGCGCTAACGAAGACACCAACCTGTACACTTTCGACATGCGGAACCT
CAACCAGGTGGTTTTGAAGATGCGATCGAACGCGGTGGCGTGGAACCCTC
AGGAGCCGATGAATTTCGTATGCGCTAACGAAGACACCAACCTGTACACT
TTCGACATGCGGAACCTCAACCAGGCATTGATGATCCACAAGGACCATGT
GTCGGCGGTGATGGATGTATCCTTCTCCCCGACGGGTCAAGAGTTTGCAA
GCGGCTCGTATGACCGCACCGTCAGGGTCTTTCCGCACCGCACCGGCCGC
TCGAGAGAGGTCTATCACACCAAGCGCATGCAACGCGTGTTCTGCGTCAA
CTTCAGCGCCGATGCCAGGCATTGATGATCCACAAGGACCATGTGTCGGC
GGTGATGGATGTATCCTTCTCCCCGACGGGTCAAGAGTTTGCAAGCGGCT
CGTATGACCGCACCGTCAGGGTCTTTCCGCACCGCACCGGCCGCTCGAGA
GAGGTCTATCACACCAAGCGCATGCAACGCGTGTTCTGCGTCAACTTCAG
CGCCGATGCCAGGTTCGTAATGACAGGCAGCGATGACACTAACCTTCGGA
TATGGAAGGCCAACGCGTCTCAAAGACTGGGAGCAACAGTCCCGAGGGAG
GCCAGAAAGCAACAGTACCGGAACAGCCTCAAGAAAAGGTTCGTAATGAC
AGGCAGCGATGACACTAACCTTCGGATATGGAAGGCCAACGCGTCTCAAA
GACTGGGAGCAACAGTCCCGAGGGAGGCCAGAAAGCAACAGTACCGGAAC
AGCCTCAAGAAAAGGTTCGAACACATGCCCGAAGTGCGACGCATTGCGAA
GCATAGACACGTCCCGAAAATCATCAAGAAGGCAGCTGAAGCAGAGCGGG
TGCAGAGGGACAAGGCGCGTCGAAAGGTTCGAACACATGCCCGAAGTGCG
ACGCATTGCGAAGCATAGACACGTCCCGAAAATCATCAAGAAGGCAGCTG
AAGCAGAGCGGGTGCAGAGGGACAAGGCGCGTCGAAAGGTTGACAACCGC
ATCAAGCACAGCAAGCCAGGGACGGTGGAGACGGTTCCCGAGAGGAAGCA
GAAGGTGGTGAAGGAGCTCACGTGAGTTGACAACCGCATCAAGCACAGCA
AGCCAGGGACGGTGGAGACGGTTCCCGAGAGGAAGCAGAAGGTGGTGAAG
GAGCTCACGTGA
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