mRNA_H-elongata_contig18532.5004.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18532.5004.1 vs. uniprot
Match: D8LQK0_ECTSI (Deoxyribodipyrimidine photo-lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQK0_ECTSI) HSP 1 Score: 650 bits (1678), Expect = 9.930e-225 Identity = 310/420 (73.81%), Postives = 347/420 (82.62%), Query Frame = 1
Query: 1 QTTLRYAAFVLKGLAETEETLRSKRIPFRLLKAAEPGDVVPGLAKELAASAVVTDMSPLRAPRRWVQEVAKELNKAGQNTPLFQVDAHNVVPVWTTSEHREIMARTIRSKIHARPSFFGEFPELGDNPLETGLPKATDWTRAQKSLDLDRSVPEVTWLKPGAKAARSNLETFIDKRLHGFADKSNDPNEDVISHMSPYFNTGQMSAQAAVLRVKTAKHYPDGVKAFVEQGIVRRELSDNFCFYNGEEMRLRATDYNKYDDLSGAADWARETLAIHSNDIRQWTYSLQDLEKARTHDDLWNAAQLQMVNDGKMHNFLRMYWAKKILEWSPAPEDALERCIFLNDKYELDGRDPNGFTGCAWSVMGVHDMGWKEREIFGKIRYMNYGGCMRKFDVQRFVSKYPGAASAAVEAGGTPAPVKRK 1260
+TTLRYA F+LKGL ETE LR K+IPF LL+AAEP DVVP AKEL A A+VTDM PLR P R +EVA+ELNK+G TPLFQVDAHNVVPVW TS+ +E MARTIR KIHARP F G PEL NP T LP ATDW AQ SLDLDRSVPE++WLKPGAK A NL++FI+ R+ GFAD SN+PNEDV SHMSPYFN GQMSAQAAV+RVK ++ +PDGVKAFVEQG+VRRELSDNFCFYN + YD+LSGAA WARE+L H+ND R+WTYS+Q+LE+A+TH+DLWNAAQLQ+V DGKMHNFLRMYWAKKILEWSP+P DALERC+F NDKYELDGRDPNGFTGCAWSVMG+HDMGWKERE+FGKIRYMNY GC RKFDVQ FVSKY GA AAV AGGT AP KRK
Sbjct: 76 KTTLRYAGFMLKGLEETEGDLRKKKIPFHLLQAAEPRDVVPAFAKELGALAIVTDMCPLRDPTRRAREVAEELNKSGDGTPLFQVDAHNVVPVWATSDKQETMARTIRPKIHARPDFLGAIPELSPNPQGTKLPAATDWKAAQTSLDLDRSVPEISWLKPGAKGASDNLQSFIETRMKGFADLSNNPNEDVCSHMSPYFNLGQMSAQAAVMRVKASRRHPDGVKAFVEQGVVRRELSDNFCFYN-----------DNYDNLSGAAGWARESLEAHANDQREWTYSVQELEEAKTHEDLWNAAQLQLVRDGKMHNFLRMYWAKKILEWSPSPHDALERCLFFNDKYELDGRDPNGFTGCAWSVMGIHDMGWKEREVFGKIRYMNYAGCKRKFDVQEFVSKYAGAGEAAVAAGGTVAPAKRK 484
BLAST of mRNA_H-elongata_contig18532.5004.1 vs. uniprot
Match: A0A835Z6D6_9STRA (Deoxyribodipyrimidine photo-lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D6_9STRA) HSP 1 Score: 483 bits (1242), Expect = 7.460e-159 Identity = 233/417 (55.88%), Postives = 292/417 (70.02%), Query Frame = 1
Query: 7 TLRYAAFVLKGLAETEETLRSKRIPFRLLKAAEPGDVVPGLAKELAASAVVTDMSPLRAPRRWVQEVAKELNKAGQNTPLFQVDAHNVVPVWTTSEHREIMARTIRSKIHARPSFFGEFPELGDNPLETGLPKATDWTRAQKSLDLDRSVPEVTWLKPGAKAARSNLETFIDKRLHGFADKSNDPNEDVISHMSPYFNTGQMSAQAAVLRVKTAKHYPDGVKAFVEQGIVRRELSDNFCFYNGEEMRLRATDYNKYDDLSGAADWARETLAIHSNDIRQWTYSLQDLEKARTHDDLWNAAQLQMVNDGKMHNFLRMYWAKKILEWSPAPEDALERCIFLNDKYELDGRDPNGFTGCAWSVMGVHDMGWKEREIFGKIRYMNYGGCMRKFDVQRFVSKYPGAASAAVEAGGTPAPVKR 1257
T+R+ F+L+GL ETE LR+KR+PF LL+ AEP D VP A+ A AVV DMSPLR PR W + VA +L A Q P+FQVDAHN+VPVWT S+ +E ART+R KI + + P L N T LP DW A+++L++DRSV EV PGA A R+ L+ FID RL FA NDPN S +SPY + GQ+S Q AVL V+ +K + K++VE+ +VRRELSDNFCFYN + YD L+ AA+WAR++LA+H++D R+ TY+ DLE RTHDDLWNAAQ+QMV +GKMH FLRMYWAKKILEW+P+P +AL I+LND+YELDGRDPNG+ G AWS+MG+HDMGW ER IFGKIRYMNY GCMRKF+V FV++YP A + AGG PA K+
Sbjct: 107 TIRHFGFMLRGLEETEADLRAKRVPFHLLRGAEPADTVPEFARAQGAVAVVCDMSPLRVPRAWTEGVAAKL--AEQGVPVFQVDAHNIVPVWTVSDKQETGARTLRPKIDRLLTMLTDVPPLAPNAEGTALPPRPDWAAARETLEVDRSVQEVKTFTPGAAAGRAKLQDFIDNRLKLFATGRNDPNVHASSDLSPYLHFGQLSVQRAVLEVRASKKSSESTKSYVEEAVVRRELSDNFCFYNAD-----------YDSLAAAANWARDSLALHASDAREHTYTRDDLEAGRTHDDLWNAAQIQMVQEGKMHGFLRMYWAKKILEWTPSPAEALATAIYLNDRYELDGRDPNGYVGIAWSIMGIHDMGWTERPIFGKIRYMNYAGCMRKFNVASFVARYPAAVANCKAAGGEPAKPKK 510
BLAST of mRNA_H-elongata_contig18532.5004.1 vs. uniprot
Match: A0A7S3XZZ2_HETAK (Deoxyribodipyrimidine photo-lyase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZZ2_HETAK) HSP 1 Score: 459 bits (1180), Expect = 8.720e-149 Identity = 235/436 (53.90%), Postives = 292/436 (66.97%), Query Frame = 1
Query: 10 LRYAAFVLKGLAETEETLRSKRIPFRLLKAAEPGDVVPGLAKELAASAVVTDMSPLRAPRRWVQEVAKELNKAGQ-NTPLFQVDAHNVVPVWTTSEHREIMARTIRSKIHA-RPSFFGEFPELGDNPLETGLPKAT---DWTRAQKSLDLDRSVPEVTWLKPGAKAARSNLETFIDK-RLHGFADKSNDPNEDVISHMSPYFNTGQMSAQAAVLRVKT-AKHYPDGVKAFVEQGIVRRELSDNFCFYNGEEMRLRATDYNKYDDLSGAADWARETLAIHSNDIRQWTYSLQDLEKARTHDDLWNAAQLQMVNDGKMHNFLRMYWAKKILEWSPAPEDALERCIFLNDKYELDGRDPNGFTGCAWSVMGVHDMGWKEREIFGKIRYMNYGGCMRKFDVQRFVSKYPGAASAAVEAGGTPAPVKRKANNKGKGDRSIK 1296
