mRNA_H-elongata_contig18535.5007.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18535.5007.1
Unique NamemRNA_H-elongata_contig18535.5007.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig18535.5007.1 vs. uniprot
Match: A0A6H5KW18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW18_9PHAE)

HSP 1 Score: 794 bits (2051), Expect = 8.000e-279
Identity = 399/619 (64.46%), Postives = 472/619 (76.25%), Query Frame = 1
Query:    1 SLFHILAQTQKVDRKMLLDQIELEKAAIAGDPEACIAAITINSDPEISFRTPYEFIYAKYDQAQNIQNLYFKSGGMWHPFHSVVRLSIVIDILKAPMCLGGAGLDLDTMKLKEEIVAFFPKHAEKRKHDLYKKWLVLMQWPWKAPYDQIKDYFGEKIGLYFHFLGHLIAWLIPLGLAGFITALTVYISDNDEHAITLAFAVIVVFWSITMLEFWKRKEKHVALEWGMVDFERGEHTRPEYKGELINSPIDGRKILYYPSNERLWRARKASIVTLSMILIVISCIAAVYTVR--------------------------------------------WYLLYKTSRDWAETWGDTIASIINSVQIQILNHFYKKFAVALTDFENHRTTTEYEDSLIFKLFSFTFCNSYGGLIYLAFIGEPIFGLECEPSCMTLIATNLTIVFIVELVVGNLTEVLLPCIKFYMSVKAEKGGNGKAFVG-------RSKRTEAEKGRHLEQYDPIMGTMMDYAELAVQFGYITLFVVAFPLAPFLALISDYVEFRLDGFKLLTQMQRPVPRGAEDIGSWQQVFTAITCIAVITNSALVCLVYNDLVGTYSLSTRLWLFILCQWIAFTFMAAL 1704
            S+  ++    +V+RKMLLD+ +L +AA AGDPEA IA ITIN+DP ISFR+PYE+IYA+YD+  ++Q+LY+KS GMWHPF +VVRLSI IDILKAPMCLGGAGL +D +KL+ +I+A FPKH ++ K  L   WLV  QWPW+ PY+QIKDY+GEKIGLYFHFLGHL  WLIPLG+AG ITA+TVYIS N+EH ITL FA IVVFW+I MLEFWKRKEK VALEWGM+ FE  E  RPEYKGE I SPIDG+ ILYYP++++ W++R+A+ V +SM+ IV+ CIAAVY  R                                            WYL+Y TS DW E WG  + S+INS+QIQ+LN  YKK AVALTDFENHRT+TEYEDSL+ KLF FTFCNSYGG IYLAFIGEP+ G+ CE SCM+L+ATNLTIVF+V+LVVGNLTEVL+P IK+ M VK EK G+G    G         +RT+AEKG +LEQYDPIMG +MDYAELAVQFGYITLFVVAFPLAP LAL ++YVE R D FKLLTQMQRPVPRGAEDIGSWQ VFT I+CIAV+TNSAL+CL+Y DLVG YSL+TRLWLFIL QW+AF FMA L
Sbjct:  268 SVERLMQYADQVNRKMLLDRFQLSEAAAAGDPEAKIAPITINNDPNISFRSPYEYIYARYDRRPDLQHLYYKSDGMWHPFRAVVRLSISIDILKAPMCLGGAGLPVDKLKLQGKILALFPKHFKQNKLRLRNNWLVAKQWPWETPYEQIKDYYGEKIGLYFHFLGHLTTWLIPLGVAGLITAMTVYISGNEEHVITLIFAPIVVFWAIAMLEFWKRKEKRVALEWGMIGFENDEQARPEYKGEFIPSPIDGKTILYYPTHKKAWKSRRATAVIVSMVTIVVGCIAAVYAFRQGMFCGLNCFHLHTLVLHTAALSSRVGGSVGLYMSCLMMVSLRRWYLVYGTSGDWGEQWGGIVTSVINSIQIQVLNAVYKKVAVALTDFENHRTSTEYEDSLVSKLFCFTFCNSYGGFIYLAFIGEPVIGVACEKSCMSLLATNLTIVFVVQLVVGNLTEVLIPFIKYTMRVKTEKRGDGYGHDGVPVVSGKNIQRTQAEKGLYLEQYDPIMGALMDYAELAVQFGYITLFVVAFPLAPLLALANNYVEARSDAFKLLTQMQRPVPRGAEDIGSWQGVFTTISCIAVVTNSALICLIYEDLVGEYSLATRLWLFILFQWLAFIFMAGL 886          
BLAST of mRNA_H-elongata_contig18535.5007.1 vs. uniprot
Match: D7FQE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE1_ECTSI)

HSP 1 Score: 531 bits (1367), Expect = 6.750e-183
Identity = 263/366 (71.86%), Postives = 304/366 (83.06%), Query Frame = 1
Query:  628 MLEFWKRKEKHVALEWGMVDFERGEHTRPEYKGELINSPIDGRKILYYPSNERLWRARKASIVTLSMILIVISCIAAVYTVRWYLLYKTSRDWAETWGDTIASIINSVQIQILNHFYKKFAVALTDFENHRTTTEYEDSLIFKLFSFTFCNSYGGLIYLAFIGEPIFGLECEPSCMTLIATNLTIVFIVELVVGNLTEVLLPCIKFYMSVKAEKGGNGKAFVG-------RSKRTEAEKGRHLEQYDPIMGTMMDYAELAVQFGYITLFVVAFPLAPFLALISDYVEFRLDGFKLLTQMQRPVPRGAEDIGSWQQVFTAITCIAVITNSALVCLVYNDLVGTYSLSTRLWLFILCQWIAFTFMAAL 1704
            MLEFWKRKEK VALEWGM+ FE  E  RPEYKGE I SPIDG+ +LYYP++++ W++R+A+ V +SMI IV+ CIAAVY  RWYL+Y TS DW ETWG  + S+INS+QIQ+LN  YKK AVALTDFENHRT+TEYEDSL+ KLF FTFCNSYGG IYLAFIGEP+ G+ CE SCM+L+ATNLTIVF+V+LVVGNLTEVL+P IK+ M VKAEK G+G    G         +RT+AEKG +LEQYDPIMG +MDYAELAVQFGYITLFVVAFPLAP LAL ++YVE R D FKLLTQMQRPVPRGAEDIGSWQ VFT I+CIAV+TNSAL+CL+Y DLVG YSL+TRLWLFIL QW+AF FMA L
Sbjct:    1 MLEFWKRKEKRVALEWGMIGFENDEQARPEYKGEFIPSPIDGKTVLYYPTHKKAWKSRRATAVIVSMITIVVGCIAAVYAFRWYLVYGTSGDWGETWGGIVTSVINSIQIQVLNAVYKKVAVALTDFENHRTSTEYEDSLVSKLFCFTFCNSYGGFIYLAFIGEPVIGVACEKSCMSLLATNLTIVFVVQLVVGNLTEVLIPFIKYTMRVKAEKRGDGHGHDGVPVVSGKNIQRTQAEKGLYLEQYDPIMGALMDYAELAVQFGYITLFVVAFPLAPLLALANNYVEARSDAFKLLTQMQRPVPRGAEDIGSWQGVFTTISCIAVVTNSALICLIYEDLVGEYSLATRLWLFILFQWVAFIFMAGL 366          
BLAST of mRNA_H-elongata_contig18535.5007.1 vs. uniprot
Match: D8LEZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ6_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 6.890e-126
Identity = 228/561 (40.64%), Postives = 330/561 (58.82%), Query Frame = 1
Query:   22 QTQKVDRKMLLDQIELEKAAIAGDPEACIAAITINSDPEISFRTPYEFIYAKYD-QAQNIQNLYFKSGG-----MWHPFHSVVRLSIVIDILKAPMCLGGAGLDLDTMKLKEEIVAFFPKHAEKRKHDLYKKWLVLMQWPWKAPYDQIKDYFGEKIGLYFHFLGHLIAWLIPLGLAGFITALTVYISDNDEHAITLA-FAVIVVFWSITMLEFWKRKEKHVALEWGMVDFERGEHTRPEYKGELINSPIDGRKILYYPSNERLWRARKASIVTLSMILIVISCIAAVYTVRWYLLYKTSRDWAETWGDTIASII----NSVQIQILNHFYKKFAVALTDFENHRTTTEYEDSLIFKLFSFTFCNSYGGLIYLAFIGEPIFGLECEPSCMTLIATNLTIVFIVELVVGNLTEVLLPCIKFYMSVKAEKGGNG--KAFVGRSKRTEAEKGRHLEQYDPIMGTMMDYAELAVQFGYITLFVVAFPLAPFLALISDYVEFRLDGFKLLTQMQRPVPRGAEDIGSWQQVFTAITCIAVITNSALVCLVYNDLVGTYSLSTRLWLFI 1665
