prot_H-elongata_contig185601.5022.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig185601.5022.1
Unique Nameprot_H-elongata_contig185601.5022.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig185601.5022.1 vs. uniprot
Match: A0A804HMU3_MUSAM (DUF659 domain-containing protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804HMU3_MUSAM)

HSP 1 Score: 62.8 bits (151), Expect = 1.500e-9
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0
Query:    3 WMKCAAHAVDLLLKNLENLDIFADTLKRINKVVKFVKNHHGASAIYESHTNLRLITPCATRFATNVI 69
            W  CAAH +D++LK++  LD     + R   + KF+ NHH   A+ +++ N  ++ P  TRFATN I
Sbjct:  218 WTPCAAHCIDIMLKDIGELDAVKKCVARAQSITKFIYNHHWVHALMQNYVNGEILRPGITRFATNFI 284          
BLAST of mRNA_H-elongata_contig185601.5022.1 vs. uniprot
Match: A0A426WWC4_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426WWC4_ENSVE)

HSP 1 Score: 58.9 bits (141), Expect = 3.420e-8
Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    3 WMKCAAHAVDLLLKNLENLDIFADTLKRINKVVKFVKNHHGASAIYESHTNLRLITPCATRFATNVI 69
            W   AAH +DL+LK++  LD+    + R   + KF+ NHH   ++ + + N  ++ P  TRFATN I
Sbjct:   85 WTSRAAHCIDLMLKDIGELDMVKKCVARAQSITKFIYNHHWVHSLMQKYVNDEILRPGVTRFATNFI 151          
BLAST of mRNA_H-elongata_contig185601.5022.1 vs. uniprot
Match: UPI0008FEB6BF (uncharacterized protein LOC109123831 n=1 Tax=Vitis vinifera TaxID=29760 RepID=UPI0008FEB6BF)

HSP 1 Score: 58.5 bits (140), Expect = 4.600e-8
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    3 WMKCAAHAVDLLLKNLENLDIFADTLKRINKVVKFVKNHHGASAIYESHT-NLRLITPCATRFAT 66
            W  CAAH +DL+L+++E L++ A TL +  +VVKF+  H    ++  + T N  LI P  TRFAT
Sbjct:   12 WTPCAAHCIDLMLEDIEKLNVHATTLSQARQVVKFIYGHTWVLSLMRTFTKNHELIRPAITRFAT 76          
BLAST of mRNA_H-elongata_contig185601.5022.1 vs. uniprot
Match: A0A1Y1IK20_KLENI (DUF659 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IK20_KLENI)

HSP 1 Score: 57.8 bits (138), Expect = 8.760e-8
Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    1 MTWMKCAAHAVDLLLKNLENLDIFADTLKRINKVVKFVKNHHGASAIYESHTNLRLITPCATRFATNVIVVMYMLK 76
            +T   C AH +DL L+++   +  + TLK    +VKF+ NHH   A++  H++L L+ P  TRFAT+ I +  +L+
Sbjct:  287 ITCSGCVAHGMDLALEDVGKEEWVSPTLKAARDLVKFITNHHKTIALFRQHSDLELLKPGDTRFATSFITLERLLE 362          
BLAST of mRNA_H-elongata_contig185601.5022.1 vs. uniprot
Match: A0A843V1P5_COLES (BED-type domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843V1P5_COLES)

HSP 1 Score: 56.2 bits (134), Expect = 3.160e-7
Identity = 28/74 (37.84%), Postives = 39/74 (52.70%), Query Frame = 0
Query:    3 WMKCAAHAVDLLLKNLENLDIFADTLKRINKVVKFVKNHHGASAIYESHTNLRLITPCATRFATNVIVVMYMLK 76
            W  CAAH VDL+LK +  L      ++   K+ +++ NHH   A     T   L+ P  TRFATN I +  +LK
Sbjct:  366 WTPCAAHCVDLMLKEIGTLRPVKTVVEAGQKITRYIYNHHVVLAWMRESTGGELLRPAITRFATNFIALQSLLK 439          
BLAST of mRNA_H-elongata_contig185601.5022.1 vs. uniprot
Match: UPI00155AACC1 (uncharacterized protein LOC117930350 n=1 Tax=Vitis riparia TaxID=96939 RepID=UPI00155AACC1)

HSP 1 Score: 55.8 bits (133), Expect = 3.590e-7
Identity = 28/65 (43.08%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    3 WMKCAAHAVDLLLKNLENLDIFADTLKRINKVVKFVKNHHGASAIYESHT-NLRLITPCATRFAT 66
            W  CAAH +DL LK++  L++ A TL R  +VVKF+  H    ++  + T N  L+ P  TRFAT
Sbjct:   88 WTPCAAHCIDLTLKDIGKLNVHATTLSRARQVVKFIYGHTWVFSLMRTFTKNHDLLHPAITRFAT 152          
BLAST of mRNA_H-elongata_contig185601.5022.1 vs. uniprot
Match: UPI000511298E (uncharacterized protein LOC103958368 isoform X1 n=3 Tax=Maleae TaxID=721813 RepID=UPI000511298E)

