prot_H-elongata_contig18611.5056.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18611.5056.1
Unique Nameprot_H-elongata_contig18611.5056.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length332
Homology
BLAST of mRNA_H-elongata_contig18611.5056.1 vs. uniprot
Match: D8LQ08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ08_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 1.820e-103
Identity = 179/343 (52.19%), Postives = 235/343 (68.51%), Query Frame = 0
Query:    1 QSYLQVRAIVLIMVGLLMAGLSIIGCVGTHRQKKRDCAWGGRRTLSLFQLLLLAMIVGQGVVLIHVYRIEVNLEEAAEELPEEYGEFEDRFRVGFNEAYFDQICGDE--GESWMLSLVNDNCPSTISEEVCSCSVYPPEEGVPASCSVLETFTLDECCPDEDLCEAGTEASCPYSGCRTGVLKLLMIFITPARNYAIFALALEGGILILTCLLICYNPRDSTEDILLKTGALVRM---PSEIPGLTQGEPELSATGAGGKTLKTNNGGSFRNHFVQPAVVE-AGEVKRTRSNSKEG----NPARPTLDSSPIA-HDLPGEPLRQFMTPRVVGNRIIYGPVSPG 332
            Q+Y+Q   I+ +MVG+L+A +SIIGCVGT+RQ +RD  W GRR LSL+QL+L+A++VGQGVV + +Y IEV+LEEAA +LP ++GEFE RFR GFNEAYF+Q+C     G+SW+ SLV D+CP  IS + CSCS      G+PA CS  ET++ + CCPDE+ CEAG E +CPY+ CRTG+L++L+ +ITPAR Y+ F   LEG +LILTCLLICYNPRDSTEDIL+KTG ++R    P E  G   GEP+       G      N      H ++  +V+ AG V+R  +  K G    +P R T   SP+A  ++P EPL QF+TP+  GNRI YGP S G
Sbjct:   43 QTYMQTLGIITMMVGILVAAMSIIGCVGTNRQIERDRLWSGRRILSLYQLILVAVVVGQGVVQMRLYSIEVSLEEAAADLPIQHGEFEGRFREGFNEAYFEQLCSASAGGDSWVWSLVEDHCPDAISRDACSCSDILDGSGLPARCSTPETYSAEGCCPDEEFCEAGKEEACPYAPCRTGILEVLLSYITPARKYSTFVFVLEGMVLILTCLLICYNPRDSTEDILIKTGTIMRQHHKPGEGGG---GEPDSQVGDLEGAPGGAKNPAGASIHALRLDLVQPAGAVRRAGAAGKRGAAGGSPDRATPAMSPMAVENIPTEPLSQFLTPKRGGNRITYGPDSGG 382          
BLAST of mRNA_H-elongata_contig18611.5056.1 vs. uniprot
Match: A0A812W7H9_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W7H9_SYMMI)

HSP 1 Score: 124 bits (311), Expect = 1.250e-29
Identity = 78/232 (33.62%), Postives = 125/232 (53.88%), Query Frame = 0
Query:    9 IVLIMVGLLMAGLSIIGCVGTHRQKKRDCAWGGRRTLSLFQLLLLAMIVGQGVVLIHVYRIEVNLEEAAEELPE-----EYGEFEDRFRVGFNEAYFDQI--CGDEGESWMLSLVNDNCPSTISEEVCSCSVYPPEEGVPASCSVLETFTLDECCPDEDLC--EAGTEASCPYSGCRTGVLKLLMIFITPARNYAIFALAL-EGGILILTCLLICYNPRDSTEDILLKTGAL 230
            IV+I+  +L+  +S++GC+G   Q ++   W GRR L+L+QL LLA I+G   ++  +  +   L+    +L       +YG FE+     FNE +F     C D   +W  S V+D+CP +I +               A C     +++  C  DEDLC  ++G    CPY  CR GVL  L+ ++ P  N A+  +A+ +  I++LTC+LICY P+D+ E +L+KTG +
Sbjct:   51 IVVILFSVLILMISLLGCMGVSHQSEQLSCWTGRRILALYQLSLLATIIGNLWMVTKLIILVRGLDATYSDLTSADDTVDYGRFEEAVADRFNEFFFSAAATCTDSKYAWFWSWVDDHCPVSIGQ---------------ARCMACGDYSVTTCPADEDLCYAQSGGMDKCPYDQCRAGVLDYLISYMEPL-NVALLVIAVFQLCIMVLTCMLICYTPQDTVEQMLVKTGTI 266          
BLAST of mRNA_H-elongata_contig18611.5056.1 vs. uniprot