            +  +V  K+LLD   L      G P    A+I I  +   S    YE+IYA Y      +++LY K GG     M  PF    RL ++  IL A     G  LD+  +   + ++AFFP H +     L +KWL   + PWK P D +K+YFGEKIGLYF +LGH   WLIP  + G +  + V +S ND +A+  A F++ +  W+    EFWKRK+   A+ WGM  FE  E TRP+YKG   +S IDG+ + Y+P +E   R   +  V L +IL+VI  +A+++ ++++L         + WG + A+II    N+VQIQ++N FY   A+ LTD ENHRT TEYED+LI K F F F NSY  L+Y+AFI E I G  C  SCM  ++TNL+ VF+  L VGNL+EV+LP +K     + E  G+   + F G       E+    E YD ++GT  DYAE+ +QFGY TLFV A+PL+  +AL+++Y+E R+D +KL    +RP PRGAEDIG+W  + T ++ +AV++NSA+V    +++    + +TR+W+F+
Sbjct:   60 EADRVGYKILLDANNLRSTCQHGRPGKW-ASIVIQDEYNESPYEAYEYIYAPYTVDRPELESLYKKHGGLEREVMMIPFRGTDRLKLLYSILVAKTADSGCNLDILRLVKSKCLLAFFPLHDKVELRALQRKWLQYFRPPWKEPIDDVKNYFGEKIGLYFLWLGHYTTWLIPASIVGVMAWVHVALSGNDPNALGSALFSIFIGLWTTLFTEFWKRKQARCAMRWGMSGFEEQEQTRPQYKGIRSSSTIDGKPMDYFPPSESRKRFIFSQTVILGLILVVIGVVASIFWLKYFLTQPAQSSALDVWGVSFATIIPPLVNAVQIQVMNAFYGTVAIKLTDLENHRTDTEYEDNLIAKTFMFQFVNSYASLVYIAFIKE-IIGNPCLVSCMNELSTNLSTVFLARLAVGNLSEVVLPILKARRRQREETMGSDPERTFSG------PEREYIKETYDVMLGTFKDYAEMIIQFGYATLFVAAYPLSCLMALVNNYIEIRIDAWKLCQVSRRPEPRGAEDIGTWHTILTIMSSMAVVSNSAIVAFT-SEIFHNQTWTTRVWIFL 611          
BLAST of mRNA_H-elongata_contig18535.5007.1 vs. uniprot
Match: A0A5D6Y6A3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6A3_9STRA)

HSP 1 Score: 378 bits (971), Expect = 2.510e-119
Identity = 226/566 (39.93%), Postives = 311/566 (54.95%), Query Frame = 1
Query:    1 SLFHILAQTQKVDRKMLLDQIELEKAAIAGDPEACIAAITINSDPEISFRTPYEFIYAKYDQAQNIQNLYFKSGGMWHPFHSVVRLSIVIDILKAPMCLGGAGLDLDTMKLKEEIVAFFPKHAEKRKHDLYKKWLVLMQWPWKAPYDQIKDYFGEKIGLYFHFLGHLIAWLIPLGLAGFITALTVYISDNDEHAITLAFAVIVVFWSITMLEFWKRKEKHVALEWGMVDFERGEHTRPEYKGELINSPIDGRKILYYPSNERLWRARKASIVTLSMILIVISCIAAVY------TVRWYLLYKTSRDWAETWGDTIASIINSVQIQILNHFYKKFAVALTDFENHRTTTEYEDSLIFKLFSFTFCNSYGGLIYLAFIGEPIFGLECEP---SCMTLIATNLTIVFIVELVVGNLTEVLLPCIKFYMSVKAEKGGNGKAFVG--RSKRTEAEKGRHLEQYDPIMGTMMDYAELAVQFGYITLFVVAFPLAPFLALISDYVEFRLDGFKLLTQMQRPVPRGAEDIGSWQQVFTAITCIAVITNSALVCLVYNDLVGTYSLSTRLWLFI 1665
            SL  +  +  +++ K+  DQ E+ K A  G PE  IA I+I+   +IS R P++ ++A+YD    +Q  Y K G    PF  V R+ ++++I+KA +  GG  L+L  ++ KE IVA FP H       L  KW      PW  P + IKDYFGEK+GLYF +LGH   WLI   L G    ++V +    +  +   + + +  WS    E+WKR    +ALEWGM +FE  E  RPE+ GE I SP+DG K  Y+    R  R   +      +IL+VI C+A +Y      T RW   +  +       G  +AS IN+VQI ILN  Y   A  L ++ENHRT TEYED LI K F F F NSY  L Y+AFI     G  C+     CM  +   L I+F++ L  GN  EV LP IK  +   A  GG+ +      R +++E E+   L+ YD   GT  DY E+ +QFGY+TLFVV FPLAP LAL+++Y E R+D  KL+   +RP PRGA+DIG+W  +   ++ I+V+TN ALVC          S   RLWLF+
Sbjct:  105 SLERLGKEADRINYKVEFDQAEIRKIAERGYPEQGIAPISIDDSKKISHRDPFQNLFARYDVDPRLQPAYRKYGPKKIPFRGVDRVKLLLNIMKANVTDGGCALNLKDLETKECIVAAFPLHNFTELKALKDKWFSWKFAPWGQPIELIKDYFGEKVGLYFAWLGHFTTWLIAPSLIGICVFISVLVQGTADSNLVPYYGLFMALWSTFYYEYWKRYNSVLALEWGMSNFEEEEVERPEFSGEEITSPVDGSKTRYFNPQLRFRRIMGSLFFVFVLILLVIGCVAGIYVFRFAATGRWKAFFTIN---GTEIGGAVASTINAVQIMILNQMYSGMAAKLNEYENHRTDTEYEDHLIAKTFLFQFVNSYSSLFYVAFIKNAAEGNTCKGHHHGCMDELMLALGIIFVLRLTSGNFFEVGLPWIKRKL---AHPGGSKELMKNAVRREQSEVERQMKLDVYDQ-RGTFDDYNEMIIQFGYVTLFVVGFPLAPALALLNNYFEIRIDAHKLVNATRRPDPRGAQDIGTWGTIIEIMSAISVVTNVALVCFTSKRTTEALSEYDRLWLFV 663          
BLAST of mRNA_H-elongata_contig18535.5007.1 vs. uniprot
Match: K3W8D0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8D0_GLOUD)

HSP 1 Score: 375 bits (964), Expect = 2.760e-118
Identity = 224/565 (39.65%), Postives = 314/565 (55.58%), Query Frame = 1
Query:    1 SLFHILAQTQKVDRKMLLDQIELEKAAIAGDPEACIAAITINSDPEISFRTPYEFIYAKYDQAQNIQNLYFKSGGMWHPFHSVVRLSIVIDILKAPMCLGGAGLDLDTMKLKEEIVAFFPKHAEKRKHDLYKKWLVLMQWPWKAPYDQIKDYFGEKIGLYFHFLGHLIAWLIPLGLAGFITALTVYISDNDEHAITLAFAVIVVFWSITMLEFWKRKEKHVALEWGMVDFERGEHTRPEYKGELINSPIDGRKILYYPSNERLWRARKASIVTLSMILIVISCIAAVYTVRWYLLYKTSRDWAETW-------GDTIASIINSVQIQILNHFYKKFAVALTDFENHRTTTEYEDSLIFKLFSFTFCNSYGGLIYLAFIGEPIFGLEC---EPSCMTLIATNLTIVFIVELVVGNLTEVLLPCIKFYMSVKAEKGGNGKAFVGRSKRTEAEKGRHLEQYDPIMGTMMDYAELAVQFGYITLFVVAFPLAPFLALISDYVEFRLDGFKLLTQMQRPVPRGAEDIGSWQQVFTAITCIAVITNSALVCLVYNDLVGTYSLSTRLWLFI 1665
            +L  I  +  ++D K+  D +E++K A AG  E  I  I I  D  +S R  ++ I+AKYD  + +Q  Y K G    PF  V R+ ++++I+KA +  GG  L+L+ ++  + IVA FP H  +   +L KKW      PW  P  +IKDYFGEK+GLYF +LGH   WLI   L G +  L+V +    +      F + +  WS    E+WKR    +ALEWGM  FE  E  RPE++GE I SP+DG +  Y+   +R  R   +      +IL+VI CI+ ++  R    Y  +  W + +       G  +AS IN+VQI ILN+ Y   A  L +FENHRT TE+ED LI K F F F NSY  L Y+AFI     G +C   E  CM  +   L I+F++ L  GN  EV LP IK  ++   +     K  V R + +E E+   L+ YD   GT  DY E+ +QFGY+TLFVV FPLAP LAL++++ E R+D  KL+   +RP PRGA+DIG+W  +   ++ I+V+TN ALVC          S   RLWLF+
Sbjct:  106 TLARIGKEADRIDYKVEFDPMEIQKIAEAGYEEQGIGRILIQDDKHVSKRGAFDNIFAKYDTEERLQVAYRKYGHKKIPFRGVDRIKLLLNIIKAHITEGGCALNLNELETNKCIVAAFPLHNFEELAELKKKWFSWKFAPWGQPLVEIKDYFGEKVGLYFAWLGHYTTWLIMPSLVGILVFLSVIVESTADSNFVPYFGLFMALWSTFYYEYWKRYNSTLALEWGMSSFEDEEVERPEFEGEWIQSPVDGSRTRYFSPQQRFRRIMGSLFFVFILILLVIGCISGIFIFR----YAATNQWKDFFTINGTQIGGPVASTINAVQIMILNNLYSGMASKLNNFENHRTDTEFEDHLIGKTFLFQFVNSYASLFYVAFIKSAAEG-KCKGYEDGCMDELMMGLGIIFVLRLTSGNFFEVGLPWIKQQLANVNQLSELAKNAV-RREPSEIERQMRLDVYDQ-RGTFDDYNEMIIQFGYVTLFVVGFPLAPALALLNNFFEIRIDAHKLVHATRRPDPRGAQDIGTWGTIIEVMSSISVVTNVALVCFTSKRTTHNMSDYHRLWLFV 663          
