mRNA_H-elongata_contig1854.5010.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1854.5010.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 279 bits (713), Expect = 7.690e-84 Identity = 183/411 (44.53%), Postives = 225/411 (54.74%), Query Frame = 1
Query: 1 MTWATLINLRTALVDRSGEIYAGRNPCTPDESPIDREDLISEQLEPVTVEVFQELGNMDQMPIQHKMPVETALEKRGAKDARISTGGKEKEHFTLCLACHGRR*SGSSAHHL*GHAVHSADHAGEGQASSATQELHRDRDCHWELYQIPPHSGGHVV--------------------WRAGEEVLRPAGVNALALGELEASPQQRKHHQAE----PEHLDAGRLQVPPRRSFHRRPPEEVQHHRHPDPGRVDSSPPAAGTHAQQAMKRLMRRKDTAYTTTAAIDARTGKLKPLGRGMVSTWCKDSWAAVTPDVVKIFFKICGLTLALDGSEDAAWCVHNFGEGYCQLLQQQRVEWEAAHPGVTLPPLQLPEVTKGEAMSTNPIVTAEK*LEGTLLPPSGGGGSDSDVELLD 1161
M WAT++ LR ALV R+GEIYA R+P PDESPI EDL SEQL V EVF+ELGNMDQ P+QH++PVET LEK GAKDARISTGGKEKE FTL LA S G +G+G+++ L R WE++ GH W +G LRP + + K H+ E DA + + F PGR+ + MKRL+RRK TAY+ +A DAR+GKLKP RG+VSTWCK++W + TP+ VK F ICGLTLALDGSED AWC HNFGE Y LL++QR W A H VTLPPL+LP+V G +NPI A+K +EG LLP SDS+VE+L+
Sbjct: 63 MAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKST-----LPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVI-----F--------------IPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVADE-SDSEVEVLE 446
BLAST of mRNA_H-elongata_contig1854.5010.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 270 bits (689), Expect = 7.380e-79 Identity = 184/405 (45.43%), Postives = 222/405 (54.81%), Query Frame = 1
Query: 1 MTWATLINLRTALVDRSGEIYAGRNPCTPDESPIDREDLISEQLEPVTVEVFQELGNMDQMPIQHKMPVETALEKRGAKDARISTGGKEKEHFTLCLACHGRR*SGSSAHHL*GHAVHSADHAGEGQASSATQELHRDRDCHWELYQIPPHS---GGHVVWRAGE---EVLRPAGVN-ALALGELEASPQQRKHHQAEPEHLDAGRLQVPPRRSFHRRPPE-EVQHHRHPD---------------PGRVDSSPPAAGTHAQQAMKRLMRRKDTAYTTTAAIDARTGKLKPLGRGMVSTWCKDSWAAVTPDVVKIFFKICGLTLALDGSEDAAWCVHNFGEGYCQLLQQQRVEWEAAHPGVTLPPLQLPEVTKGEAMSTNPIVTAEK*LEGTLLPPSGGGGSDSD 1146
+ +ATL+ LRTAL++R+GEIYA RNP ESPI +DL QLE V EVF+ELGNMDQ P+Q +MPVET LEK GAKDARISTGGKEKE FTLCLA AD + + + + IPP + G + R G EVL N + + Q+R + DA + S+ RP V RH PG + + MKRLMRR+ T Y +A D +TGKL+P GRG+VSTWCK+SWAA+T + VK+ FK+CGLTLALDGSED AWC HNFGEGY ++L QQR EW A PGVTLPPLQLPEV+ A NPI TAEK + LLPP G DSD
Sbjct: 236 LAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAV-------------------MAD-----GGKVPLRIIFKGKPF------IPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWY-------DACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFRTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAWCTHNFGEGYREVLVQQRAEWGAQRPGVTLPPLQLPEVSS--ASGANPIATAEKEVTAKLLPPEG----DSD 597
BLAST of mRNA_H-elongata_contig1854.5010.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 256 bits (653), Expect = 7.610e-74 Identity = 186/444 (41.89%), Postives = 230/444 (51.80%), Query Frame = 1