Match: K0TPL8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TPL8_THAOC)

HSP 1 Score: 121 bits (304), Expect = 1.080e-28
Identity = 75/216 (34.72%), Postives = 113/216 (52.31%), Query Frame = 0
Query:   22 SIIGCVGTHRQKKRDCAWGGRRTLSLFQLLLLAMIVGQGVVLIHVYRIEVNLEEAAEELPEEYGEFEDRFRVGFNEAYFDQICGDEGES---WMLSLVNDNCPSTISEEVCSCSVYPPEEGVPASCSVLE--TFTLDE--CCPDEDLCEAGTEASCPYSGCRTGVLKLLMIFITPARNYAIFALALEGGILILTCLLICYNPRDSTEDILLKTGAL 230
            S  GC G  RQ KR   + GR+ L L QLLL+A++V     L    ++  ++     +  ++Y  FE+R  V F+  YF  +C     +   W+   V+ NCP  +    C+ S     +    +C  L+  T    E  CCP ++LC++G E++CPY  CR  +   L  F+ PA+  A  ++A  G +++L+ LLICYNPRDS E  L KTG L
Sbjct:   18 SFYGCNGALRQTKRKGCFAGRKILCLHQLLLIAVLVFAFANLEWTTKLHRSVRSFLRDPSQDYNGFEERLSVFFDGEYFKSLCSSNDSTAGDWLEKFVSANCPQQMKPTACALSGRK-RDMCDTTCYALQGDTDRFQELGCCPSKELCQSGFESACPYDMCRLEIFHELSKFVGPAKVSAQASVAASGLMIVLSILLICYNPRDSIEIELYKTGVL 232          
BLAST of mRNA_H-elongata_contig18611.5056.1 vs. uniprot
Match: A0A7S2G7W8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7W8_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.540e-23
Identity = 68/228 (29.82%), Postives = 110/228 (48.25%), Query Frame = 0
Query:    8 AIVLIMVGLLMAGLSIIGCVGTHRQKKRDCAWGGRRTLSLFQLLLLAMIVGQGVVLIHVYRIEVNLEEAAEELPE-------EYGEFEDRFRVGFNEAYFDQICGDEGESWMLSLVNDNCPSTISEEVCSCSVYPPEEGVPASCSVLETFTLDECCPDEDLCEAGTEASCPYSGCRTGVLKLLMIFITPARNYAIFALALEGGILILTCLLICYNPRDSTEDILLKTG 228
            A +LI  G+++  + + GC G   Q++R  +  GRR LS +Q+ LL +I  Q    +++     +L+    EL         EY + E      FN+ YFD + G + + +    V+++CP +       C+V              +++     CPDE  C+ G  A CPY  CR   +   +  + P   Y IF    E  ++ILTC LIC+NPRD+ + IL+K+G
Sbjct:   71 ATILISTGVVILIIVMCGCFGAVYQEQRTGSCRGRRLLSFYQICLLTLIGLQFYTTVYMLNTAESLQAVKGELASAKSNVTVEYVDAERSLSTKFNDYYFDTVTGSQ-DGYFWKFVDESCPKSSGMGSDDCNV--------------DSYATT--CPDEASCDDGASAQCPYDLCRRAAVTRFLGIVEPIGEYGIFVCIFETALMILTCCLICFNPRDAEQTILMKSG 281          
BLAST of mRNA_H-elongata_contig18611.5056.1 vs. uniprot
Match: W7U843_9STRA (Tetraspanin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U843_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.560e-23
Identity = 77/228 (33.77%), Postives = 108/228 (47.37%), Query Frame = 0
Query:   13 MVGLLMAGLSIIGCVGTHRQKKRDCAWGGRRTLSLFQLLLLAMIVGQGVVLIHVYRIEVNLEEAAEELPEEYGEFEDRFRVG-FNEAYFDQ----ICGDEGES----WMLSLVNDNCPSTISEEVCSCSVYPPEEGVPASCSVLETFTLDECCPDEDLCEAGTEASCPYSGCRTGVLKLLMIFITPARNYAIFALALEGGILILTCLLICYNPRDSTEDILLKTGALV 231
            +VGL +  LS +GC G  RQ  R    GGRR LSL+QLLLL ++       + +  +   +    +     Y   E    V  FN  YF      +   +G +    W       +CP ++    C+      + G     SV  T   D CCP +DLC AG   +CPY  CR GV + L   +   + Y  F L L+  +LI TC+LICYNPRDS  ++L KTG ++
