mRNA_H-elongata_contig185787.5034.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE) HSP 1 Score: 195 bits (495), Expect = 1.630e-56 Identity = 94/149 (63.09%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 4 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 450
I+ +V I CFSH+FNNIG RL+ PD+D FLGKL+TLL+HSP AKALF E GV P TP HRWGSRYE D +A+NWPGVVKF+ Y+S DD KSKT W+R+EL R R DG+ Q VL+ QLA++VDVG VT A IFLEGD PL+
Sbjct: 171 IYRKSVGIPCFSHLFNNIGTRLRFPDVDEFLGKLHTLLSHSPQAKALFREIVGVTDPPTPNHRWGSRYERDYLIAMNWPGVVKFIEAYKSNDDEKSKTATWLRSELARKRNDGKDQVLVLRMQLAVLVDVGKIVTAACIFLEGDEPLLH 319
BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JN03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN03_9PHAE) HSP 1 Score: 179 bits (453), Expect = 2.290e-51 Identity = 87/149 (58.39%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 4 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 450
I+ ++ + CFSH+FNNIGKRL PDL+ FLGKL+TLL+HSP AKAL E GVA P TP HRWGSR+E D +A+N PGVVKF+ ++S D+ KS+T W+R+EL R R DG+ Q VL+ QLA++VDVG VT IFLEGD PL+
Sbjct: 171 IYRRSLGVSCFSHLFNNIGKRLIFPDLEDFLGKLHTLLSHSPQAKALLREIVGVADPPTPNHRWGSRFERDYLVAMNSPGVVKFIEAHKSNDEDKSRTAAWLRSELARKRDDGKYQVLVLRMQLAVLVDVGKIVTATCIFLEGDEPLLH 319
BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JD81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD81_9PHAE) HSP 1 Score: 182 bits (463), Expect = 3.830e-51 Identity = 90/149 (60.40%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 4 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 450
+F A+ I C SH FNNIGK+L + DLDAFLGK++TLL+HS AKALF E+ GV APSTPGHRWGSR++ D +A+NWPGV++F+A Y S D KSK K+MR+EL R R D + Q+ L+ QLA+MVDVG VT+ATI LEGD PL
Sbjct: 338 LFRYAIVIGCLSHTFNNIGKQLSSLDLDAFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYVIAMNWPGVLEFIAAYESGDTDKSKAAKFMRDELVRVRDDNKTQSLHLQMQLALMVDVGRSVTSATIVLEGDEPLAH 486
BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JRY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY7_9PHAE) HSP 1 Score: 176 bits (445), Expect = 3.840e-51 Identity = 86/149 (57.72%), Postives = 108/149 (72.48%), Query Frame = 1
Query: 4 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 450
+F AV I C SH F+NI K+L P+LD F+GK++TL +HS AKALF E+ GV APSTPGHRWGSR++ D +A+NWPGV+KF+A Y S D KSK K+MR+EL R R D + Q+ VL+ LA+MVDVG VT+ATI LEGD P
Sbjct: 51 LFRYAVVIGCLSHTFHNIAKQLCTPELDTFIGKMHTLPSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYIIAMNWPGVLKFIAAYESADTDKSKAAKFMRDELVRVRDDNKAQSLVLQLHLALMVDVGRSVTSATIVLEGDEPFAH 199
BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JJR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR7_9PHAE) HSP 1 Score: 179 bits (453), Expect = 2.670e-49 Identity = 89/149 (59.73%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 4 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 450
+F A+ I C SH FNNIGK+L P+L FLGK++ LL HS AKALF E+ V APSTPGHRWGSR++ D +A+NWPGV++F+A Y+S D KSK K+MR+EL R R D Q+ VL+ QLA+MVDVG VT+ATI LEGD PLVR
Sbjct: 535 LFRYAIVIGCLSHTFNNIGKQLSTPELGTFLGKMHALLLHSAGAKALFKEKVRVRAPSTPGHRWGSRFDRDYIIAMNWPGVLEFIAAYKSGDTDKSKAAKFMRDELVRFRDDKTPQSLVLQLQLALMVDVGRSVTSATIVLEGDEPLVR 683
BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5KX52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX52_9PHAE) HSP 1 Score: 176 bits (445), Expect = 7.540e-49 Identity = 87/146 (59.59%), Postives = 107/146 (73.29%), Query Frame = 1
Query: 4 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSP 441
+F AV I C FNNI K+L P+LD FLGK++TLL+HS AKALF E+ GV APSTPGHRWGSR++ D +A+NWPGV+KF+A Y S D KSK K+MR+EL R R D + Q+ VL+ LA+MVDVG VT+ATI LEGD P