BLAST of mRNA_H-elongata_contig18535.5007.1 vs. uniprot
Match: A0A7S2G4I0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4I0_9STRA)

HSP 1 Score: 375 bits (963), Expect = 8.890e-118
Identity = 224/588 (38.10%), Postives = 327/588 (55.61%), Query Frame = 1
Query:   19 AQTQKVDRKMLLDQIELEKAA-------IAGDPEACIAAITINSDPEIS-----FRTPYEFIYAKYDQAQNIQNLYFKSGGMWHPFHSVVRLSIVIDILKAPMCLGGAGLDLDT-MKLKEE------------IVAFFPKHAEKRKHDLYKKWLVLMQWPWKAPYDQIKDYFGEKIGLYFHFLGHLIAWLIPLGLAGFITALTVYISDNDEHAITLAFAVIVVFWSITMLEFWKRKEKHVALEWGMVDFERGEHTRPEYKGELINSPIDGRKILYYPSNERLWRARKASIVTLSMILIVISCIAAVYTVRWYLLYKTSRDWAETWGDTIASIINSVQIQILNHFYKKFAVALTDFENHRTTTEYEDSLIFKLFSFTFCNSYGGLIYLAFIGEPIFGLECEP-SCMTLIATNLTIVFIVELVVGNLTEVLLPCIKFYMSVKAEKGGNGKAFVGRSKRTEAEKGRHLEQYDPIMGTMMDYAELAVQFGYITLFVVAFPLAPFLALISDYVEFRLDGFKLLTQMQRPVPRGAEDIGSWQQVFTAITCIAVITNSALVCLVYNDLVGTYSLSTRLWLFILCQWIAFTFMAAL 1704
            AQ   +D K+ +D  ELEKA        +  DP   I        P +      F T Y++I+ KY+     Q LY K  G+ HPFHS  R+ +++ +++     GGA +++   M  KEE            ++  FP H     +DLYKKW+V  QWPW  P +Q++ Y GEK GLYF FL H  AWL+ + + G I  +  YI  + + +    FAV V  W++ MLE WK KE   AL+WGM DFE  E  RPE+ G L  SP+DG K+ ++P ++R     K+  +   M+L+V++ I  V+ +      K + D   T    + SI  +V IQ+LN  Y+  AV +TD ENH+T T+YED+L+ KL+ FTF NSY  L ++AFI E    L CE  SC+  +A ++ ++FI  LVVGN TE+L+P +        E  G G+    + K + AE    LE YDP   T+ D+  ++++ GY+ LF VAFP+APF+A +S+YV+ R DG+KL    +R  P GA+DIG W  +F   T  +VI+N+ +V  ++      Y LSTR+W+FIL Q++    M  L
Sbjct:  120 AQAALLDYKVKMDPKELEKATALHFEKVLKDDPSDTIDG----KGPHLGAFDGRFGT-YDYIFCKYEDEDEKQPLYAKGDGLSHPFHSTHRIKLLVTMIQGETFRGGADINIGACMAAKEECEDTENPSGGFGMLEQFPLHDPAVVNDLYKKWVVKWQWPWDQPVEQLRMYLGEKAGLYFGFLVHYTAWLMGIAVFGLIVQIDTYIEYSIQASTVPYFAVFVCVWAVLMLEDWKNKEATYALKWGMSDFESTEQDRPEFNGNLQWSPVDGEKMTFFPDSQRQKAMNKSYSIIFCMLLLVLASIGGVFAI------KIALDGNATLESIVPSITQAVVIQVLNAVYRTMAVGMTDSENHQTDTQYEDNLVAKLYMFTFVNSYSALYFIAFI-EGWTSLGCEKGSCLNYLAYSMMVLFITNLVVGNATEILVPLLAQRAKAAKESEGTGE----KQKMSVAELQYTLETYDPTESTIEDFTTISIELGYVVLFAVAFPVAPFMAAVSEYVQIRTDGWKLCRAYKRCQPIGAQDIGIWASIFQLTTYASVISNAGIV--MFTGTWFPYKLSTRIWMFILFQYVLVALMTGL 689          
BLAST of mRNA_H-elongata_contig18535.5007.1 vs. uniprot
Match: A0A024UWI9_9STRA (Anoct_dimer domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UWI9_9STRA)

HSP 1 Score: 372 bits (956), Expect = 2.640e-117
Identity = 219/577 (37.95%), Postives = 324/577 (56.15%), Query Frame = 1
Query:    1 SLFHILAQTQKVDRKMLLDQIELEKAAIAGDPEACIAAITINSDPEISFRTPYEFIYAKYDQAQNIQNLYFKSGGMWHPFHSVVRLSIVIDILKAPMCLGGAGLDLDTMKLKEEIVAFFPKHAEKRKHDLYKKWLVLMQWPWKAPYDQIKDYFGEKIGLYFHFLGHLIAWLIPLGLAGFITALTVYISDNDEHAITLAFAVIVVFWSITMLEFWKRKEKHVALEWGMVDFERGEHTRPEYKGELINSPIDGRKILYYPSNERLWRARKASIVTLSMILIVISCIAAVYTVRWYLLYKTSRDWAETWGDT-----IASIINSVQIQILNHFYKKFAVALTDFENHRTTTEYEDSLIFKLFSFTFCNSYGGLIYLAFIGEPIFGLEC-EPS---CMTLIATNLTIVFIVELVVGNLTEVLLPCIKFYMSVKAEKGGNGKAFVGRSKRTEAEKGRHLEQYDPIMGTMMDYAELAVQFGYITLFVVAFPLAPFLALISDYVEFRLDGFKLLTQMQRPVPRGAEDIGSWQQVFTAITCIAVITNSALVCLVYNDLVGTYSLSTRLWLFILCQWIAFTFMAAL 1704
            SL  +  +  ++D K+  D  EL++ A AG  +  IA I I  D +++ R  ++ I+AK+D    +Q LY K G    PF  V R+ +++ I+ A    GG  L++ T+ LK  +V  +  H E+ +  + KKW+     PW+ P+  IKDY+GEK+GLYF +LGH   WLI   + G    + + I    +  +  AF + +  W    LE WKR+   V LEWGM  FE  +  R E+ GE + SP+DGR + Y+   ++  R   + I    +IL+VI  +AA++  R++     + +   T         I + +N+VQIQ++N  Y   AV L ++ENHRT TEYED+LI K F F F NSY  L Y+AFI   I   EC +P+   C+  +  +L I+F + L  GN  E +LP +K  M+ +  K  + +  V R   + AE+  HL  YD  MG   DY E+ +QFGYITLFVV+FPLAPFLAL+++Y E R+D FKL  + +RP P GAEDIG+WQ +   +  I+V+TN A V  V N      S+ T+LW F++ + +   F  AL
Sbjct:   84 SLERLCKEADRIDLKLEFDADELKRVAEAGYADRGIAPIRIKDDAKLTHRKAFDNIFAKFDMEPRLQPLYKKYGHKKIPFRGVDRIKLILSIIHASTTDGGCHLNITTLTLKNCLVTAYALHDEEEQEAVTKKWINWSSLPWQQPFSDIKDYYGEKVGLYFVWLGHYTTWLIGPSIVGIAMLVDIVIERTVDARLISAFGLFMALWGTVYLESWKRRNSVVKLEWGMDGFEEEQEDRAEFDGEEVESPVDGRPMRYFSPAKQRSRVCASLIFIFMLILMVIGAVAAIFVFRYFARKGHALESLVTINGINLSAPIGATLNAVQIQVMNGIYGTIAVRLNNYENHRTDTEYEDNLIAKTFLFQFVNSYASLFYIAFIKNSIPDNECSDPAKGGCIYDLMFSLGIIFGLRLTSGNFFEAVLPYLKRKMAARFRKTDSPEDGVQRH-LSVAEEQMHLGVYDN-MGIFADYNEMIIQFGYITLFVVSFPLAPFLALLNNYFEIRIDAFKLAKESRRPNPHGAEDIGTWQTILEIMGTISVLTNVAAVVFVSNHTFSGVSMETKLWTFVVVEHLILLFKYAL 658          
BLAST of mRNA_H-elongata_contig18535.5007.1 vs. uniprot
Match: W4H6I1_9STRA (Anoct_dimer domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6I1_9STRA)

HSP 1 Score: 372 bits (955), Expect = 6.810e-117
Identity = 213/573 (37.17%), Postives = 319/573 (55.67%), Query Frame = 1
