mRNA_H-elongata_contig186238.5062.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig186238.5062.1 vs. uniprot
Match: A0A6H5JYW1_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYW1_9PHAE) HSP 1 Score: 233 bits (593), Expect = 5.140e-72 Identity = 116/229 (50.66%), Postives = 156/229 (68.12%), Query Frame = 1
Query: 1 FTDDDYWYMVMELAAGGDLYDRLTTAGVYLEDEEIRRILREAAGALAHMHDRGIVHGDIKPENILLKTPVTTA---------------------------PGRGVRKILLADFGSSFRLTVPHSTGNQAVKSCTPAYSAPEVVQNERTLDEKVDVWSLGVIAFIMCKGYHPFDPTSEATGEEIIQRVATSDPDWDGLEPQAANLIRQMLSRNPKNRPSAREVLDNAWLQ 606
+ D+D WY+VMELA GG+L+DRLTT G+ L+D ++R +LR+ A A+A +H+ IVHGD+KPEN+LL T + G V K+LLADFGSSFRL G++ VK T AYSAPEVV+N +D+K DVWSLGVIA+++ G+HPFDPTSEA EEI + + S+PDW+G++ +AA LIR+MLSRNP++RPSA+EVL ++WLQ
Sbjct: 177 YADEDCWYLVMELAEGGELFDRLTTEGLALDDGDVRSLLRDTAKAIAFLHEHSIVHGDVKPENMLLAAAATGSGDESRRTGGNQISEAAAVAETEQSAGEAGGSVGKVLLADFGSSFRLR--GGRGHKKVKEYTIAYSAPEVVENSAEVDQKADVWSLGVIAYVLVVGHHPFDPTSEADDEEITESILHSEPDWEGVDLKAATLIRRMLSRNPEDRPSAQEVLQSSWLQ 403
BLAST of mRNA_H-elongata_contig186238.5062.1 vs. uniprot
Match: A0A835Z8F3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8F3_9STRA) HSP 1 Score: 157 bits (397), Expect = 7.420e-43 Identity = 83/201 (41.29%), Postives = 127/201 (63.18%), Query Frame = 1
Query: 13 DYWYMVMELAAGGDLYDRLTTAGVYLEDEEIRRILREAAGALAHMHDRGIVHGDIKPENILLKTPVTTAPGRGVRKILLADFGSSFRLTVPHSTGNQAVKSCTPAYSAPEVVQNERTLDEKVDVWSLGVIAFIMCKGYHPFDPTSEATGEEIIQRVATSDPDWDG-----LEPQAANLIRQMLSRNPKNRPSAREVLDNAW 600
D +Y+VMELA GG+L+ RL + G + E E R I+ E A+ H+H +G+VH DIKPENI+L+ + P +++LADFGS+F H TG+ + T AYSAPEV+ +DEK D+WS+GV+ +++ G HPFD EE+ +R+ +PD++ + P A +L+R+M+S++ + RPSA+E L +AW
Sbjct: 191 DSFYIVMELAQGGELFRRLQSHGRFTEGEAAR-IMAEILQAVEHLHSQGVVHFDIKPENIILRHGDSMIP-----EVMLADFGSAFSKN--HVTGS---RDYTAAYSAPEVLLRSCAIDEKADIWSMGVLMYVLLSGRHPFDTHLHQDDEEVERRIVGKEPDYNAHAMRHVGPVAKDLLRRMMSKDRRQRPSAKEALSHAW 380
BLAST of mRNA_H-elongata_contig186238.5062.1 vs. uniprot
Match: A0A835ZES4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES4_9STRA) HSP 1 Score: 154 bits (390), Expect = 5.150e-42 Identity = 83/205 (40.49%), Postives = 122/205 (59.51%), Query Frame = 1
Query: 7 DDDYWYMVMELAAGGDLYDRLTTAGVYLEDEEIRRILREAAGALAHMHDRGIVHGDIKPENILLKTPVTTAPGRGVRKILLADFGSSFRLTVPHSTGNQAVKSCTPAYSAPEVVQNERTLDEKVDVWSLGVIAFIMCKGYHPFDPTSEATGEEIIQRVATSDPD-----WDGLEPQAANLIRQMLSRNPKNRPSAREVLDNAWLQ 606
D WY+VMELA G +LYDRL T G+ L + +L++ AL ++H GI HGDIKPENI++ + G V+ LADFGS+FR + + T AYS PEVV E DV+SLGV+A+I+ G HPFDP+ +A+ E+++ R+ + +PD W ++ A +L+R+ LS+ P RP+A +L + W+Q
