prot_H-elongata_contig106209.504.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig106209.504.1
Unique Nameprot_H-elongata_contig106209.504.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
BLAST of mRNA_H-elongata_contig106209.504.1 vs. uniprot
Match: UPI000854CB02 (poly [ADP-ribose] polymerase 12-like n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854CB02)

HSP 1 Score: 52.8 bits (125), Expect = 6.630e-7
Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 MIMAKVLVGKFIMGNSNMVRPPLLRDSGGHRTYDTTVDNVNTPKIFV 47
            M +A+VLVG F++G+S+M RPPL R+  G + YD+ VDN+  P IFV
Sbjct:  134 MFVARVLVGDFVVGDSSMRRPPLKRN--GTQIYDSCVDNIRDPSIFV 178          
BLAST of mRNA_H-elongata_contig106209.504.1 vs. uniprot
Match: A0A7K5HG75_CROSL (Poly [ADP-ribose] polymerase (Fragment) n=1 Tax=Crotophaga sulcirostris TaxID=33598 RepID=A0A7K5HG75_CROSL)

HSP 1 Score: 51.6 bits (122), Expect = 1.840e-6
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 MIMAKVLVGKFIMGNSNMVRPPLLRDSGGHRTYDTTVDNVNTPKIFV 47
            M +AKVLVG+F+ GNS  VRPP  + S  +R YD+ V+N+  P IFV
Sbjct:  138 MFVAKVLVGEFVQGNSEYVRPPP-KPSNSNRFYDSCVNNLTDPSIFV 183          
BLAST of mRNA_H-elongata_contig106209.504.1 vs. uniprot
Match: A0A674CPF9_SALTR (PARP catalytic domain-containing protein n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A674CPF9_SALTR)

HSP 1 Score: 50.1 bits (118), Expect = 1.980e-6
Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 MIMAKVLVGKFIMGNSNMVRPPLLRDSGGHRTYDTTVDNVNTPKIFV 47
            M + +VLVG +  GNS+ VRPP  +++GG   YD+ VDN+  PK+FV
Sbjct:    1 MFVCRVLVGDYTEGNSSYVRPPP-KETGGSIFYDSCVDNIKDPKVFV 46          
BLAST of mRNA_H-elongata_contig106209.504.1 vs. uniprot
Match: A0A3P8VCA7_CYNSE (TCDD-inducible poly [ADP-ribose] polymerase-like n=2 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8VCA7_CYNSE)

HSP 1 Score: 51.6 bits (122), Expect = 2.920e-6
Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 0
Query:    1 MIMAKVLVGKFIMGNSNMVRPPLLRDSGGHRTYDTTVDNVNTPKIFV 47
            M +AKVLVGK I+G +   RPP L     HR YDT VDN+  P +FV
Sbjct:  555 MFLAKVLVGKVIVGQNIFRRPPPLNTRTKHRLYDTCVDNLEKPTMFV 601          
BLAST of mRNA_H-elongata_contig106209.504.1 vs. uniprot
Match: UPI001CF2359B (uncharacterized protein LOC114954972 n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF2359B)

HSP 1 Score: 51.6 bits (122), Expect = 2.930e-6
Identity = 22/47 (46.81%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 MIMAKVLVGKFIMGNSNMVRPPLLRDSGGHRTYDTTVDNVNTPKIFV 47
            M +A+VLVG +  G  +M RPPL  D+  +  +D+ VDN++TPKI+V
Sbjct: 1158 MFLAEVLVGSYTKGELSMKRPPLKGDTASNERFDSCVDNMDTPKIYV 1204          
BLAST of mRNA_H-elongata_contig106209.504.1 vs. uniprot
Match: A0A455B1X7_PHYMC (Poly [ADP-ribose] polymerase n=1 Tax=Physeter macrocephalus TaxID=9755 RepID=A0A455B1X7_PHYMC)

HSP 1 Score: 50.8 bits (120), Expect = 5.430e-6
Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MIMAKVLVGKFIMGNSNMVRPPLLRDSGGHRTYDTTVDNVNTPKIFV 47
            M +A+VLVG+FI GN+N VRPP  ++  G+  YD+ V+ V+ P IFV
Sbjct:  298 MFLARVLVGEFIRGNANFVRPPA-KEGQGNVLYDSCVNRVSDPSIFV 343          
BLAST of mRNA_H-elongata_contig106209.504.1 vs. uniprot
Match: A0A6J8DRA1_MYTCO (Poly [ADP-ribose] polymerase n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8DRA1_MYTCO)