Query:    1 SLFHILAQTQKVDRKMLLDQIELEKAAIAGDPEACIAAITINSDPEISFRTPYEFIYAKYDQAQNIQNLYFKSGGMWHPFHSVVRLSIVIDILKAPMCLGGAGLDLDTMKLKEEIVAFFPKHAEKRKHDLYKKWLVLMQWPWKAPYDQIKDYFGEKIGLYFHFLGHLIAWLIPLGLAGFITALTVYISDNDEHAITLAFAVIVVFWSITMLEFWKRKEKHVALEWGMVDFERGEHTRPEYKGELINSPIDGRKILYYPSNERLWRARKASIVTLSMILIVISCIAAVYTVRWYLLYKTSRDWAETWGDT-----IASIINSVQIQILNHFYKKFAVALTDFENHRTTTEYEDSLIFKLFSFTFCNSYGGLIYLAFIGEPIFGLEC----EPSCMTLIATNLTIVFIVELVVGNLTEVLLPCIKFYMSVKAEKGGNGKAFVGRSKRTEAEKGRHLEQYDPIMGTMMDYAELAVQFGYITLFVVAFPLAPFLALISDYVEFRLDGFKLLTQMQRPVPRGAEDIGSWQQVFTAITCIAVITNSALVCLVYNDLVGTYSLSTRLWLFILCQWIAFTF 1692
            SL  +  +  ++D K+  D  EL++ A AG P+  IA I I  DP ++ R  ++ I+AKYD    +Q +Y K G    PF  V R+ +++ I+ +    GG  L++ T+ +K+ +V  +  H E+ +  L KKW+     PW+ PY +IKDY+GEK+GLYF +LGH   WLI   + G    + + +    +  +   F + +  W    LE WKR+   + LEWGM  FE  E  R E+ G  + SP+DGR + Y+ + ++  R   + +    +IL+V++ +AA++  R++     + +   T         I + +N+VQIQ++N  Y   AV L +FENHRT TEYED+LI K F F F NSY  L Y+AFI   I    C    +  C+  +  +L I+F + L  GN  E +LP IK  ++ +  K    +  V R   + AE+  HL  YD  MG   DY E+ +QFGYITLFVV+FPLAPFLAL+++Y E R+D FKL  + +RP P GAEDIG+WQ +   +  I+V+TN A V  V N      S  ++LW FI  + +   F
Sbjct:  107 SLERLCKEADRIDLKLEFDADELKRVAEAGYPDRGIAPIRIKDDPTLTHRKAFDNIFAKYDMEPRLQPVYKKYGHKKIPFRGVDRIKLILSIVGSSTTDGGCHLNVTTLTIKKCLVTAYALHDEEEQASLTKKWINWASLPWQQPYTEIKDYYGEKVGLYFVWLGHYTTWLIGPSVVGIAMLVNIVMEHTPDARLISVFGLFMALWGTVYLESWKRRNSVIKLEWGMDGFEEEEGDRAEFDGVEVESPVDGRPMRYFSAKKKTSRVCASLVFIFVLILMVLAAVAAIFVFRYFARPGKALESFVTISGVNLSVPIGATLNAVQIQVMNGIYGTIAVRLNNFENHRTETEYEDNLIAKTFLFQFVNSYASLFYIAFIKNAIPDNACTDVAKGGCLFDLMFSLGIIFGLRLTSGNFFEAVLPYIKRKLAARFRKPDTSEDGVQRHV-SAAEEQMHLGAYDN-MGIFADYNEMIIQFGYITLFVVSFPLAPFLALLNNYFEIRIDAFKLAKESRRPNPHGAEDIGTWQTILEIMGTISVVTNVAAVVFVSNHTFSGMSFESKLWTFIAVEHVILLF 677          
BLAST of mRNA_H-elongata_contig18535.5007.1 vs. uniprot
Match: A0A485LK58_9STRA (Aste57867_22123 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK58_9STRA)

HSP 1 Score: 370 bits (951), Expect = 1.850e-116
Identity = 218/579 (37.65%), Postives = 321/579 (55.44%), Query Frame = 1
Query:    1 SLFHILAQTQKVDRKMLLDQIELEKAAIAGDPEACIAAITINSDPEISFRTPYEFIYAKYDQAQNIQNLYFKSGGMWHPFHSVVRLSIVIDILKAPMCLGGAGLDLDTMKLKEEIVAFFPKHAEKRKHDLYKKWLVLMQWPWKAPYDQIKDYFGEKIGLYFHFLGHLIAWLIPLGLAGFITALTVYISDNDEHAITLAFAVIVVFWSITMLEFWKRKEKHVALEWGMVDFERGEHTRPEYKGELINSPIDGRKILYYPSNERLWRARKASIVTLSMILIVISCIAAVYTVRWYLLYKTSRDWAETW--------------GDTIASIINSVQIQILNHFYKKFAVALTDFENHRTTTEYEDSLIFKLFSFTFCNSYGGLIYLAFIGEPIFGLECEPS----CMTLIATNLTIVFIVELVVGNLTEVLLPCIKFYMSV---KAEKGGNGKAFVGRSKRTEAEKGRHLEQYDPIMGTMMDYAELAVQFGYITLFVVAFPLAPFLALISDYVEFRLDGFKLLTQMQRPVPRGAEDIGSWQQVFTAITCIAVITNSALVCLVYNDLVGTYSLSTRLWLFILCQ 1674
            SL  +  +  ++D K+  D  EL++ A AG P+  IA I I+ DP+++ R  Y+ I+AKYD    +Q LY K G    PF  V R+ +++ I+ A    GG  L+  T+ +K+ +VA +  H+E+ +  + KKW+     PW+ PY  IKDY+GEK+GLYF +LGH   WLI   + G      + + +  +  +   F   +  W    LE WKR+   + LEWG   FE  E  R E+ GE + SP+DG+ + Y+   ++  R   + +    +IL+V++ +AA++  R++   K     AET+                 I + +N+VQIQI+N  Y   AV L +FENHRT TEYED+LI K F F F NSY  L Y+AFI   I   EC  +    C+  +  +L I+F + L  GN  E +LP IK  ++    K E  G+G A       + AE+  HL  YD   G   DY E+ +QFGY+TLFVV+FPLAPFLAL+++Y E R+D FKL  + +RP P+ AEDIG+WQ +   +  I+V+TN A V  V N      +  T+LW FI+ +
Sbjct:   86 SLERLCKEADRIDLKLEFDADELKRTAEAGYPDRGIAPIRISDDPKLTHRKAYDNIFAKYDMEPRLQPLYKKYGHKKIPFRGVDRIKLILSIIGASASDGGCHLNTTTLIMKKCLVAAYALHSEEEQVAVTKKWINWSSLPWQQPYRAIKDYYGEKVGLYFVWLGHYTTWLIGPSIVGIAMLADIVVENTVDARLISLFGFFMAMWGTVYLESWKRRNSVIKLEWGTEGFEDEEGDRAEFDGEEVESPVDGKPMRYFNPKQQRSRMCASLVFIFVLILMVLAAVAAIFIFRYFA--KDGNSLAETFTIHYGPNKEKHFNFSVVIGATLNAVQIQIMNGIYSTIAVRLNNFENHRTETEYEDNLIAKTFLFQFVNSYASLFYIAFIKSLIPNNECTAAEKGGCIYDLMFSLGIIFCLRLTSGNFFEAILPWIKRKLAARFRKPETTGDGSART----LSAAEEQMHLGTYDNA-GVFADYNEMIIQFGYVTLFVVSFPLAPFLALLNNYFEIRIDAFKLAEESRRPDPKTAEDIGTWQTILEIMGTISVMTNVAAVVFVSNHTFQNATPETKLWAFIVAE 657          
BLAST of mRNA_H-elongata_contig18535.5007.1 vs. uniprot
Match: A0A6U4EFG3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EFG3_9STRA)

HSP 1 Score: 369 bits (946), Expect = 5.220e-115
Identity = 219/579 (37.82%), Postives = 326/579 (56.30%), Query Frame = 1
Query:   34 VDRKMLLDQIELEKAAIAG----DPEACIAAITINSDPEISFRTPYEFIYAKYDQAQNIQNLYFKS-----GGMWHPFHSVVRLSIVIDILKAPMCLGGAGLDLDTMKLKEE--------IVAFFPKHAEKRKHDLYKKWLVLMQWPW-KAPYDQIKDYFGEKIGLYFHFLGHLIAWLIPLGLAGFITALTVYISDNDEHAITLAFAVIVVFWSITMLEFWKRKEKHVALEWGMVDFERGEHTRPEYKGELINSPIDGRKILYYPSNERLWRARKASIVTLSMILIVISCIAAVYTVRWYLLYKTSRDWAETWGDTIASIINSVQIQILNHFYKKFAVALTDFENHRTTTEYEDSLIFKLFSFTFCNSYGGLIYLAFIGEPIFGLECEPSCMTLIATNLTIVFIVELVVGNLTEVLLPCIKFYMSVKA---EKGGNGKAFVGRSKRTEAEKGRHLEQYDPIMGTMMDYAELAVQFGYITLFVVAFPLAPFLALISDYVEFRLDGFKLLTQMQRPVPRGAEDIGSWQQVFTAITCIAVITNSALVCLVYNDLVGT-YSLSTRLWLFILCQWIAFTFMAAL 1704