Sbjct: 158 DQSSWYIVMELARGVELYDRLVTRGM-LSQAQSSALLKQLLDALVYLHRCGITHGDIKPENIIVNDDDDSNGGLTVK---LADFGSAFRTRA--GVPRRKDYTTTAAYSPPEVVSGAAAATEAADVFSLGVVAYILLTGRHPFDPSGDASEEDVLARIVSDEPDFSDAAWGDVDAAARDLVRRALSKAPSARPTASAMLAHPWVQ 356
BLAST of mRNA_H-elongata_contig186238.5062.1 vs. uniprot
Match: A0A067D0Z4_SAPPC (CAMK protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D0Z4_SAPPC) HSP 1 Score: 153 bits (387), Expect = 5.460e-42 Identity = 82/206 (39.81%), Postives = 127/206 (61.65%), Query Frame = 1
Query: 4 TDDDYWYMVMELAAGGDLYDRLTTAGVYLEDEEIRRILREAAGALAHMHDRGIVHGDIKPENILLKTPVTTAPGRGVRKILLADFGSSFRLTVPHSTGNQAVKSCTPAYSAPEVVQNERTLDEKVDVWSLGVIAFIMCKGYHPFDPTSEATGEEIIQRVATSDPD-----WDGLEPQAANLIRQMLSRNPKNRPSAREVLDNAWLQ 606
T +DY +V E GG+L+DRL + G Y E + + + RE + AL H+H R +VH D+KPENILL++ +A +++L DFG SF + ++ ++ S T AY+APEV++ E T+ +D+W+LGV+ F++ GYHPFDPT+EA+ ++ +R+ D W + A +LIRQ+L + NRPSA VL + W+Q
Sbjct: 137 TPEDY-VLVTEYIQGGELFDRLLSHGTYSE-AQAKALTREISSALQHLHARNVVHADVKPENILLQSKNDSA------RMILIDFGLSFHVN-DRASNHRWDGSGTMAYAAPEVLKKE-TISSAIDMWALGVVLFVLLAGYHPFDPTNEASDRDLRERIIAGQYDFNHDAWTNVSSDAKDLIRQLLQVDAANRPSATSVLTHPWMQ 332
BLAST of mRNA_H-elongata_contig186238.5062.1 vs. uniprot
Match: A0A4D9CX25_9STRA (cGMP-dependent protein kinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CX25_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.360e-41 Identity = 85/211 (40.28%), Postives = 127/211 (60.19%), Query Frame = 1
Query: 1 FTDDDYWYMVMELAAGGDLYDRLTTAGVYLEDEEIRRILREAAGALAHMHDRGIVHGDIKPENILLKTPVTTAPGRGVRKILLADFGSSFRLTVPHSTGNQAVKSCTP--AYSAPEVVQNERTLDEKVDVWSLGVIAFIMCKGYHPFDPTSEATGEEIIQR--------VATSDPDWDGLEPQAANLIRQMLSRNPKNRPSAREVLDNAWL 603
F D++ WY+VME+A GG+L+DRL G Y E + I+RE A++++H +GIVH D+KPEN+LL T + + L DFGS+FR +G K T AYSAPEV+ R K DVW+LGV+ +I+ GYHPFDP ++A ++I R V+ P W+ + PQA L++++LS + + RP+A+E+L + W+
Sbjct: 205 FQDEENWYIVMEMAEGGELFDRLVERGAYSE-AQASEIMREIVDAVSYLHQQGIVHCDLKPENLLLATKASDTSN-----MRLVDFGSAFRA----DSGKLVSKKGTGTIAYSAPEVISG-RPCGYKADVWALGVLMYILLSGYHPFDPLNDANDDQIGARIVKEKEKYVSFEQPVWERISPQAKMLVKRLLSSDAQTRPTAQELLHDPWI 404
BLAST of mRNA_H-elongata_contig186238.5062.1 vs. uniprot
Match: A0A7S2XVS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVS7_9STRA) HSP 1 Score: 152 bits (384), Expect = 5.570e-40 Identity = 87/211 (41.23%), Postives = 126/211 (59.72%), Query Frame = 1
Query: 1 FTDDDYWYMVMELAAGGDLYDRLTTAGVYLEDEEIRRILREAAGALAHMHDRGIVHGDIKPENILLKTPVTTAPGRGVRKILLADFGSSFRLTVPHSTGNQAVKSCTPAYSAPEVVQNERTLDEKVDVWSLGVIAFIMCKGYHPFDPTSEATGEEIIQRVATSD-----PDWDGLEPQAANLIRQMLSRNPKNRPSAREVLDNAWLQLPLN 618
