prot_H-elongata_contig18544.5012.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18544.5012.1
Unique Nameprot_H-elongata_contig18544.5012.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: D7FU38_ECTSI (NMO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU38_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 4.970e-59
Identity = 106/134 (79.10%), Postives = 116/134 (86.57%), Query Frame = 0
Query:    1 PLVLPSPCQVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADALEP 134
            P+  P   QVISSG+SYEK AGYSRAVRVGKHVQVAGTTA  PDGSGVLC GDV GQTQYIFHIIALALREA C+LENVVRTRM+VT+I N +KVMAEH K+FS IRPAAT++ VS+LV P LLVEIEADALEP
Sbjct:  423 PVRAPGTRQVISSGSSYEKMAGYSRAVRVGKHVQVAGTTATDPDGSGVLCIGDVGGQTQYIFHIIALALREAGCSLENVVRTRMYVTDIKNAEKVMAEHCKVFSSIRPAATLVSVSSLVHPDLLVEIEADALEP 556          
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A6H5JZB1_9PHAE (NMO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB1_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.510e-57
Identity = 103/134 (76.87%), Postives = 117/134 (87.31%), Query Frame = 0
Query:    1 PLVLPSPCQVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADALEP 134
            P+  P   QVISSG+SYEK AGYSRAVRVGKHVQVAGTTA  PDGSGVLC GDV GQTQYIFHII+LAL+EA C+LENVVRTRM+VT+I+N +KVMAEH ++FS IRPAAT++ VS+LV P LLVEIEADALEP
Sbjct:  527 PVRAPGTRQVISSGSSYEKMAGYSRAVRVGKHVQVAGTTATDPDGSGVLCIGDVGGQTQYIFHIISLALKEAGCSLENVVRTRMYVTDIENAEKVMAEHCRVFSSIRPAATLISVSSLVHPDLLVEIEADALEP 660          
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A534LG02_9EURY (RidA family protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A534LG02_9EURY)

HSP 1 Score: 126 bits (316), Expect = 8.680e-35
Identity = 69/122 (56.56%), Postives = 85/122 (69.67%), Query Frame = 0
Query:   11 ISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADAL 132
            ++SG  +E   GYSR VR+G HV VAGTTA  PDG  V+  GD  GQ  +IF  +  AL EA   LE+V+RTRMFVTNID+ +KV   H + F  IRPAAT+L VS L+DP +LVEIEADA+
Sbjct:    6 VASGGRWEPIVGYSRVVRIGNHVAVAGTTATDPDGK-VVAPGDAYGQAVHIFRTMEAALAEAGAQLEDVIRTRMFVTNIDDWEKVGRAHAEFFQQIRPAATLLQVSRLIDPQVLVEIEADAI 126          
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: UPI0019927D90 (RidA family protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=UPI0019927D90)

HSP 1 Score: 120 bits (302), Expect = 1.150e-32
Identity = 71/126 (56.35%), Postives = 87/126 (69.05%), Query Frame = 0
Query:    7 PCQVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADAL 132
            P Q ISSGT +E+T GYSRAVRVG HV V+GTTA    G  V   GDV  Q+QYIF  I  AL EA   L +VVR RMFVT+ID+ + V   H ++F+ IRPA+T++ VS L+DP  LVEIE DA+
Sbjct:    2 PRQNISSGTPWERTVGYSRAVRVGNHVMVSGTTASDEQGV-VQGIGDVYAQSQYIFAKIERALIEAGATLGDVVRVRMFVTDIDHWEAVGKAHGEVFAAIRPASTMVEVSRLIDPAHLVEIEVDAI 126          
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A6I3L542_9NOCA (RidA family protein n=1 Tax=Nocardia aurantiaca TaxID=2675850 RepID=A0A6I3L542_9NOCA)

HSP 1 Score: 120 bits (302), Expect = 1.380e-32
Identity = 67/126 (53.17%), Postives = 90/126 (71.43%), Query Frame = 0
Query:    9 QVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADALEP 134
            Q++SSG  +E   GYSRAVRVG+ V VAGTTA +PD SG +   D+  QT+     IA AL E   ++E+V+RTR+FVT+I   ++V   H ++F+ IRPAAT++ VSAL+DP LLVEIEADA+ P
Sbjct:    5 QIVSSGAQWEPIVGYSRAVRVGQWVSVAGTTAATPD-SGPVGGDDIAEQTREALRRIAAALAEVGASVEDVIRTRIFVTDISRWEEVGKAHGEVFAEIRPAATMVEVSALIDPALLVEIEADAVIP 129          
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A2V9RCU1_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9RCU1_9BACT)

HSP 1 Score: 119 bits (299), Expect = 3.010e-32
Identity = 68/121 (56.20%), Postives = 83/121 (68.60%), Query Frame = 0
Query:   11 ISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADA 131
            ISSGT +E   GYSRAVRVG H+ V+GTTA  PDG   + AGD   Q       IA AL +A   LE+VVRTRMFVTNI + +KV   H ++F  IRPA +++ VSALVDP +LVEIEA+A
Sbjct:    6 ISSGTPWEPVVGYSRAVRVGPHIHVSGTTATGPDGE--IVAGDAYAQAVQTLKNIASALEKAGAKLEHVVRTRMFVTNIADWEKVGRAHGEVFGEIRPATSMVAVSALVDPKMLVEIEAEA 124          
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A386ZLA6_9NOCA (RidA family protein n=1 Tax=Nocardia yunnanensis TaxID=2382165 RepID=A0A386ZLA6_9NOCA)