Sbjct:  105 LVGLGLVFLSCLGCFGVKRQIVRVGPCGGRRLLSLYQLLLLGLLFAFTTAFLAMRTLHTQVPLLLDNPDAVYARSEQNLLVPYFNRLYFKTRKAAVRAHDGGAGSFNWFADWTRQSCPLSMDVGTCTSCGTDGDGGT----SVPYT---DGCCPRDDLCTAGNLDACPYHRCRLGVARFLSKRLGALQKYLNFLLILQLIVLISTCMLICYNPRDSFAELLAKTGVVI 325          
BLAST of mRNA_H-elongata_contig18611.5056.1 vs. uniprot
Match: A0A6H5JEQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEQ5_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.720e-14
Identity = 58/135 (42.96%), Postives = 71/135 (52.59%), Query Frame = 0
Query:  204 ILILTCLLICYNPRDSTEDILLKTGALVRMPSEIPGLTQGEP------ELSATGAGGKTLKTNNGGSFRNHFVQPAVVEAGEVKRTRSNSKEGNPARPTLDSSPIAHDLPGEPLRQFMTPRVVGNRIIYGPVSPG 332
            +LILTCLLICYNPRDSTEDIL+KTG +VR   + PG   GE       +L  T  G K     +  + R   VQPA          +  +  G+P R T   SP+A       +  F+TPR  GNRI YGP S G
Sbjct:    2 VLILTCLLICYNPRDSTEDILIKTGTIVRQQHK-PGERGGEEPGSQAGDLEGTPGGAKNPAGASIHALRLDLVQPAGAARRAGAVGKRGAAGGSPDRSTPAMSPMA-------VENFLTPRRGGNRITYGPDSDG 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18611.5056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LQ08_ECTSI1.820e-10352.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A812W7H9_SYMMI1.250e-2933.62Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
K0TPL8_THAOC1.080e-2834.72Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2G7W8_9STRA2.540e-2329.82Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W7U843_9STRA2.560e-2333.77Tetraspanin n=1 Tax=Nannochloropsis gaditana TaxID... [more]
A0A6H5JEQ5_9PHAE1.720e-1442.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 215..332
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..192
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 192..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18611contigH-elongata_contig18611:2812..6487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18611.5056.1mRNA_H-elongata_contig18611.5056.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18611 2812..6487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18611.5056.1 ID=prot_H-elongata_contig18611.5056.1|Name=mRNA_H-elongata_contig18611.5056.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=332bp
QSYLQVRAIVLIMVGLLMAGLSIIGCVGTHRQKKRDCAWGGRRTLSLFQL
LLLAMIVGQGVVLIHVYRIEVNLEEAAEELPEEYGEFEDRFRVGFNEAYF
DQICGDEGESWMLSLVNDNCPSTISEEVCSCSVYPPEEGVPASCSVLETF
TLDECCPDEDLCEAGTEASCPYSGCRTGVLKLLMIFITPARNYAIFALAL
EGGILILTCLLICYNPRDSTEDILLKTGALVRMPSEIPGLTQGEPELSAT
GAGGKTLKTNNGGSFRNHFVQPAVVEAGEVKRTRSNSKEGNPARPTLDSS
PIAHDLPGEPLRQFMTPRVVGNRIIYGPVSPG
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