HSP 1 Score: 55.5 bits (132), Expect = 5.840e-7
Identity = 27/75 (36.00%), Postives = 41/75 (54.67%), Query Frame = 0
Query:    3 WMKCAAHAVDLLLKNLENLDIFADTLKRINKVVKFVKNHHGASAIYESHTN-LRLITPCATRFATNVIVVMYMLK 76
            W +CAAH +DL LK++  +  F DTLK    V K++  H    A+    TN   ++ P  TRFAT+ + +  + K
Sbjct:  319 WTQCAAHCIDLTLKDIAKMKWFDDTLKHAKCVTKYLYGHQWVLALMRKFTNNTEILRPAVTRFATSFLTLQILQK 393          
BLAST of mRNA_H-elongata_contig185601.5022.1 vs. uniprot
Match: A0A843VI85_COLES (BED-type domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VI85_COLES)

HSP 1 Score: 55.1 bits (131), Expect = 8.100e-7
Identity = 28/74 (37.84%), Postives = 38/74 (51.35%), Query Frame = 0
Query:    3 WMKCAAHAVDLLLKNLENLDIFADTLKRINKVVKFVKNHHGASAIYESHTNLRLITPCATRFATNVIVVMYMLK 76
            W  CAAH VDL+LK +  L      +    K+ +F+ NHH   A     T   L+ P  TRFATN + +  +LK
Sbjct:  442 WTPCAAHCVDLMLKEIGTLQPVKMVVDAGQKITRFIYNHHLVLAWMRESTGGELLRPGVTRFATNFVALQSLLK 515          
BLAST of mRNA_H-elongata_contig185601.5022.1 vs. uniprot
Match: A0A843TN79_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843TN79_COLES)

HSP 1 Score: 53.9 bits (128), Expect = 2.070e-6
Identity = 28/74 (37.84%), Postives = 37/74 (50.00%), Query Frame = 0
Query:    3 WMKCAAHAVDLLLKNLENLDIFADTLKRINKVVKFVKNHHGASAIYESHTNLRLITPCATRFATNVIVVMYMLK 76
            W  CAAH VDL+LK +  L      +    K+  F+ NHH   A     T   L+ P  TRFATN + +  +LK
Sbjct:  322 WTPCAAHCVDLMLKEIGTLQPVKMVVDAGQKITHFIYNHHLVLAWMRESTGGELLRPGVTRFATNFVALQSLLK 395          
BLAST of mRNA_H-elongata_contig185601.5022.1 vs. uniprot
Match: A0A388KCU7_CHABU (DUF659 domain-containing protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388KCU7_CHABU)

HSP 1 Score: 53.5 bits (127), Expect = 2.760e-6
Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    3 WMKCAAHAVDLLLKNLENLDIFADTLKRINKVVKFVKNHHGASAIY----ESHTNLRLITPCATRFA 65
            W+ CAAH ++LL+K++  LD     ++R   +VKF++ HH  +++Y    E    L LI P   RFA
Sbjct:  384 WVPCAAHCLNLLMKDVCELDXVKQVVQRTKMMVKFIRKHHNTNSLYTRCSELSRELTLILPTEVRFA 450          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig185601.5022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A804HMU3_MUSAM1.500e-938.81DUF659 domain-containing protein n=1 Tax=Musa acum... [more]
A0A426WWC4_ENSVE3.420e-837.31Uncharacterized protein n=1 Tax=Ensete ventricosum... [more]
UPI0008FEB6BF4.600e-843.08uncharacterized protein LOC109123831 n=1 Tax=Vitis... [more]
A0A1Y1IK20_KLENI8.760e-836.84DUF659 domain-containing protein n=1 Tax=Klebsormi... [more]
A0A843V1P5_COLES3.160e-737.84BED-type domain-containing protein n=1 Tax=Colocas... [more]
UPI00155AACC13.590e-743.08uncharacterized protein LOC117930350 n=1 Tax=Vitis... [more]
UPI000511298E5.840e-736.00uncharacterized protein LOC103958368 isoform X1 n=... [more]
A0A843VI85_COLES8.100e-737.84BED-type domain-containing protein n=1 Tax=Colocas... [more]
A0A843TN79_COLES2.070e-637.84Uncharacterized protein n=1 Tax=Colocasia esculent... [more]
A0A388KCU7_CHABU2.760e-637.31DUF659 domain-containing protein n=2 Tax=Chara bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..63
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 5..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig185601contigH-elongata_contig185601:216..476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig185601.5022.1mRNA_H-elongata_contig185601.5022.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig185601 210..476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig185601.5022.1 ID=prot_H-elongata_contig185601.5022.1|Name=mRNA_H-elongata_contig185601.5022.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
MTWMKCAAHAVDLLLKNLENLDIFADTLKRINKVVKFVKNHHGASAIYES
HTNLRLITPCATRFATNVIVVMYMLKASISSVYFII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf