mRNA_H-elongata_contig1062.502.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1062.502.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE) HSP 1 Score: 219 bits (557), Expect = 4.180e-71 Identity = 99/141 (70.21%), Postives = 122/141 (86.52%), Query Frame = 1
Query: 4 VGGSLHAAEIHWVHIKEGTKDELLVVGVLFDTSEYGTNVELQPLWDALKIGDNSTEESFETRVYDLLPPNPVFSHYMGSLTTPPCTEGVTWIVMNEPVIIGKIQLDEFRLSVAHYDDSKVDELGNTNRPYQPLNDRDVYLV 426
+GGS H AEIHWVH+K GT D+LLV+GVLFDT++YG+NVE++ LWD L IG +T+E F TRVYD++P NPVFSHYMGSLTTPPCTEGV WIVM++PV +GK+QLDEFR SVA +D+SKVDE+GNTNRP Q LN+RD++ V
Sbjct: 2 IGGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTTDEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMGKMQLDEFRTSVALFDNSKVDEMGNTNRPRQSLNNRDIFFV 142
BLAST of mRNA_H-elongata_contig1062.502.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA) HSP 1 Score: 221 bits (563), Expect = 5.580e-70 Identity = 100/141 (70.92%), Postives = 123/141 (87.23%), Query Frame = 1
Query: 4 VGGSLHAAEIHWVHIKEGTKDELLVVGVLFDTSEYGTNVELQPLWDALKIGDNSTEESFETRVYDLLPPNPVFSHYMGSLTTPPCTEGVTWIVMNEPVIIGKIQLDEFRLSVAHYDDSKVDELGNTNRPYQPLNDRDVYLV 426
+GGS H+AEIHWVH+KEGT+D+LLVVGVLFDT++YG+NVE++ LWD L IG+ +T+E F TR+YD++P NPVFSHYMGSLTTPPCTEGV WIVM++PV + K+QLDEFR SVA +DDSKVDE GNTNRP Q LNDR ++ V
Sbjct: 148 IGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIGETTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMSKMQLDEFRTSVALFDDSKVDEHGNTNRPGQSLNDRKIFFV 288
BLAST of mRNA_H-elongata_contig1062.502.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI) HSP 1 Score: 162 bits (411), Expect = 5.770e-47 Identity = 77/141 (54.61%), Postives = 100/141 (70.92%), Query Frame = 1
Query: 4 VGGSLHAAEIHWVHIKEGTKDELLVVGVLFDTSEYGTNVELQPLWDALKIGDNSTEESFETRVYDLLPPNPVFSHYMGSLTTPPCTEGVTWIVMNEPVIIGKIQLDEFRLSVAHYDDSKVDELGNTNRPYQPLNDRDVYLV 426
+GG+ HAAEIH VH+K+ T D LLVVG++F+ S+YG NVEL+P+W+ + + + EE F Y LLP P F+ Y GSLTTPPCTEGV WI+M+EP + QLD +R +VA ++ SKV E+G TNRP Q LN RDV V
Sbjct: 153 LGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDIAEEQFMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEPNYMSTWQLDNYRRAVALHEGSKVSEVGATNRPIQELNGRDVLYV 293
BLAST of mRNA_H-elongata_contig1062.502.1 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA) HSP 1 Score: 146 bits (368), Expect = 1.630e-40 Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = 1
Query: 4 VGGSLHAAEIHWVHIKE---GTKDELLVVGVLFDTSEYGTNVELQPLWDALKIGDNSTEESFETRVYDLLPPNPVFSHYMGSLTTPPCTEGVTWIVMNEPVIIGKIQLDEFRLSVAHYDDSKVDELGNTNRPYQPLNDRDVYLV 426
V GSLH AEIH VH ++ GT+ ELLV+GV D E+G NV L+PLWD L G + Y+L+P + +SHYMGSLTTPPC+E V W+VM+ P +IG +QLD FR SVA +S+VDE NTNRP Q +N R VY+V
Sbjct: 155 VAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVLGSG---AKPRGVINPYELIPSDMAYSHYMGSLTTPPCSEIVRWVVMSTPTVIGDLQLDIFRDSVATATNSQVDERSNTNRPGQAINGRAVYIV 295
BLAST of mRNA_H-elongata_contig1062.502.1 vs. uniprot
Match: H6WB77_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB77_VAULI) HSP 1 Score: 90.5 bits (223), Expect = 2.590e-19 Identity = 58/163 (35.58%), Postives = 79/163 (48.47%), Query Frame = 1
Query: 4 VGGSLHAAEIHWVHIKEGTKDELLVVGVLFD-TSEYGTNVELQPLWDAL-------KIGDNSTEESFETRV----------------YDLLPPNPVFSHYMGSLTTPPCTEGVTWIVMNEPVIIGKIQLDEFRLSVAHYDDSKVDELGNTNRPYQPLNDRDVY 420
+GG + AEIH+VH L VVGV+ TS+ N+E W+ + + E+S T V Y +LP + + +Y+GSLTTPPC+E VTWIVM E + + QL+ FR + + VD GN RP QP N R VY
Sbjct: 94 IGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNVGNLEFAKYWEHMAYVSGKQQYASEIVEKSTATMVSATASSSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMVY 256
BLAST of mRNA_H-elongata_contig1062.502.1 vs. uniprot
Match: A0A7V5R810_9DELT (Carbonic anhydrase n=2 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A7V5R810_9DELT) HSP 1 Score: 90.1 bits (222), Expect = 2.730e-19 Identity = 57/140 (40.71%), Postives = 75/140 (53.57%), Query Frame = 1
Query: 4 VGGSLHAAEIHWVHIKEGTKDELLVVGVLFDTSEYGTNVELQPLWDAL--KIGDNSTEESFETRVYDLLPPNPVFSHYMGSLTTPPCTEGVTWIVMNEPVIIGKIQLDEFRLSVAHYDDSKVDELGNTNRPYQPLNDRDV 417
+ G E H+VH+ E L VVGVLF E N L LW + K G+ + S + R DL+P + + Y GSLTTPPCTEGV W+VM +P+ I K Q+DEF + HY+ NRP QP++ R V
Sbjct: 119 INGESFPLEAHFVHVAED--GSLAVVGVLFQIGE--ENEALARLWKQMPRKAGEKTAMAS-QVRAQDLMPEDRDYYRYNGSLTTPPCTEGVLWLVMKQPLTISKAQVDEFIHVMHHYN----------NRPVQPVHARPV 243
BLAST of mRNA_H-elongata_contig1062.502.1 vs. uniprot
Match: A0A7C5GTT5_9DELT (Carbonic anhydrase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C5GTT5_9DELT) HSP 1 Score: 90.1 bits (222), Expect = 3.100e-19 Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 1
Query: 4 VGGSLHAAEIHWVHIKEGTKDELLVVGVLFDTSEYGTNVELQPLWDALKIGDNSTEESFET-RVYDLLPPNPVFSHYMGSLTTPPCTEGVTWIVMNEPVIIGKIQLDEFRLSVAHYDDSKVDELGNTNRPYQPLNDRDVYLVK 429
VGG + E+H VH + K + VVGV E N ++ +W+ L + TE+ E +LLP + + HY GS TTPPCTEGV W V+ EP+ + K Q+D+FR S +D GN RP QPLN+R +++VK
Sbjct: 125 VGGKAYPMEMHLVHKSKDGK--IAVVGVFI--KEGAHNKAIEKIWEELPEKEGETEDVEEALSAAELLPASRSYYHYNGSFTTPPCTEGVNWFVITEPIELSKKQIDKFR--------SIMD--GNA-RPVQPLNERVIHIVK 252
BLAST of mRNA_H-elongata_contig1062.502.1 vs. uniprot
Match: A0A6H3AXA9_9ENTR (Carbonic anhydrase n=3 Tax=Citrobacter freundii complex TaxID=1344959 RepID=A0A6H3AXA9_9ENTR) HSP 1 Score: 89.7 bits (221), Expect = 3.900e-19 Identity = 53/139 (38.13%), Postives = 75/139 (53.96%), Query Frame = 1
Query: 4 VGGSLHAAEIHWVHIKEGTKDELLVVGVLFDTSEYGTNVELQPLWDAL-KIGDNSTEESFETRVYDLLPPNPVFSHYMGSLTTPPCTEGVTWIVMNEPVIIGKIQLDEFRLSVAHYDDSKVDELGNTNRPYQPLNDRDV 417