            +D  + +D +EL+K  ++G    D    +  I IN DP     TP+EFIY  YD  +  + L+ K      GG  HPF   VRL ++ +I      LG    +L+ ++  +         +  +FP H + +  +L  KW+   + PW + P+D IK+YFGE+IGLYF FL H + WL    +AG      V  + N +      F V+V  W I MLEFWKRKE   A++WG   F R    RP ++G  I S IDG  ILYYP NE+  +  ++SI+  + +++V++ + +++  R Y L  +    AE +    AS++N++ IQ+LN+FY   A ALT+ ENHRT  E+E++LIFKLF+F F NSY    Y+AF+ + I G     +CM  +ATN+  +F V L VGN+ EV+LP +  +  VKA   +    G  ++   +    +     E+YD   GTM DY EL VQFG++ LF  A P APF+A IS+Y E+R D  KL+  +QRP+PR AE IGSW  +F  ++ +AV+TN+ L+C  + D+    +++  RLW FI+ Q+  F  M  L
Sbjct:  113 IDMTLEVDPVELKKLTVSGTRGDDGGWRVEPIFINEDPMYCQYTPFEFIYGVYDTDEERKRLFKKKLRSPPGGRDHPFTGCVRLKLMQEIFTNRHLLG---FNLNHIRNNQGQPGEKNPGLKQYFPLHNDHKVRELENKWIKWYKLPWTEEPFDDIKEYFGEQIGLYFVFLNHYLIWLTVPAVAGLGVQFNVLGTMNTQAEGVPPFIVLVSCWCILMLEFWKRKEVDTAMKWGTRGF-RVSRERPGFRGVDIKSYIDGESILYYPPNEKFQKVVRSSIIIFTSVMLVLAVVGSIFAFR-YALLISGNSLAEEYAPVAASVLNAISIQVLNYFYGSLADALTEEENHRTFDEFENALIFKLFAFQFVNSYSSFFYIAFLQQGIEGDCGTATCMDALATNMATIFTVALSVGNVVEVVLPLLSAHYKVKALMDKMESQGVEYISLCEFQAMQ-----EEYDASSGTMDDYLELTVQFGFVVLFAAALPAAPFMAWISNYFEYRFDAIKLIKVLQRPMPRPAETIGSWLVIFQTLSIVAVVTNAGLMCFTFEDIWDIEWTVEGRLWTFIIFQYFVFVCMYVL 681          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18535.5007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW18_9PHAE8.000e-27964.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQE1_ECTSI6.750e-18371.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEZ6_ECTSI6.890e-12640.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5D6Y6A3_9STRA2.510e-11939.93Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3W8D0_GLOUD2.760e-11839.65Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2G4I0_9STRA8.890e-11838.10Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A024UWI9_9STRA2.640e-11737.95Anoct_dimer domain-containing protein n=2 Tax=Apha... [more]
W4H6I1_9STRA6.810e-11737.17Anoct_dimer domain-containing protein n=6 Tax=Apha... [more]
A0A485LK58_9STRA1.850e-11637.65Aste57867_22123 protein n=1 Tax=Aphanomyces stella... [more]
A0A6U4EFG3_9STRA5.220e-11537.82Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18535contigH-elongata_contig18535:859..7226 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score532.7
Seed ortholog evalue2.1e-148
Seed eggNOG ortholog2880.D7FQE1
KEGG koko:K19327,ko:K19480,ko:K19497,ko:K19501
KEGG TC1.A.17.1,1.A.17.1.2,1.A.17.1.21,1.A.17.1.3
KEGG Pathwayko04740,map04740
EggNOG free text desc.intracellular chloride channel activity
EggNOG OGsKOG2514@1,KOG2514@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Hectar predicted targeting categoryother localisation
Exons13
Model size1704
Cds size1704
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930059.9151244-CDS-H-elongata_contig18535:858..10591622930059.9151244-CDS-H-elongata_contig18535:858..1059Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 859..1059 +
1691679265.2930467-CDS-H-elongata_contig18535:858..10591691679265.2930467-CDS-H-elongata_contig18535:858..1059Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 859..1059 +
1622930059.9339912-CDS-H-elongata_contig18535:1678..18441622930059.9339912-CDS-H-elongata_contig18535:1678..1844Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 1679..1844 +
1691679265.3075652-CDS-H-elongata_contig18535:1678..18441691679265.3075652-CDS-H-elongata_contig18535:1678..1844Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 1679..1844 +
1622930059.9529529-CDS-H-elongata_contig18535:2182..22691622930059.9529529-CDS-H-elongata_contig18535:2182..2269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 2183..2269 +
1691679265.317563-CDS-H-elongata_contig18535:2182..22691691679265.317563-CDS-H-elongata_contig18535:2182..2269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 2183..2269 +
1622930059.968131-CDS-H-elongata_contig18535:2744..27991622930059.968131-CDS-H-elongata_contig18535:2744..2799Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 2745..2799 +
1691679265.327943-CDS-H-elongata_contig18535:2744..27991691679265.327943-CDS-H-elongata_contig18535:2744..2799Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 2745..2799 +
1622930059.9830527-CDS-H-elongata_contig18535:3084..32001622930059.9830527-CDS-H-elongata_contig18535:3084..3200Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 3085..3200 +
1691679265.339572-CDS-H-elongata_contig18535:3084..32001691679265.339572-CDS-H-elongata_contig18535:3084..3200Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 3085..3200 +
1622930060.000882-CDS-H-elongata_contig18535:3532..36041622930060.000882-CDS-H-elongata_contig18535:3532..3604Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 3533..3604 +
1691679265.3491666-CDS-H-elongata_contig18535:3532..36041691679265.3491666-CDS-H-elongata_contig18535:3532..3604Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 3533..3604 +