F ++ +Y+VME+A GG+L+D L G+Y E +E R L E AL ++H +GIVH D+KPENILL A I LADFGS+F L+ + A T AYSAPEV++ + D + D+WSLGV+ FI+ G HPFDP AT E++ +RV + DW PQA +L++++L+ + RP+A EVL++ W Q ++
Sbjct: 165 FVGENNFYIVMEMATGGELFDHLVNHGMYSE-QEARDFLMELLEALKYLHSQGIVHFDLKPENILL------ASSGSRLDIRLADFGSAFFLSDLDDSPKNAPTG-TVAYSAPEVLRG-KVHDARCDLWSLGVLLFIILTGVHPFDPDHTATDEKVKERVLKGELHFDEEDWREFSPQAKDLVKRLLTFDVDKRPTAEEVLEHPWFQSEVS 366
BLAST of mRNA_H-elongata_contig186238.5062.1 vs. uniprot
Match: A0A329S8G8_9STRA (Protein kinase domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=A0A329S8G8_9STRA) HSP 1 Score: 145 bits (366), Expect = 3.310e-39 Identity = 82/206 (39.81%), Postives = 120/206 (58.25%), Query Frame = 1
Query: 1 FTDDDYWYMVMELAAGGDLYDRLTTAGVYLEDEEIRRILREAAGALAHMHDRGIVHGDIKPENILLKTPVTTAPGRGVRKILLADFGSSFRLTVPHSTGNQAVKSCTPAYSAPEVVQNERTLDEKVDVWSLGVIAFIMCKGYHPFDPTSEATGEEIIQRVATSDPD-----WDGLEPQAANLIRQMLSRNPKNRPSAREVLDNAWL 603
F D + +V EL GG+LYD L GV+ E E + ++RE A L ++H + +VH D+KPENILL K+ L DFG SFRL H + + CT AY++PEV+++ R +DVW+LGV+ +I+ G HPFDPT +A+ EE+ QR+ + D W + A +LIR ML+ +P+ R SA +VL + W+
Sbjct: 107 FETSDAYVLVTELVQGGELYDDLVENGVFGE-ERAKDLVRELAVTLEYLHSKRVVHADLKPENILLAND----------KMKLIDFGQSFRL---HGDNGRKMDVCTTAYASPEVMKH-RESGCAMDVWALGVVLYIVLCGTHPFDPTDDASDEELQQRILKGEVDCDSVGWACMSDSARDLIRSMLTVDPEKRISASQVLQHEWI 297
BLAST of mRNA_H-elongata_contig186238.5062.1 vs. uniprot
Match: W7TAW9_9STRA (Calcium calmodulin-dependent protein kinase i n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAW9_9STRA) HSP 1 Score: 148 bits (373), Expect = 5.660e-39 Identity = 81/203 (39.90%), Postives = 121/203 (59.61%), Query Frame = 1
Query: 1 FTDDDYWYMVMELAAGGDLYDRLTTAGVYLEDEEIRRILREAAGALAHMHDRGIVHGDIKPENILLKTPVTTAPGRGVRKILLADFGSSFRLTVPHSTGNQAVKSCTP--AYSAPEVVQNERTLDEKVDVWSLGVIAFIMCKGYHPFDPTSEATGEEIIQR--------VATSDPDWDGLEPQAANLIRQMLSRNPKNRPSAR 579
F D++ WY+VME+A GG+L+DRL G Y E + I+RE A++++H +GIVH D+KPEN+LL T + + L DFGS+FR +G K T AYSAPEV+ R K DVW+LGV+ +I+ GYHPFDP ++A ++I R V+ P W+ + P+A L++++LS + + RP+A+
Sbjct: 248 FQDEENWYIVMEMAEGGELFDRLVERGAYSE-AQASEIMREIVDAVSYLHQQGIVHCDLKPENLLLATKASDTSN-----MRLVDFGSAFRA----DSGKLVSKKGTGTIAYSAPEVISG-RPCGYKADVWALGVLMYILLSGYHPFDPLNDANDDQIGARIVKEKEKYVSFEQPVWERISPEAKMLVKRLLSSDAQTRPTAQ 439
BLAST of mRNA_H-elongata_contig186238.5062.1 vs. uniprot
Match: A0A0W8CE03_PHYNI (Serine/threonine-protein kinase DCLK3 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CE03_PHYNI) HSP 1 Score: 144 bits (362), Expect = 6.530e-39 Identity = 81/206 (39.32%), Postives = 118/206 (57.28%), Query Frame = 1
Query: 1 FTDDDYWYMVMELAAGGDLYDRLTTAGVYLEDEEIRRILREAAGALAHMHDRGIVHGDIKPENILLKTPVTTAPGRGVRKILLADFGSSFRLTVPHSTGNQAVKSCTPAYSAPEVVQNERTLDEKVDVWSLGVIAFIMCKGYHPFDPTSEATGEEIIQRVATSDPD-----WDGLEPQAANLIRQMLSRNPKNRPSAREVLDNAWL 603
F D + +V EL GG+LYD L GV+ E E + ++ E A L ++H + +VH D+KPENI L K+ L DFG SFRL H + + CT AY++PEV+ +R +DVW+LGV+ +I+ G HPFDPT +AT +E+ QR+ + D W + A +LIR+ML+ +PK R SA +VL + W+
Sbjct: 79 FETSDAYVLVTELVQGGELYDDLVENGVFGE-ERAKELVHELAVTLEYLHSKRVVHADLKPENIXLAND----------KLKLIDFGQSFRL---HDDNGRKMDVCTTAYASPEVM-GQRESGCAMDVWALGVVLYIVLCGTHPFDPTDDATDDELQQRILKGEFDCDSVGWACMSDSARDLIRRMLTVDPKKRISATQVLQHEWV 269
BLAST of mRNA_H-elongata_contig186238.5062.1 vs. uniprot
Match: A0A835ZCD7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD7_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.050e-38 Identity = 83/225 (36.89%), Postives = 125/225 (55.56%), Query Frame = 1
Query: 1 FTDDDYWYMVMELAAGGDLYDRLTTAGVYLEDEEIRRILREAAGALAHMHDRGIVHGDIKPENILLKTPVT-----------------TAPGRGVRKILLADFGSSFRLTVPHSTGNQAVK--SCTPAYSAPEVVQNERTLDEKVDVWSLGVIAFIMCKGYHPFDPTSEATGEEIIQRVATSDPD-----WDGLEPQAANLIRQMLSRNPKNRPSAREVLDNAWL 603
+ D WY+VMELA G +LY+RL T G+ L + R +L + A A+AH+H VH DIKPEN+LL ++ G G+ + L DFGS+FR+ TG K S T YS PEVV DVW+LGV+A+I+ G HPFDP+ + E+++RV +++PD WD ++ A +L++ L+++P RP+A ++L + W+
Sbjct: 64 YADAGAWYIVMELARGRELYERLVTQGM-LTQAQARAVLHQLACAVAHLHAHATVHADIKPENVLLHEEEEDNAAASAEQRCGDGGSGSSGGSGL-SVKLVDFGSAFRV----GTGPPKRKEWSYTAVYSPPEVVAGTAEASAAGDVWALGVVAYILLLGVHPFDPSGDTCEAEVLRRVVSAEPDYDDPAWDLIDAGAKDLVQGALNKDPALRPTAAQLLAHPWV 282 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig186238.5062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig186238.5062.1 >prot_H-elongata_contig186238.5062.1 ID=prot_H-elongata_contig186238.5062.1|Name=mRNA_H-elongata_contig186238.5062.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp MVMELAAGGDLYDRLTTAGVYLEDEEIRRILREAAGALAHMHDRGIVHGDback to top mRNA from alignment at H-elongata_contig186238:78..1112+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig186238.5062.1 ID=mRNA_H-elongata_contig186238.5062.1|Name=mRNA_H-elongata_contig186238.5062.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1035bp|location=Sequence derived from alignment at H-elongata_contig186238:78..1112+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig186238:78..1112+ >mRNA_H-elongata_contig186238.5062.1 ID=mRNA_H-elongata_contig186238.5062.1|Name=mRNA_H-elongata_contig186238.5062.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig186238:78..1112+ (Himanthalia elongata Himel1 dioecious)back to top |