+ G +A E H VH + K ++ VV V+FD G N EL LW A+ + D + + + + LLP N + + GSLTTPPCTEGVTWIV+ P+ + + QL +F ++ H N NRP Q LN R +
Sbjct: 120 IHGKHYAMEAHLVH--KDAKGDVAVVAVMFDVG--GENAELNKLWTAMPEKADQEVKVTTQMDLNALLPTNKTYWRFSGSLTTPPCTEGVTWIVLQHPMTLSEAQLKKFTQAMHH----------NNNRPTQQLNGRAI 244
BLAST of mRNA_H-elongata_contig1062.502.1 vs. uniprot
Match: A0A450XNX8_9GAMM (Carbonic anhydrase n=1 Tax=Candidatus Kentron sp. MB TaxID=2138164 RepID=A0A450XNX8_9GAMM) HSP 1 Score: 89.4 bits (220), Expect = 5.980e-19 Identity = 52/144 (36.11%), Postives = 77/144 (53.47%), Query Frame = 1
Query: 1 QVGGSLHAAEIHWVHIKEGTKDELLVVGVLFDTSEYGTNVELQPLWDALKIGDNSTEESFET-RVYDLLPPNPVFSHYMGSLTTPPCTEGVTWIVMNEPVIIGKIQLDEFRLSVAHYDDSKVDELGNTNRPYQPLNDRDVYLVK 429
Q+GG L + E+H VH + EL V+G++ + + N ++ +W+ + ES ET V LLP + F +YMGSLTTPPC+EGV W VM P+ + Q+ +F + G +NRP QPLN R ++ K
Sbjct: 123 QIGGKLASMELHLVH--QNADKELAVIGIMIEEGK--ENKAIKGIWEKMPKKVAKETESHETFNVASLLPKDKTFFYYMGSLTTPPCSEGVRWFVMKTPIHFSEEQIRKFHRII-----------GVSNRPLQPLNGRTIFQGK 251
BLAST of mRNA_H-elongata_contig1062.502.1 vs. uniprot
Match: A0A4P7J5P8_9ENTR (Carbonic anhydrase n=1 Tax=Citrobacter tructae TaxID=2562449 RepID=A0A4P7J5P8_9ENTR) HSP 1 Score: 88.6 bits (218), Expect = 1.130e-18 Identity = 50/138 (36.23%), Postives = 74/138 (53.62%), Query Frame = 1
Query: 4 VGGSLHAAEIHWVHIKEGTKDELLVVGVLFDTSEYGTNVELQPLWDALKIGDNSTEESFETRVYDLLPPNPVFSHYMGSLTTPPCTEGVTWIVMNEPVIIGKIQLDEFRLSVAHYDDSKVDELGNTNRPYQPLNDRDV 417
+ G +A E+H VH E ++ V+ VLFD E N L+ LW ++ ++ + +LLP + + HY GSLTTPPC+E V+W VM P+ + + QL FR ++ + N NRP QPLN R+V
Sbjct: 124 IDGKQYAMEMHLVH--EDRTGKIAVIAVLFDIGE--PNDALENLWQSIPADGDNMPLFSPININELLPEDKNYWHYSGSLTTPPCSEPVSWFVMKSPLTLSQKQLSRFRAAIQY----------NNNRPVQPLNGREV 247 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1062.502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1062.502.1 >prot_H-elongata_contig1062.502.1 ID=prot_H-elongata_contig1062.502.1|Name=mRNA_H-elongata_contig1062.502.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp QVGGSLHAAEIHWVHIKEGTKDELLVVGVLFDTSEYGTNVELQPLWDALKback to top mRNA from alignment at H-elongata_contig1062:15935..17105- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1062.502.1 ID=mRNA_H-elongata_contig1062.502.1|Name=mRNA_H-elongata_contig1062.502.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1171bp|location=Sequence derived from alignment at H-elongata_contig1062:15935..17105- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1062:15935..17105- >mRNA_H-elongata_contig1062.502.1 ID=mRNA_H-elongata_contig1062.502.1|Name=mRNA_H-elongata_contig1062.502.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at H-elongata_contig1062:15935..17105- (Himanthalia elongata Himel1 dioecious)back to top |