1622930060.0113914-CDS-H-elongata_contig18535:4044..41111622930060.0113914-CDS-H-elongata_contig18535:4044..4111Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 4045..4111 +
1691679265.359363-CDS-H-elongata_contig18535:4044..41111691679265.359363-CDS-H-elongata_contig18535:4044..4111Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 4045..4111 +
1622930060.025734-CDS-H-elongata_contig18535:4428..45361622930060.025734-CDS-H-elongata_contig18535:4428..4536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 4429..4536 +
1691679265.3688593-CDS-H-elongata_contig18535:4428..45361691679265.3688593-CDS-H-elongata_contig18535:4428..4536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 4429..4536 +
1622930060.0446692-CDS-H-elongata_contig18535:4982..51131622930060.0446692-CDS-H-elongata_contig18535:4982..5113Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 4983..5113 +
1691679265.3767421-CDS-H-elongata_contig18535:4982..51131691679265.3767421-CDS-H-elongata_contig18535:4982..5113Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 4983..5113 +
1622930060.058963-CDS-H-elongata_contig18535:5300..55001622930060.058963-CDS-H-elongata_contig18535:5300..5500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 5301..5500 +
1691679265.3843763-CDS-H-elongata_contig18535:5300..55001691679265.3843763-CDS-H-elongata_contig18535:5300..5500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 5301..5500 +
1622930060.0820336-CDS-H-elongata_contig18535:5855..60001622930060.0820336-CDS-H-elongata_contig18535:5855..6000Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 5856..6000 +
1691679265.3917542-CDS-H-elongata_contig18535:5855..60001691679265.3917542-CDS-H-elongata_contig18535:5855..6000Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 5856..6000 +
1622930060.0989494-CDS-H-elongata_contig18535:6246..64971622930060.0989494-CDS-H-elongata_contig18535:6246..6497Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 6247..6497 +
1691679265.3991766-CDS-H-elongata_contig18535:6246..64971691679265.3991766-CDS-H-elongata_contig18535:6246..6497Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 6247..6497 +
1622930060.1149335-CDS-H-elongata_contig18535:7121..72261622930060.1149335-CDS-H-elongata_contig18535:7121..7226Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 7122..7226 +
1691679265.4103966-CDS-H-elongata_contig18535:7121..72261691679265.4103966-CDS-H-elongata_contig18535:7121..7226Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18535 7122..7226 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18535.5007.1prot_H-elongata_contig18535.5007.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18535 859..7226 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18535.5007.1

>prot_H-elongata_contig18535.5007.1 ID=prot_H-elongata_contig18535.5007.1|Name=mRNA_H-elongata_contig18535.5007.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=568bp
SLFHILAQTQKVDRKMLLDQIELEKAAIAGDPEACIAAITINSDPEISFR
TPYEFIYAKYDQAQNIQNLYFKSGGMWHPFHSVVRLSIVIDILKAPMCLG
GAGLDLDTMKLKEEIVAFFPKHAEKRKHDLYKKWLVLMQWPWKAPYDQIK
DYFGEKIGLYFHFLGHLIAWLIPLGLAGFITALTVYISDNDEHAITLAFA
VIVVFWSITMLEFWKRKEKHVALEWGMVDFERGEHTRPEYKGELINSPID
GRKILYYPSNERLWRARKASIVTLSMILIVISCIAAVYTVRWYLLYKTSR
DWAETWGDTIASIINSVQIQILNHFYKKFAVALTDFENHRTTTEYEDSLI
FKLFSFTFCNSYGGLIYLAFIGEPIFGLECEPSCMTLIATNLTIVFIVEL
VVGNLTEVLLPCIKFYMSVKAEKGGNGKAFVGRSKRTEAEKGRHLEQYDP
IMGTMMDYAELAVQFGYITLFVVAFPLAPFLALISDYVEFRLDGFKLLTQ
MQRPVPRGAEDIGSWQQVFTAITCIAVITNSALVCLVYNDLVGTYSLSTR
LWLFILCQWIAFTFMAAL
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mRNA from alignment at H-elongata_contig18535:859..7226+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18535.5007.1 ID=mRNA_H-elongata_contig18535.5007.1|Name=mRNA_H-elongata_contig18535.5007.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6368bp|location=Sequence derived from alignment at H-elongata_contig18535:859..7226+ (Himanthalia elongata Himel1 dioecious)
TCGCTCTTTCATATTCTTGCACAAACACAAAAGGTGGATCGGAAGATGCT TCTAGATCAAATTGAGCTGGAAAAAGCTGCAATTGCTGGAGACCCAGAAG CTTGTATCGCTGCGATCACGATCAACAGTGATCCCGAAATCTCGTTCAGG ACGCCATACGAGTTTATCTATGCTAAATACGACCAAGCACAGAACATTCA GGTGCACTTCACTGATGATTAAATATCGTGCTCCAGAGACATTTTTCTTT TTAAATATATGAACTCATCCAAAAATCTCCGAACATCCACGATTTCTTAG TATCGTGAGAGGTGCAGTCCAGGGGACCAACTGTCGTCAGGTTCGACTAT GGACATTACTACCAGCAGTACTCGTATCTCGAGCATCACTTTTTGTATCT AAAAGTCAAGGCGACCGTCCGTAATTATTTTTGTTTTTATTAAAAAAGCA TATGAACTCATCAAAACCCTCAGAATATCCACCACGCCTTCTTAGCATCA TGAGAGGTGCAGTCCAGGGGACCAACTATCGCCAGGTTCGAATGTAGAGA CTGTTTTTTTAACTCCTCACCGATTAAAGCCTTCAGCAGTAGCAGTGTAT GCCGCTCGGAATTGATCGCCCTCATTACTTACAATCCCACTTAGCTGAAA TCCATCCAACGCTGATAACCAGGTTAGCCCCCACTACGCGCCGGTGGCTA AATAATTATAATACTAGAATATATTTTGCAGCTGCGCCATTGAAAAGTTA AAAATCAATCTGAGCGCAATGAATGATGGTAGCGGTGAAAGCAATTTCCC GTGTCGATTGAAAAAAACAGAATCTCTACTTCAAGAGCGGCGGCATGTGG CACCCCTTCCACTCCGTGGTTCGGCTTAGCATCGTCATCGATATTCTCAA