Query: 1 MTWATLINLRTALVDRSGEIYAGRNPCTPDESPIDREDLISEQLEPVTVEVFQELGNMDQMPIQHKMPVETALEKRGAKDARISTG--------------------------GKEKEHFTLCLACHGRR*SGSSAHHL*GHAVHSADHAGEGQASSATQELHRDRDCHWELYQIPPHSGGHVVWRAGEEVLRPAGVNALALGELEASPQQRKHHQAEPEHLDAGRLQVPPRRSFHRRPPEE--VQHHR----------HPDPGRVDSSPPAAGTHA------------------QQAMKRLMRRKDTAYTTTAAIDARTGKLKPLGRGMVSTWCKDSWAAVTPDVVKIFFKICGLTLALDGSEDAAWCVHNFGEGYCQLLQQQRVEWEAAHPGVTLPPLQLPEVTKGEAMST-NPIVTAEK*LEGTLLPPSGGGGSDSDVELLD 1161
M WATL+ LR AL++R+GEIYA R P P ESPI EDL S QLE VT E+F++LGNMDQ P+Q++MPVET LEK GAKDARI+TG GKEKE FTLCLA G G+G+A+ R WE+ +P + H + V ++ G E S D ++ + S+ RP V+ R H D G + + A T + MKRL+R TA+T AA D +TGKL P GRG V+TWCK++WA++TP+ VK FKICGLTLALDGSED AWC+HNFG+GY +LL+QQRVEW A HP VTLPPLQLP+V A ST N I A K LE LLP G DSD+E+ D
Sbjct: 150 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQP-----RKNSIAWEV--LPANRSKHGL-----------PVGGMSFGVQEKS------------WCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP---AESTANHIEAAAKELEAGLLPR----GDDSDIEIED 556
BLAST of mRNA_H-elongata_contig1854.5010.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 248 bits (633), Expect = 1.910e-72 Identity = 177/452 (39.16%), Postives = 221/452 (48.89%), Query Frame = 1
Query: 16 LINLRTALVDRSGEIYAGRNPCTPDESPIDREDLISEQLEPVTVEVFQELGNMDQMPIQHKMPVETALEKRGAKDARISTGGKEKEHFTLCLACHGRR*SGSSAHHL*GHAVHSADHAGEGQASSATQELHRDRDCHWELYQIPPHSGGHVV--------------------WRAGEEVLRPAGVNA-------LALGELEASPQQRKHHQAEPEHLDAGRLQVPPRRSFHRRPPEEVQHHRHPDPGRVDSSPPAAGTHAQQAM--------KRLMRRKDTAYTTTAAIDARTGKLKPLGRGMVSTWCKDSWAAVTPDVVKIFFKICGLTLALDGSEDAAWCVHNFGEGYCQLLQQQRVEWEAAHPGVTLPPLQLPEVTKGE---------------------------------AMSTNPIVTAEK*LEGTLLP--PSGGGGSDSDVELLD 1161
++ LR ALV R+GEIYA R+P PDESPI EDL SEQL V EVF++LGNMDQ P+QH+MPVET LEK GAKDAR+STGG+EKE FTL LA S G +G+G+++ L R WE++ GH W +G LRP + L L + + H D G + R D + P T Q + KRL+R K TAY+ +A DAR+GKLKP RG+VSTWCK +W ++TP+ VK FKICGLTLALDGSED AWC HNFGE Y LL++Q W A HP VTLPPL+LP+V +NPI+ A+K +EG LLP P SDS+VE+L+
Sbjct: 2 VMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKST-----LPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKC-------------HKDEGFIAALKR-----------------DANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSA-SATDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDSNPIMAAQKEVEGKLLPYVPDE---SDSEVEVLE 414
BLAST of mRNA_H-elongata_contig1854.5010.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 254 bits (648), Expect = 2.790e-72 Identity = 177/415 (42.65%), Postives = 223/415 (53.73%), Query Frame = 1
Query: 1 MTWATLINLRTALVDRSGEIYAGRNPCTPDESPIDREDLISEQLEPVTVEVFQELGNMDQMPIQHKMPVETALEKRGAKDARISTGGKEKEHFTLCLACHGRR*SGSSAHHL*GHAVHSADHAGEGQASSATQELHRDRDCHWELYQI-PPHSGGH----------VVWRAGEEVLRPAG--------VNALALGELEASPQQRKHHQAEPE---------HLDAGRLQVPPRRSFHRRPPEEVQHHRHPDPGRVDSSPPAAGTHAQQAMKRLMRRKDTAYTTTAAIDARTGKLKPLGRGMVSTWCKDSWAAVTPDVVKIFFKICGLTLALDGSEDAAWCVHNFGEGYCQLLQQQRVEWEAAHPGVTLPPLQLPEVTKGEAMSTNPIVTAEK*LEGTLLPPSGGGGSDSDVELLD 1161
