prot_H-elongata_contig1855.5018.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1855.5018.1
Unique Nameprot_H-elongata_contig1855.5018.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length687
Homology
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BLAST of mRNA_H-elongata_contig1855.5018.1 vs. uniprot
Match: D7G202_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G202_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 4.590e-29
Identity = 160/528 (30.30%), Postives = 214/528 (40.53%), Query Frame = 0 
Query:   29 AERLAVLATPLRRRAALGRGPQVAV-------TPRQAAISARKQVEGQRRRXXXXXXXXXXXMMSAAKAKQAAEFVEQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRNILAHKNVEWSKERSLKRRQEQERQAEERMIMEGRTVFLEAKEKIKEERRLIAKRELQWRVNTLTSEKTRKTRVGVRAANEARKLRTIHAQDQAALENAADEEKRLRRESAQWRRNEMMLDVEIKRSVENKALDAKKLAIEF----------------------------------------------------------------------CLR-------------------------------DEDRKARELELL----------KARKAEDDFKRLQHANNRLYKQEEEMKXXXXXXRERRVLLEDRESILEAIRREEEAELDRREALRELPSEKTKLAILEEIWAKQAHPAARAATHGRRRLCLEELEELVSPEASASPEATTSG 438
            AERLAV+ TP R+                   TPRQAAI+A+K++      X          M + AKAKQA    EQQ             X     XXXXXXXX                              RR  LAH++  W +ER +K+ Q + R+ E+R++MEG  +F EAK ++K+++    K+E  WR N    +K+                          L+ A +EE+RLRR SAQW RN+ +LD EI++    KALD  KLA E                                                                       CLR                                EDR+  EL  L          + +K E++++R Q    R  K++EE++       ERRV+LEDRES+  + RREE+AELDR E LR+ PS+KTKL ILE +WA+Q HPAA AA  GRRR     L+     EA +S E  TSG
Sbjct:   59 AERLAVMGTPARKXXXXXXXXXXXXXXXIAHQTPRQAAIAAKKELTEXXXXXAAMLKQQELEMKNIAKAKQAELAAEQQRTLRERAERAKKQXLAAASXXXXXXXXQTEKQARALQEKMGEQRELNERLAKEERARRRESLAHRSAAWEREREMKKSQRKARKQEQRLVMEGHELFREAKSRVKKQQERTDKQERAWRANRAYLDKSLDEGAEDXXXXXXXXXXXXXXXXXXXLDRAEEEERRLRRTSAQWGRNKQLLDREIEQG-SGKALDPFKLADELFQRAESRKEDAEYREAQKALWRESQQRHRRSEARRKVVGEALHEEEREREADLTASKEEGMRDVEAYRQECLRRDRESLDWHRQKFFDDRAVEEWTKGIAKAAETEDRELSELARLDSEAYKRRVEETQKLEEEYRRQQQIEGRFNKEDEELRMREQEAEERRVMLEDRESVSASKRREEQAELDRLEGLRDTPSDKTKLEILEAMWARQTHPAAAAAARGRRRQSSRRLDLRTVIEAGSSAELGTSG 585
[Close]
BLAST of mRNA_H-elongata_contig1855.5018.1 vs. uniprot
Match: A0A6H5L5K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K2_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.530e-19
Identity = 62/121 (51.24%), Postives = 82/121 (67.77%), Query Frame = 0 
Query:  318 ARKAEDDFKRLQHANNRLYKQEEEMKXXXXXXRERRVLLEDRESILEAIRREEEAELDRREALRELPSEKTKLAILEEIWAKQAHPAARAATHGRRRLCLEELEELVSPEASASPEATTSG 438
            A+K E++++R Q   +R YK++EE++       ERRV+LEDRES+  + RREE+AELDR E LR+ PS+KTKL ILE +WA+Q HPAA AA  GRRR     L+     EA +S E  TSG
Sbjct:  241 AQKLEEEYRRQQQIEDRFYKEDEELRMREQEAEERRVMLEDRESVSASKRREEQAELDRLEGLRDTPSDKTKLEILEAMWARQTHPAAAAAARGRRRQSSRRLDLRTVIEAGSSAELGTSG 361
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1855.5018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G202_ECTSI4.590e-2930.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5K2_9PHAE1.530e-1951.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..83
NoneNo IPR availableCOILSCoilCoilcoord: 318..359
NoneNo IPR availableCOILSCoilCoilcoord: 248..275
NoneNo IPR availableCOILSCoilCoilcoord: 362..383
NoneNo IPR availableCOILSCoilCoilcoord: 133..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1855contigH-elongata_contig1855:3298..12909 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1855.5018.1mRNA_H-elongata_contig1855.5018.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1855 3201..12909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1855.5018.1 ID=prot_H-elongata_contig1855.5018.1|Name=mRNA_H-elongata_contig1855.5018.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=687bp
MQPSSLQHSLEMSNTAGGSTNGSSLASGAERLAVLATPLRRRAALGRGPQ
VAVTPRQAAISARKQVEGQRRREAALLKQQREEMMSAAKAKQAAEFVEQQ
HAIKKRAETAQRQRKNAAAAKKAAKAIDTAEQAKEFQAKMEESRDLKERL
VNEEKERRRNILAHKNVEWSKERSLKRRQEQERQAEERMIMEGRTVFLEA
KEKIKEERRLIAKRELQWRVNTLTSEKTRKTRVGVRAANEARKLRTIHAQ
DQAALENAADEEKRLRRESAQWRRNEMMLDVEIKRSVENKALDAKKLAIE
FCLRDEDRKARELELLKARKAEDDFKRLQHANNRLYKQEEEMKRKAAAAR
ERRVLLEDRESILEAIRREEEAELDRREALRELPSEKTKLAILEEIWAKQ
AHPAARAATHGRRRLCLEELEELVSPEASASPEATTSGESGEVGRASEEP
NGVVGGGVGGVVGDFGERGGIISVSNIASDSSSSGSSGMGNVRRVSSSSS
LDSMLNECRERCARRGTSALALTESADLSSASFTSQSATGLDDGSGGGGG
FVGDLSVKRNNPRLDDLNLDGREAIYDTAGVSSAPSWSDTSVIEARGVTA
EAAAVLAAAERSFDSEESLDEAGAAAVASAAAWSSSKGSESHESGFPVRA
LVFPPTPSEKEHDGPNAEARCREAGNGQVERSISESE
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