prot_H-elongata_contig185605.5023.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig185605.5023.1
Unique Name	prot_H-elongata_contig185605.5023.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	64

Homology

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BLAST of mRNA_H-elongata_contig185605.5023.1 vs. uniprot
Match: D8LFH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH0_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.850e-19
Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 0

Query:    1 MSEVNEEIKRSKSRMEGFKEVENRMNTRHTRGNAKGAI-EDPFLAQTTGSKTNGNSKRPLCEFT 63
            ++E NEEI+RSK+ MEGFKE  NRMNTRHTRGNAKG I +DP+L  +T SKTNGN KRPLC  +
Sbjct:  182 LTEANEEIRRSKNVMEGFKEDVNRMNTRHTRGNAKGNIVDDPWLTSSTASKTNGNGKRPLCAIS 245

[Close]

BLAST of mRNA_H-elongata_contig185605.5023.1 vs. uniprot
Match: A0A6H5KFI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI1_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 4.370e-18
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 0

Query:    1 MSEVNEEIKRSKSRMEGFKEVENRMNTRHTRGNAKGAI-EDPFLAQTTGSKTNGNSKRPLCEFT 63
            ++E NEEI+RSK+ MEGFKE  NRMNTRHTRGNAKG I +DP+L  +T SK NGN KRPLC  +
Sbjct:  397 LTEANEEIRRSKNLMEGFKEDVNRMNTRHTRGNAKGNIVDDPWLTSSTSSKANGNGKRPLCAIS 460

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig185605.5023.1 vs. uniprot

BLAST of mRNA_H-elongata_contig185605.5023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LFH0_ECTSI	3.850e-19	68.75	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KFI1_9PHAE	4.370e-18	67.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig185605	contig	H-elongata_contig185605:355..838 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig185605.5023.1	mRNA_H-elongata_contig185605.5023.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig185605 355..853 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig185605.5023.1 ID=prot_H-elongata_contig185605.5023.1|Name=mRNA_H-elongata_contig185605.5023.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
MSEVNEEIKRSKSRMEGFKEVENRMNTRHTRGNAKGAIEDPFLAQTTGSK
TNGNSKRPLCEFT*