M WAT++ LR ALV R+GEIYA R+P PDESPI EDL SEQL V EVF+ELGNMDQ P+QH+MPVET LEK GAKDARISTGG+EKE FTL LA S G +G+ +++ L R WE++ SG H ++++ G + P N G + P Q P H D G + R + + V PG + S + MKRL+R K TA + +A DAR+GKL P G+VSTWCK++W ++T V+ FKICGLTLALDGSE AWC HNFGE Y LL++Q W A HP TLPPL+LP+V G +NPI A+K +EG LLP SDS+VE+L+
Sbjct: 245 MAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKST-----LPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFK-GTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGA------KTVIF----IPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHHAWCEHNFGEDYGDLLEEQHAVWLAEHPDDTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVADE-SDSEVEVLE 640
BLAST of mRNA_H-elongata_contig1854.5010.1 vs. uniprot
Match: A0A6H5KVR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR1_9PHAE) HSP 1 Score: 250 bits (638), Expect = 4.150e-71 Identity = 174/404 (43.07%), Postives = 216/404 (53.47%), Query Frame = 1
Query: 1 MTWATLINLRTALVDRSGEIYAGRNPCTPDESPIDREDLISEQLEPVTVEVFQELGNMDQMPIQHKMPVETALEKRGAKDARISTGGKEKEHFTLCLACHGRR*SGSSAHHL*GHAVHSADHAGEGQASSATQELHRDRDCHWELYQIPPHSGGHVVWRAGEEVLRPAGVNALALGELEASPQQRKHHQAEPEHLDAGRLQVPPRRSFHRRPPEEVQHHRHPDPGRVDSSPPAAGT----------------HAQQAMKRLMRRKDTAYTTTAAIDARTGKLKPLGRGMVSTWCKDSWAAVTPDVVKIFFKICGLTLALDGSEDAAWCVHNFGEGYCQLLQQQRVEWEAAHPGVTLPPLQLPEVTKGEAMST-NPIVTAEK*LEGTLLPPSGGGGSDSDVELLD 1161
M W TL+ LR AL++R+GEIYA R P P ESPI EDL S QLE VT E+F+ELGNMDQ P+QH+MPVET LEK G KDARI+TGG A H G S G+G+A+ R WE+ +P + H + V ++ G E S D ++ + S+ RP H+ D G + + A T +RL+R TA+T A D +TGKL P GRG V+TWCK++WA++TP+ VK FKICGLTLALDGSED AWC+HNFG+GY +LL+QQRVEW A HP VTLPPLQLP+V A ST N I A K LE LLP G DSD+E+ D
Sbjct: 270 MAWTTLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLEKTGVKDARIATGGP--------------------AAHFKGTPFVSPATPGKGKATQP-----RKNSIAWEV--LPANRSKHGL-----------PVGGMSFGVQEKS------------WCDLRECKLWIKDSWELRPNNGSICHK--DDGFIAALKREASTIVIFIPGGLTPLLQPLDRMLNKQRLLRGMYTAHTAKAVRDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP---AESTANHIEAAAKELEEWLLPR----GDDSDIEIED 614
BLAST of mRNA_H-elongata_contig1854.5010.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE) HSP 1 Score: 239 bits (610), Expect = 2.920e-67 Identity = 179/414 (43.24%), Postives = 219/414 (52.90%), Query Frame = 1
Query: 1 MTWATLINLRTALVDRSGEIYAGRNPCTPDESPIDREDLISEQLEPVTVEVFQELGNMDQMPIQHKMPVETALEKRGAKDARISTGGKEKEHFTLCLACHGRR*SGSSAHHL*GHAVHSADHAGEGQASSATQELHRDRDCHWELYQIP---PHSGGHVVWRAGEEVLRPAGVNALALGELEASPQQRKHHQAEPEHLDAGRLQVPPRRSFHRRPP-----EEVQHHRHPDPGRVDSSPPAAGTHA------------------QQAMKRLMRRKDTAYTTTAAIDARTGKLKPLGRGMVSTWCKDSWAAVTPDVVKIFFKICGLTLALDGSEDAAWCVHNFGEGYCQLLQQQRVEWEAAHPGVTLPPLQLPEVTKGEAMST-NPIVTAEK*LEGTLLPPSGGGGSDSDVELLD 1161