AGCCCCGATGTGCCTCGGCGGCGCTGGACTGGACCTCGACACGATGAAGC TCAAGGAGGAAATCGTCGCCTTCTTCCCCAAACACGGTTGAGACGATGTC CCGTGGCTGTATGTGGCTGATTAATCGATCACTTTGACTGCTGCTGTCGT CGCTGTGGACAGTTGTGGTGAAATATAGACGTCATAACACACCGCAGTGG CTCTCAATATTTGGTTGCTGCTATTCAGAGAAACTACCCAACTCACCTTT ATTTCAAATGCCACCGTTTACCTGTGGGAACTGGACGCAATGGTCAACTT AAAACCGAGCAGCTAGAAGAAAAATGGGAGTGAGGGGGGGGGTGGGGGTT GCTCTGTAGCTCTATGGATCAGCTTAATCGACCCCGGGCATTTTCCCTCG CGTTCCGCACATTCGTATTTTCAGCGGAGAAGAGGAAACATGACCTTTAC AAAAAATGGCTTGTGCTCATGCAGTGGCCATGGAAAGCGCCGTACGATCA GATTAAAGACTGTAAGTGGTAAAAATAAAAAAGAGTCACCACAGAGCCAC GCGCATGGCGAGTCCAATGCGTACAAAGTCACCGATAAGGTGGACAAAGA GGGGCTTTAACTCGCTTTCGCACCATAGAATACTACAATAAATATGTGTA TATCGCGTGGTTGAGTGTTTAACCATCGATTGTGTAAGAGCGAGAGTGGC CTCGTTGTGGGGAAGCTATACATCGTGCGGTACCGGCAGTAACGATTTTA TCTTTGGGCGACATTATTAGGGTTTACTTCAACTAACTGTGGCTAGGTTT CGTTCAGACGCCGTTCTTCTAAACGCCAGAATCTGTTTTGGATAGACTTT GTCTTTCCAAGCGCTAAAAATTGTACTATGTAGTCATGGCCGACAAAATA TCCCACAGACACGAAAAACGTCGATTTCTGCTCATCGAATGTCTTGCGCT CCTCCACGTGTTTGAAACCGCCCTTGGGTAAGACAGACTTCGGCGAAAAG ATTGGCTTGTATTTCCACTTTCTGGGACATTTGATCGCATGGTGAGACGA AGATGCATGTCAAGAGGAACTCGGTAGTACCAGTACGGCGTATCCACATA TATCTTAACGCTTGAAGACCTGAATTAAAGTGGAGAGGGAAGGCTGGAGT AAGATGGTAGATACGGGGAAAGGGGTGAAATGAAAGTCGGATAGGATATT CAGGACTTCTCCCCGAATCTCGCAGGTGTGTATGCTTTCACAGTATTTTT TTAATGATCCCCCTAACAGCAATTTATTTTCCCTTGCCCCTTCGATGCAT TTCAATCATACTGACGATGAGGCAAGGCTGATACCTCTGGGTTTAGCTGG TTTTATCACCGCTCTGACTGTGTATATCTCTGACAACGACGAGCACGCGA TCACCCTGGCGTTTGCCGTCATCGTGGTCTTCTGGTCCATCAGTAAGTGC GGTCAATTGTTTCCCATTAGCCACTGAGCTGTTTTCTTGATTTCCGAATC TTGCTACTGTGAGCGAACCATGCAAATGTAGAGGACGAACGCGATCACGA TGGACTCTCACTCATCCTCACTTATCCAGAAGGAGCTGTAAGCTCTTGTG TCGCTGTCTTACATGGACATTATGACACGATACGTAAGGGCAACATCACA CTCTATTTCGTTGGATAAAGGATCTGATCTACCGGTAGATGCCCGAGTGC GATAATTCACACACGAACATCATTTGCAATACTGTACATATATCGGCTTT CCAAATACATACGAATAATAACAGCAATGCTCGAATTCTGGAAGAGAAAG GAAAAGCACGTGGCTCTCGAATGGGGCATGGTTGACTTCGAAAGGGGTGA GCGCTCCAACGGCATTCACTATGTATAAATGATGATTCCCTTACGTCGAT AACGCGCGTCTCTCCTGTCTCCACAAAATTATGATGATATCGATGGGGCC CGTCTGCCCACCCACCTTCTTTTTATTTTTAGCTGGCAAGGTCGAGAAAA TACCGAAATGCAAATAAACCTTGAGCTGTTTTTTGTTCAAATAATGTTGA ACAAACATAAGAAGAAAAAACACCTAGTCCGAGAAAGGGCTTTGTGGGCA AAACATTAAACTCGTTTGCCACTGGCACCGCATCGCCGGAATGGTATAAT TCCGAGTCATTCCATGCGCGAGAGGGTTGGGATCGGCGTGGCCAGCGCTT GCCATAATTCTCCGCAATATAGCATAGTAATGATCGCGCATTACGTTGCT GCTCCTCATCTACATATATCTGCTGATCACGCGCAGGAGAGCATACCCGA CCAGAATACAAGGGCGAGCTCATCAATAGTCCTATTGACGGTCGCAAGAT TTTGTGAGTACCCCTTTTCCTCCGCTTCGTTCGAGGTTGGCCCTTTTTCC CACGAGCAAGTGGCCAGGCACGCATCAGTAGACTATTATTACAGATCAGC AGGAAATATAGACTATATGGTCTCCCGGAACGAGCTTAAGGATGAGCGAC CGTGCCCGATCTGCCAAATCACCCGCGGAGGGCTTTTGAGTTCCATCCCC AAATAATTCTCCCGGCAAGGCACCTGACAAGCCGTCCATCATTGGATGCA GACTCCGGTTAACATATATCGACGACCTTCAAGTCCGCGCATCCCTCACG CGTACTCTCGTTCGCGGCAGGTACTACCCAAGCAACGAGAGGCTCTGGAG GGCCCGTAAGGCCTCGATAGTGACCTTGTCAATGATATTGATCGTGATCA GCTGCATCGCGGCTGTGTACACTGTCAGGTGTGCGTTTCCGGAGTGCGTT GTGTTCGGAAGAGTAGTGGTGGTGCGCGCGACTCTAGCATGGCAACAACC AATTTGTTCCTCCTTGTATCGTTTCTTGCGATCAGTCGCGTTTAGGCCTC ACCTTTCCACTACGCCAGCAGGAGCCATTGTCCCCGTAGGCCCGTAGGGC TACGCTTCCTACGCCGCTTGGCTTTATATCAGTAGATTCCCGGATGTAAG CTGCGAGGAGTAGCACATTTTATTTTTATTGTGGGACGTTAGAGACGTTA GATCTCGATGCTTGTACTGATTCCCCGATTGTAGTCGACCAATCTTCGTT AAATTTGTATGTAACCACGCATAGTAAGAAAGGCAAAGATTTACTCACGA GTGTGGGGTCTTTGTGACGTACCATTGTTTCATGCTTACGCGCACGCCCT CCACTCCACGCGTTGCGACGACAGGTGGTACCTGTTGTACAAGACGTCGA GAGACTGGGCCGAGACTTGGGGTGATACTATTGCCTCCATTATCAACTCC GTGCAGATCCAGATCCTCAACCACTTTTACAAAAAGTTTGCCGTCGCCCT AACCGGTAAGAACTTAGAATGATGCAGCAGATTCAAAGACACTTGAAGCT GGGGGCAAGAAAAAACGATCCAACGGTATCCAATCCATGGCGCTACTTTT TACACACCGCCCGCGAGTGTATTGCGTCATCGTACTCGTAACCGAATCGA AATACCGTATTTCTGTGCGTATCATTGCACCACCACCTCAAGACTTCGAG AACCATCGCACCACCACGGAGTACGAGGATTCCCTCATCTTCAAGCTCTT CAGCTTCACCTTCTGTAACTCGTACGGTGGTCTTATATATCTGGCCTTCA TCGGCGAGCCCATCTTTGGCCTTGAGTGTGAGCCCAGCTGCATGACCCTT ATCGCCACCAACCTCACCATCGTCTTCATCGTCGAGCTCGTGGTGAGAAA GAGCAATGAAACCAACCTTTCTGGAGAATTTTTTATCTTACCCACATGCC CGCGCTCTCCACTCGCAACTGCCGGGGTTGTTTGAAAAGCAAAAGCAATA TCAAAGCACTGGTGTAATTAGAACTCAACATACGATATTTTTACGCCCTT CAACCAGGAAGTATCATGTCGTCCCTGGATCAAAAATACGTATACCAGTA CAGTGAGAATTAGTTTCTTCTTCTTTGTTAGCTTTTAACCCTGGCCGTAA ATTGAATCATGTTGCGATTGACATTCCTTTAAAAGTGTCACCCGGACTCT GTCACTCGACTCTTGGCCCGCTAAACACGCGGCGGCGGGTACGGTAGGTG GGCAACCTCACTGAAGTCCTGCTTCCGTGTATCAAGTTCTACATGAGTGT GAAAGCTGAAAAAGGCGGAAACGGGAAGGCTTTTGTCGGCAGGAGCAAAC GCACGGAGGCAGAAAAGGGTCGACACCTCGAGCAATACGACCGTAAGAAC GCTATATATCGAGCGTTTCCACATCAATCTCTGTTCCCGCTGCTGCTGCG GCTGCGGCTGCTGCTACGTATACTAAACCGCGGAAATTCAATGACGTCGC AAACGAAGAAGCCTGTTCCTTTCCGATTTCAAAATTGTCATAATGTCGTG GAATATTCTTCCACTCCGCCATGAGCCTTAAGCTGACCCCGTCGTCGCGA CTTTATATAATATCGGTATATATTTATATTTTTTTCAGCAATCATGGGAA CCATGATGGACTACGCCGAGCTCGCTGTGCAGTTTGGGTACATCACCCTC TTCGTGGTCGCCTTTCCGTTAGCCCCATTCCTCGCTCTCATCAGCGACTA CGTGGAGTTCCGCTTGGACGGTTTCAAGCTACTGACCCAAATGCAGCGTC