HSP 1 Score: 50.8 bits (120), Expect = 5.470e-6
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 MIMAKVLVGKFIMGNSNMVRPP-LLRDSGGHRTYDTTVDNVNTPKIFV 47
            MI+++VLVGK+  GN+N  +PP L  D    R YD+ VD+++ PKIFV
Sbjct:  575 MILSRVLVGKYTGGNANFRKPPPLFADDPSGRYYDSCVDHIHAPKIFV 622          
BLAST of mRNA_H-elongata_contig106209.504.1 vs. uniprot
Match: A0A383ZPT2_BALAS (protein mono-ADP-ribosyltransferase PARP12 n=4 Tax=Balaenoptera TaxID=9766 RepID=A0A383ZPT2_BALAS)

HSP 1 Score: 50.8 bits (120), Expect = 5.470e-6
Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 MIMAKVLVGKFIMGNSNMVRPPLLRDSGGHRTYDTTVDNVNTPKIFV 47
            M +A+VLVG+F+ GN+N VRPP  ++  G+  YD+ V++V+ P IFV
Sbjct:  617 MFLARVLVGEFVRGNANFVRPPA-KEGQGNVLYDSCVNHVSDPSIFV 662          
BLAST of mRNA_H-elongata_contig106209.504.1 vs. uniprot
Match: A0A7D9EBJ2_PARCT (Poly [ADP-ribose] polymerase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EBJ2_PARCT)

HSP 1 Score: 50.8 bits (120), Expect = 5.490e-6
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 0
Query:    1 MIMAKVLVGKFIMGNSNMVRPPLLRDSGGHRTYDTTVDNVNTPKIFV 47
            M  A+VLVG +  G SNM  PP    +  H TYD+ VDNV TP I+V
Sbjct: 1367 MFYARVLVGDYTKGTSNMPVPPNKTPANTHETYDSVVDNVATPSIYV 1413          
BLAST of mRNA_H-elongata_contig106209.504.1 vs. uniprot
Match: A0A060X0K2_ONCMY (Poly [ADP-ribose] polymerase n=9 Tax=Oncorhynchus TaxID=8016 RepID=A0A060X0K2_ONCMY)

HSP 1 Score: 48.9 bits (115), Expect = 6.600e-6
Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 MIMAKVLVGKFIMGNSNMVRPPLLRDSGGHRTYDTTVDNVNTPKIFV 47
            M + +VLVG + +GNS+ + PPL +++GG   YD+ VDN+  P +FV
Sbjct:   64 MFVCRVLVGDYTVGNSSCLTPPL-KETGGSIAYDSCVDNIQEPHVFV 109          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106209.504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000854CB026.630e-753.19poly [ADP-ribose] polymerase 12-like n=1 Tax=Nanor... [more]
A0A7K5HG75_CROSL1.840e-653.19Poly [ADP-ribose] polymerase (Fragment) n=1 Tax=Cr... [more]
A0A674CPF9_SALTR1.980e-648.94PARP catalytic domain-containing protein n=1 Tax=S... [more]
A0A3P8VCA7_CYNSE2.920e-653.19TCDD-inducible poly [ADP-ribose] polymerase-like n... [more]
UPI001CF2359B2.930e-646.81uncharacterized protein LOC114954972 n=2 Tax=Acrop... [more]
A0A455B1X7_PHYMC5.430e-651.06Poly [ADP-ribose] polymerase n=1 Tax=Physeter macr... [more]
A0A6J8DRA1_MYTCO5.470e-650.00Poly [ADP-ribose] polymerase n=1 Tax=Mytilus corus... [more]
A0A383ZPT2_BALAS5.470e-648.94protein mono-ADP-ribosyltransferase PARP12 n=4 Tax... [more]
A0A7D9EBJ2_PARCT5.490e-651.06Poly [ADP-ribose] polymerase n=1 Tax=Paramuricea c... [more]
A0A060X0K2_ONCMY6.600e-644.68Poly [ADP-ribose] polymerase n=9 Tax=Oncorhynchus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.228.10coord: 1..49
e-value: 3.8E-12
score: 48.1
NoneNo IPR availablePANTHERPTHR14453PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEINcoord: 1..47
IPR012317Poly(ADP-ribose) polymerase, catalytic domainPROSITEPS51059PARP_CATALYTICcoord: 1..49
score: 12.304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig106209contigH-elongata_contig106209:581..730 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig106209.504.1mRNA_H-elongata_contig106209.504.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig106209 581..748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig106209.504.1 ID=prot_H-elongata_contig106209.504.1|Name=mRNA_H-elongata_contig106209.504.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MIMAKVLVGKFIMGNSNMVRPPLLRDSGGHRTYDTTVDNVNTPKIFVRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012317Poly(ADP-ribose)pol_cat_dom