M WATL+ LR AL++R+GEIYA R P P ESPI EDL S QLE VT E+F+ELGNMDQ P+QH+MPVET LEK GAKDARI+TG EK A RR + S A S P P +G W A P+GV + +L K D+ +L+ P S R+ ++ + H+ D G + + A T + MKRL+R TA T AA D +TG L P GRG V+TWCK++WA++TP+ VK FKICGLTLALDGSED AWC+HNFG+GY +LL+QQRVEW A HP VTLP LQLP+V A ST N I A K LE LLP G DSD+E+ D
Sbjct: 212 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLEKAGAKDARIATGAGEKRRNASRSAWLPRRMARSRL------ASSSRVRLSFRLPRPGXXXXXXXXXXXXXXXYFPRTAPSTGS--PWEAC-----PSGVQEKSWCDLRECKLWIK---------DSWKLR-PNNGSIVRQRRCILVLDDFKCHK--DDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVP---AESTANHIEAAAKELEAGLLPC----GDDSDIEIED 593
BLAST of mRNA_H-elongata_contig1854.5010.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 242 bits (617), Expect = 2.150e-65 Identity = 193/493 (39.15%), Postives = 236/493 (47.87%), Query Frame = 1
Query: 1 MTWATLINLRTALVDRSGEIYAGRNPCTPDESPIDREDLISEQLEPVTVEVFQELGNMDQMPIQHKMPVETALEKRGAKDARISTGGKEKEHFTLCLACHGRR*SGSSAHHL*GHAVHSADHAGEGQA------SSATQELHRDRDCH------------------------W--ELYQIPPHSGGHVVWRAGEEVLR-------------------------PAGVNALALGELEASPQQRK---------HHQAEPEHLDAGRLQVPPRR---------SFHRRPPEEVQ------------------------------HHRHPDPGRVDSSPPAAGTHAQQAMKRLMRRKDTAYTTTAAIDARTGKLKPLGRGMVSTWCKDSWAAVTPDVVKIFFKICGLTLALDGSEDAAWCVHNFGEGYCQLLQQQRVEWEAAHPGVTLPPLQLPEVTKGEAMST-NPIVTAEK*LEGTLLPPSGGGGSDSDVELLD 1161
M WATL+ LR AL++R+GEIYA R P P ESPI EDL S QLE VT E+F+ELGNMDQ P+QH+MPVET LE GAKDARI+TGGKEKE FTLCLA G G+G+A S A + L +R H W + +++ P++G V R VL P G+ L +Q K H G+L VPP R ++ PE V+ + MKRL+R TA+T AA D + GKL P GRG V+TWCK++WA++TP++VK FKICGLTLALDGSED AWC+HNFG+GY +LL+QQRVEW A HP VTLPPLQLP+V A ST N I A K LE LLP G DSD+E+ D
Sbjct: 217 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKL-VPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKPGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP---AESTANHIEAAAKELEAGLLPR----GDDSDIEIED 701
BLAST of mRNA_H-elongata_contig1854.5010.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE) HSP 1 Score: 240 bits (613), Expect = 6.390e-65 Identity = 181/474 (38.19%), Postives = 229/474 (48.31%), Query Frame = 1
Query: 1 MTWATLINLRTALVDRSGEIYAGRNPCTPDESPIDREDLISEQLEPVTVEVFQELGNMDQMPIQHKMPVETALEKRGAKDARISTGGKEKEHFTLCLACH-----------------------GRR*SGSSAHHL*GHAVHSADHAGEGQASSATQELHRD------RDCH-W--ELYQIPPHSGGHVVWRAGEEVLRPAGVNALALGELEASPQQRKHHQAEPEHLDAGRLQVPPRRSFHRRPPEEVQHHRHPDPGRVDSSPPAAGTHAQQAMKRLMR------------------------------------------------RKDTAYTTTAAIDARTGKLKPLGRGMVSTWCKDSWAAVTPDVVKIFFKICGLTLALDGSEDAAWCVHNFGEGYCQLLQQQRVEWEAAHPGVTLPPLQLPEVTKGEAMSTNPIVTAEK*LEGTLLPPSGGGGSDSDVELLDDGIDLKV 1182