CGGTGCCTCGCGGCGCGGAGGACATCGGCAGCTGGCAGCAGGTCTTCACC GCTATCACATGCATCGCGGTAATTACCAACTCCGCCCTGGTGAGAGTCGC GCGAATTTTCCCGGTGACGCGTCACGCAATTCTGTCGTGGCTGGATAGAG GGCTTGTTTTTCAGGGCGGGATAGGCACGCTGTGCGTGCACAACCACCTT TGGGGTTTGAAGCGGATGTCGACGCCAACGAATGTCGTACTGTAGGTGGG GAAACATTGCCGGTATTTTGAAATGAAATATCCCCTCCTGGATATAAGAT ATCTCACCTGGATTTCTCAGTGGCAGGGCTGTAGCTAACGAGGGAAGACA TACGTTCCCGAAACCTCTGAACGAGATCCCTGCAAACTTCACAAATATCA CCCGCTATCGCCGAAATAAACTAACGCGGAATCCCTTTCCTGACAGGACG TTCTTTCCAGATAGTGCAGTAATCTTGAATGGGTAGCGTCTAGCTCCCCC GCTTTGATCAGCGTACATAGATGTGCGAATTTCGTCGAAGACTTCAGCTC GTCGGGATGGGTATTGTTCGAGGAGCAGATCTACAAACATACTTTTCGTT GTTCACACCCTTTCAGGTATTATGTGGGTAGCCAAACCAGCGAGCGCGAG TTGCATAGATACTGACCGAATCTACGACCCCGCCTCTCCTCGCCACGCCA AATCCTCTTCCAGGTTTGTCTCGTATACAATGACCTTGTGGGAACATATA GCCTGTCCACGCGCCTTTGGCTGTTCATATTATGTCAATGGATCGCCTTC ACCTTCATGGCGGCTCTC
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Coding sequence (CDS) from alignment at H-elongata_contig18535:859..7226+

>mRNA_H-elongata_contig18535.5007.1 ID=mRNA_H-elongata_contig18535.5007.1|Name=mRNA_H-elongata_contig18535.5007.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3408bp|location=Sequence derived from alignment at H-elongata_contig18535:859..7226+ (Himanthalia elongata Himel1 dioecious)
TCGCTCTTTCATATTCTTGCACAAACACAAAAGGTGGATCGGAAGATGCT
TCTAGATCAAATTGAGCTGGAAAAAGCTGCAATTGCTGGAGACCCAGAAG
CTTGTATCGCTGCGATCACGATCAACAGTGATCCCGAAATCTCGTTCAGG
ACGCCATACGAGTTTATCTATGCTAAATACGACCAAGCACAGAACATTCA
GTCGCTCTTTCATATTCTTGCACAAACACAAAAGGTGGATCGGAAGATGC
TTCTAGATCAAATTGAGCTGGAAAAAGCTGCAATTGCTGGAGACCCAGAA
GCTTGTATCGCTGCGATCACGATCAACAGTGATCCCGAAATCTCGTTCAG
GACGCCATACGAGTTTATCTATGCTAAATACGACCAAGCACAGAACATTC
AGAATCTCTACTTCAAGAGCGGCGGCATGTGGCACCCCTTCCACTCCGTG
GTTCGGCTTAGCATCGTCATCGATATTCTCAAAGCCCCGATGTGCCTCGG
CGGCGCTGGACTGGACCTCGACACGATGAAGCTCAAGGAGGAAATCGTCG
CCTTCTTCCCCAAACACGAATCTCTACTTCAAGAGCGGCGGCATGTGGCA
CCCCTTCCACTCCGTGGTTCGGCTTAGCATCGTCATCGATATTCTCAAAG
CCCCGATGTGCCTCGGCGGCGCTGGACTGGACCTCGACACGATGAAGCTC
AAGGAGGAAATCGTCGCCTTCTTCCCCAAACACGCGGAGAAGAGGAAACA
TGACCTTTACAAAAAATGGCTTGTGCTCATGCAGTGGCCATGGAAAGCGC
CGTACGATCAGATTAAAGACTCGGAGAAGAGGAAACATGACCTTTACAAA
AAATGGCTTGTGCTCATGCAGTGGCCATGGAAAGCGCCGTACGATCAGAT
TAAAGACTACTTCGGCGAAAAGATTGGCTTGTATTTCCACTTTCTGGGAC
ATTTGATCGCATGACTTCGGCGAAAAGATTGGCTTGTATTTCCACTTTCT
GGGACATTTGATCGCATGGCTGATACCTCTGGGTTTAGCTGGTTTTATCA
CCGCTCTGACTGTGTATATCTCTGACAACGACGAGCACGCGATCACCCTG
GCGTTTGCCGTCATCGTGGTCTTCTGGTCCATCAGCTGATACCTCTGGGT
TTAGCTGGTTTTATCACCGCTCTGACTGTGTATATCTCTGACAACGACGA
GCACGCGATCACCCTGGCGTTTGCCGTCATCGTGGTCTTCTGGTCCATCA
CAATGCTCGAATTCTGGAAGAGAAAGGAAAAGCACGTGGCTCTCGAATGG
GGCATGGTTGACTTCGAAAGGGCAATGCTCGAATTCTGGAAGAGAAAGGA
AAAGCACGTGGCTCTCGAATGGGGCATGGTTGACTTCGAAAGGGGAGAGC
ATACCCGACCAGAATACAAGGGCGAGCTCATCAATAGTCCTATTGACGGT
CGCAAGATTTTGAGAGCATACCCGACCAGAATACAAGGGCGAGCTCATCA
ATAGTCCTATTGACGGTCGCAAGATTTTGTACTACCCAAGCAACGAGAGG
CTCTGGAGGGCCCGTAAGGCCTCGATAGTGACCTTGTCAATGATATTGAT
CGTGATCAGCTGCATCGCGGCTGTGTACACTGTCAGGTACTACCCAAGCA
ACGAGAGGCTCTGGAGGGCCCGTAAGGCCTCGATAGTGACCTTGTCAATG
ATATTGATCGTGATCAGCTGCATCGCGGCTGTGTACACTGTCAGGTGGTA
CCTGTTGTACAAGACGTCGAGAGACTGGGCCGAGACTTGGGGTGATACTA
TTGCCTCCATTATCAACTCCGTGCAGATCCAGATCCTCAACCACTTTTAC
AAAAAGTTTGCCGTCGCCCTAACCGGTGGTACCTGTTGTACAAGACGTCG
AGAGACTGGGCCGAGACTTGGGGTGATACTATTGCCTCCATTATCAACTC
CGTGCAGATCCAGATCCTCAACCACTTTTACAAAAAGTTTGCCGTCGCCC
TAACCGACTTCGAGAACCATCGCACCACCACGGAGTACGAGGATTCCCTC
ATCTTCAAGCTCTTCAGCTTCACCTTCTGTAACTCGTACGGTGGTCTTAT
ATATCTGGCCTTCATCGGCGAGCCCATCTTTGGCCTTGAGTGTGAGCCCA
GCTGCATGACCCTTATCGCCACCAACCTCACCATCGTCTTCATCGTCGAG
CTCGTGACTTCGAGAACCATCGCACCACCACGGAGTACGAGGATTCCCTC
ATCTTCAAGCTCTTCAGCTTCACCTTCTGTAACTCGTACGGTGGTCTTAT
ATATCTGGCCTTCATCGGCGAGCCCATCTTTGGCCTTGAGTGTGAGCCCA
GCTGCATGACCCTTATCGCCACCAACCTCACCATCGTCTTCATCGTCGAG
CTCGTGGTGGGCAACCTCACTGAAGTCCTGCTTCCGTGTATCAAGTTCTA
CATGAGTGTGAAAGCTGAAAAAGGCGGAAACGGGAAGGCTTTTGTCGGCA
GGAGCAAACGCACGGAGGCAGAAAAGGGTCGACACCTCGAGCAATACGAC
CGTGGGCAACCTCACTGAAGTCCTGCTTCCGTGTATCAAGTTCTACATGA
GTGTGAAAGCTGAAAAAGGCGGAAACGGGAAGGCTTTTGTCGGCAGGAGC
AAACGCACGGAGGCAGAAAAGGGTCGACACCTCGAGCAATACGACCCAAT
CATGGGAACCATGATGGACTACGCCGAGCTCGCTGTGCAGTTTGGGTACA
TCACCCTCTTCGTGGTCGCCTTTCCGTTAGCCCCATTCCTCGCTCTCATC
AGCGACTACGTGGAGTTCCGCTTGGACGGTTTCAAGCTACTGACCCAAAT
GCAGCGTCCGGTGCCTCGCGGCGCGGAGGACATCGGCAGCTGGCAGCAGG
TCTTCACCGCTATCACATGCATCGCGGTAATTACCAACTCCGCCCTGCAA
TCATGGGAACCATGATGGACTACGCCGAGCTCGCTGTGCAGTTTGGGTAC
ATCACCCTCTTCGTGGTCGCCTTTCCGTTAGCCCCATTCCTCGCTCTCAT
CAGCGACTACGTGGAGTTCCGCTTGGACGGTTTCAAGCTACTGACCCAAA
TGCAGCGTCCGGTGCCTCGCGGCGCGGAGGACATCGGCAGCTGGCAGCAG
GTCTTCACCGCTATCACATGCATCGCGGTAATTACCAACTCCGCCCTGGT
TTGTCTCGTATACAATGACCTTGTGGGAACATATAGCCTGTCCACGCGCC
TTTGGCTGTTCATATTATGTCAATGGATCGCCTTCACCTTCATGGCGGCT
CTCGTTTGTCTCGTATACAATGACCTTGTGGGAACATATAGCCTGTCCAC
GCGCCTTTGGCTGTTCATATTATGTCAATGGATCGCCTTCACCTTCATGG
CGGCTCTC
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