HSP 1 Score: 119 bits (297), Expect = 6.810e-32
Identity = 68/126 (53.97%), Postives = 88/126 (69.84%), Query Frame = 0
Query:    9 QVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADALEP 134
            QV+SSG  +E   GYSRAVRVG+ V VAGTTA + +G G +   D+  QT+     IA AL E    +ENVVRTR+FVT+I   ++V   H ++F+ IRPAA++L VSAL+DP LLVEIEADA+ P
Sbjct:    8 QVVSSGAVWEPIVGYSRAVRVGQWVSVAGTTAAA-EGGGAVGGDDIAEQTREALRRIAAALAEVGAGVENVVRTRIFVTDISRWEEVGKAHGEVFADIRPAASMLEVSALIDPELLVEIEADAIVP 132          
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A7K1V2Y8_9NOCA (RidA family protein n=1 Tax=Nocardia terrae TaxID=2675851 RepID=A0A7K1V2Y8_9NOCA)

HSP 1 Score: 118 bits (296), Expect = 8.590e-32
Identity = 67/126 (53.17%), Postives = 88/126 (69.84%), Query Frame = 0
Query:    9 QVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADALEP 134
            QV+SSG ++E   GYSRAVRVG+ V VAGTTA +PDG GV+   D+  Q +     I  AL E     E+VVRTR+FVT+I   ++V   H ++F+ IRPAA++L VSAL+DP L+VEIEADA+ P
Sbjct:    4 QVVSSGAAWEPIVGYSRAVRVGQWVSVAGTTAATPDG-GVVGGDDIAEQAREALRRIVAALAEVGAGPEHVVRTRIFVTDISRWEEVGKAHGEVFADIRPAASMLEVSALIDPALMVEIEADAVVP 128          
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: UPI0019B846B8 (RidA family protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI0019B846B8)

HSP 1 Score: 118 bits (296), Expect = 8.840e-32
Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 0
Query:   11 ISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADAL 132
            ISSG S+E   GYSRAVRVG +++V+GTTA++  G  ++ AGD+  QT +IF  I  AL EA C+L++VVRTRMF+TNIDN K+    H + F  I+PA+T++ V  L+ P LL+EIEA A+
Sbjct:    7 ISSGASWEDIVGYSRAVRVGDNIEVSGTTAMN--GDTIIGAGDLYAQTIFIFQKIEKALLEAGCSLKDVVRTRMFITNIDNWKEAGRAHAEFFGAIKPASTMIEVQRLIHPELLIEIEATAI 126          
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Match: A0A7V5WQE4_9DEIN (RidA family protein n=1 Tax=Trueperaceae bacterium TaxID=2026798 RepID=A0A7V5WQE4_9DEIN)

HSP 1 Score: 118 bits (296), Expect = 9.650e-32
Identity = 66/122 (54.10%), Postives = 88/122 (72.13%), Query Frame = 0
Query:   11 ISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLCAGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHNKIFSVIRPAATILVVSALVDPGLLVEIEADAL 132
            ISSG  +EKT GYSRAVRVG  V VAGTT++  DG+ ++   D   QT+ +  IIA AL EA  +L++VVR+RMFVTNID+ + +   H ++F  IRPAAT+L VS L++P +LVEIE DA+
Sbjct:    5 ISSGAVWEKTVGYSRAVRVGNQVFVAGTTSVDKDGN-IVGENDAYLQTKRVLEIIAAALNEAGASLKDVVRSRMFVTNIDDWQAIGKAHGEVFGDIRPAATMLEVSKLINPKMLVEIEVDAI 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18544.5012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU38_ECTSI4.970e-5979.10NMO domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JZB1_9PHAE1.510e-5776.87NMO domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A534LG02_9EURY8.680e-3556.56RidA family protein n=2 Tax=cellular organisms Tax... [more]
UPI0019927D901.150e-3256.35RidA family protein n=1 Tax=Armatimonadetes bacter... [more]
A0A6I3L542_9NOCA1.380e-3253.17RidA family protein n=1 Tax=Nocardia aurantiaca Ta... [more]
A0A2V9RCU1_9BACT3.010e-3256.20Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A386ZLA6_9NOCA6.810e-3253.97RidA family protein n=1 Tax=Nocardia yunnanensis T... [more]
A0A7K1V2Y8_9NOCA8.590e-3253.17RidA family protein n=1 Tax=Nocardia terrae TaxID=... [more]
UPI0019B846B88.840e-3252.46RidA family protein n=1 Tax=Pyrinomonadaceae bacte... [more]
A0A7V5WQE4_9DEIN9.650e-3254.10RidA family protein n=1 Tax=Trueperaceae bacterium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 8..133
e-value: 1.6E-31
score: 111.0
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 9..132
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 19..132
e-value: 6.9E-22
score: 77.7
NoneNo IPR availablePANTHERPTHR43857FAMILY NOT NAMEDcoord: 9..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18544contigH-elongata_contig18544:3681..6862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18544.5012.1mRNA_H-elongata_contig18544.5012.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18544 3681..6862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18544.5012.1 ID=prot_H-elongata_contig18544.5012.1|Name=mRNA_H-elongata_contig18544.5012.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
PLVLPSPCQVISSGTSYEKTAGYSRAVRVGKHVQVAGTTAISPDGSGVLC
AGDVEGQTQYIFHIIALALREADCALENVVRTRMFVTNIDNIKKVMAEHN
KIFSVIRPAATILVVSALVDPGLLVEIEADALEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035959RutC-like_sf
IPR006175YjgF/YER057c/UK114