+ +ATL+ LRTAL++R+GEIYA RNP ESPI +DL QLE V +VF+ELGNMDQ P+Q +MPVET LEKRG KDARISTGGKEK+ FT CLA GR + + V A+ G S + ++ R+C W E ++ P+ G + R + L L + H++E D RR V PG + + MKRLMR T Y +A D +TGKL+P GRG+VST K+SWAA+TP+ VK+ FK+CGLTLALDGSED AW HNFGEGY ++L QQ EWEA HPGVTLPPLQLPEV+ A NPI TAEK + LLPP G SD +VE++D D+++
Sbjct: 132 LAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRH----------SILVLDDFRC-------HRSESFVKD-----------LRRRTNTTVIL----IPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSEDDAWGTHNFGEGYREVLVQQHAEWEAQHPGVTLPPLQLPEVSS--APGANPIATAEKEVTAKLLPPEGD--SDDEVEIIDGDSDVEL 569
BLAST of mRNA_H-elongata_contig1854.5010.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 228 bits (581), Expect = 2.310e-63 Identity = 168/418 (40.19%), Postives = 214/418 (51.20%), Query Frame = 1
Query: 1 MTWATLINLRTALVDRSGEIYAGRNPCTPDESPIDREDLISEQLEPVTVEVFQELGNMDQMPIQHKMPVETALEKRGAKDARISTGGKEKEHFTLCLACHGRR*SGSSAHHL*GHAVHSADHAGEGQASSATQELHRDRDCHWELYQIPPHSGGHVVWRAGEEVLRPAGVNALALGELEASPQQRKHHQAEPEHLDAGRLQVPPRRSFHRRPPEE--VQHHR----------HPDPGRVDSSPPAAGTHA------------------QQAMKRLMRRKDTAYTTTAAIDARTGKLKPLGRGMVSTWCKDSWAAVTPDVVKIFFKICGLTLALDGSEDAAWCVHNFGEGYCQLLQQQRVEWEAAHPGVTLPPLQLPEVTKGEAMST-NPIVTAEK*LEGTLLPPSGGGGSDSDVELLD 1161
M WATL+ LR AL++R+G+IYA R P P E+PI EDL S QLE VT E+F+ELGNMDQ P+QH+ PVE + + R +E FTLCLA G G+G+A+ R WE+ +P + H + V ++ G E S D ++ + S+ RP V+ R H D G + + A T + MKRL+R TA+T AA D +TGKL P GRG V+TWCK++WA++TP+ K FKICGLTLALDGSED AWC+HNFG+GY +LL+QQRVEW A HP VTLPPLQLP+V A ST N I A K LE LLP G DSD+E+ D
Sbjct: 187 MAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVERLWK----RPVRRMPASPPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQP-----RKNSIAWEV--LPANRSKHGL-----------PVGGMSFGVQEKS------------WCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP---AESTANHIEAAAKELEAGLLPR----GDDSDIEIED 563 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1854.5010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1854.5010.1 >prot_H-elongata_contig1854.5010.1 ID=prot_H-elongata_contig1854.5010.1|Name=mRNA_H-elongata_contig1854.5010.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp MTWATLINLRTALVDRSGEIYAGRNPCTPDESPIDREDLISEQLEPVTVEback to top mRNA from alignment at H-elongata_contig1854:4791..7001+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1854.5010.1 ID=mRNA_H-elongata_contig1854.5010.1|Name=mRNA_H-elongata_contig1854.5010.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2211bp|location=Sequence derived from alignment at H-elongata_contig1854:4791..7001+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1854:4791..7001+ >mRNA_H-elongata_contig1854.5010.1 ID=mRNA_H-elongata_contig1854.5010.1|Name=mRNA_H-elongata_contig1854.5010.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=624bp|location=Sequence derived from alignment at H-elongata_contig1854:4791..7001+ (Himanthalia elongata Himel1 dioecious)back to top |