Sbjct: 185 LFRYAVVISCLPPTFNNIAKQLCTPELDTFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYIIAMNWPGVLKFIAAYESADTDKSKAAKFMRDELVRVRDDNKAQSLVLQLHLALMVDVGCSVTSATIVLEGDEP 330
BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JCP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP4_9PHAE) HSP 1 Score: 166 bits (420), Expect = 5.490e-47 Identity = 83/149 (55.70%), Postives = 106/149 (71.14%), Query Frame = 1
Query: 4 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 450
+F A+ I C SH FNN +L P+LD F GK++TLL+HS AKALF E+ GV A STPGHRWGSR++ D +A+NWPGV++F+A Y SED KS K+MR+EL R R D Q+ +L+ Q A+MVDVG VT+ATI LEGD PL +
Sbjct: 31 LFRYAIVIGCLSHTFNN---QLSTPELDTFRGKMHTLLSHSAGAKALFKEKVGVRAQSTPGHRWGSRFDRDYIIAMNWPGVLEFIAAYESEDTDKSNAAKFMRDELVRVRDDKNPQSLILQLQQALMVDVGRSVTSATIVLEGDEPLAQ 176
BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JZH8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH8_9PHAE) HSP 1 Score: 163 bits (412), Expect = 9.770e-46 Identity = 82/150 (54.67%), Postives = 102/150 (68.00%), Query Frame = 1
Query: 1 IIFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 450
++F AV I CFSH FNNIGK+L ++D FLGKL+TLL+HS AK LF +E GV AP TPGHRWGSR+E DE +A+NWPG VKF MR++L + R DG+ Q+ VL+ QLA+ VDVG +T+ATIFLEGD PL
Sbjct: 50 LVFRFAVVIPCFSHTFNNIGKQLVCEEIDVFLGKLHTLLSHSAFAKDLFRKEVGVRAPETPGHRWGSRFERDEVIAVNWPGAVKF-----------------MRDDLAKLRDDGKAQSLVLQLQLALTVDVGRIITSATIFLEGDMPLAH 182
BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5KTX0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTX0_9PHAE) HSP 1 Score: 162 bits (409), Expect = 2.410e-43 Identity = 82/137 (59.85%), Postives = 103/137 (75.18%), Query Frame = 1
Query: 4 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVG--AHVT 408
+F A+ I C SH FNNIGK+L + DLDAFLGK++TLL+HS AKALF E+ GV APSTPGHRWGSR++ D +A+NWPGV++F+A Y S D KSK K+MR+EL R R D + Q+ L+ QLA+MVDVG AH T
Sbjct: 435 LFRYAIVIGCLSHTFNNIGKQLSSLDLDAFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYVIAMNWPGVLEFIAAYESGDTDKSKAAKFMRDELVRVRDDNKTQSLHLQMQLALMVDVGRSAHKT 571
BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5K4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R7_9PHAE) HSP 1 Score: 157 bits (398), Expect = 5.080e-42 Identity = 77/134 (57.46%), Postives = 100/134 (74.63%), Query Frame = 1
Query: 16 AVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNAT 417
A+ I C SH FNNIGK+L +LD FLGK++TLL+HS +KALF E+ GV APSTPGHRWGSR++ D +A+NWPGV++F+A Y + D KSK K+MR+EL + R D Q+ L+ QLA+MVDVG VT+AT
Sbjct: 444 AIVIGCLSHTFNNIGKQLSTQELDTFLGKMHTLLSHSAGSKALFKEKVGVRAPSTPGHRWGSRFDRDYIIAMNWPGVLEFIAAYENGDTDKSKAAKFMRDELVQFRDDKNPQSLFLQLQLALMVDVGRSVTSAT 577 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig185787.5034.1 >prot_H-elongata_contig185787.5034.1 ID=prot_H-elongata_contig185787.5034.1|Name=mRNA_H-elongata_contig185787.5034.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp IIFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLback to top mRNA from alignment at H-elongata_contig185787:753..1220- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig185787.5034.1 ID=mRNA_H-elongata_contig185787.5034.1|Name=mRNA_H-elongata_contig185787.5034.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=468bp|location=Sequence derived from alignment at H-elongata_contig185787:753..1220- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig185787:753..1220- >mRNA_H-elongata_contig185787.5034.1 ID=mRNA_H-elongata_contig185787.5034.1|Name=mRNA_H-elongata_contig185787.5034.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig185787:753..1220- (Himanthalia elongata Himel1 dioecious)back to top |