+R+ F+L+G+AE E LR K +PF LL+ P +V+PG A+E A+AVVTDMSPLR P W ++ A L+ G PL QVDAHN+VPVW S +E ARTIRSKIH P F FPEL N G P A DW SL +DR+VPEVTWL+PGA AAR+ L F D RL FAD+ NDPN +S++SPYF+ GQ+SAQAA+L VK + + GV AFVE+ +VRRELSDNFCFY YD L G +DWARE+L +H+ D R+ Y L +L + RTHDDLWNAAQ+QMV +GKMH FLRMYWAKKILEW+P P AL+ +LND++ LDGRDPNG+ G AWS+MG+HDMGWKER IFGKIRYMNY GC RKF++ FV++Y + A+ A T K+ K +G +S K
Sbjct: 90 IRHFGFMLRGMAEVEAELREKNVPFHLLRGWAP-EVLPGFAQEAGAAAVVTDMSPLRVPAGWARDAAAALDGLGAAGPPLHQVDAHNIVPVWVASPKQEYAARTIRSKIHGVLPEFLVPFPELPANTAAAGAPAAPPPEDWDAVIDSLGVDRAVPEVTWLRPGAAAARATLADFCDGGRLKVFADRRNDPNAHALSNLSPYFHYGQLSAQAAILEVKKRSSRHSAGVAAFVEEAVVRRELSDNFCFYQ-----------EHYDSLEGCSDWARESLELHAADPREHLYGLDELAEGRTHDDLWNAAQVQMVTEGKMHGFLRMYWAKKILEWTPDPATALQHANYLNDRFSLDGRDPNGYVGTAWSIMGIHDMGWKERPIFGKIRYMNYAGCKRKFNIPAFVARYSSSMPASTAA--TTMTTKKAVKVKTEGGQSSK 511
BLAST of mRNA_H-elongata_contig18532.5004.1 vs. uniprot
Match: A0A4D9CZD5_9STRA (Deoxyribodipyrimidine photo-lyase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZD5_9STRA) HSP 1 Score: 447 bits (1149), Expect = 1.360e-144 Identity = 230/441 (52.15%), Postives = 285/441 (64.63%), Query Frame = 1
Query: 7 TLRYAAFVLKGLAETEETLRSKRIPFRLLKAAEPGDVVPGLAKELAASAVVTDMSPLRAPRRWVQEVAKELNKAGQNTPLFQVDAHNVVPVWTTSEHREIMARTIRSKIH-ARPSFFGEFPELGDNPLETGL----------PKATDWTRAQKSLDLDRSVPEVTWLKPGAKAARSNLETFIDKRLHGFADKSNDPNEDVISHMSPYFNTGQMSAQAAVLRVKTAKHYPDGVKAFVEQGIVRRELSDNFCFYNGEEMRLRATDYNKYDDLSGAADWARETLAIHSNDIRQWTYSLQDLEKARTHDDLWNAAQLQMVNDGKMHNFLRMYWAKKILEWSPAPEDALERCIFLNDKYELDGRDPNGFTGCAWSVMGVHDMGWKEREIFGKIRYMNYGGCMRKFDVQRFVSKYPGAASAAVEAGGT-------PAPVKRKANNKG 1275
TLR ++L+GL E E L+ K IP LL+ P D+VP L EL ASAV+TD SPLR P Q VA L+ AG+ PLFQVDAHN+VPVW S E+ ARTIR KIH P +F FP G P + P+ + + L LDR V E+ WL+PGA+A NL+TF++K L FA+K NDP E IS+MSPYFN GQ+S QA +L+VK K Y D + AF+E+G+VRRELSDNFCFY E YD L+ AA WA+E+L +H+ND RQ+ Y+ + LE THD LWNA+QLQ+V +GK+H FLRMYWAKKILEW+ P +AL + LND++ LDGRDPNGF G WSVMGVHDMGW ER I GKIRYMNY GC+RKFDV +F ++YP A AA + T P P+K A +G
Sbjct: 105 TLRAYGWMLRGLQEVEAALKRKHIPLYLLQEGPPEDMVPALVCELQASAVITDFSPLRGPLADAQAVAAALDAAGR--PLFQVDAHNIVPVWQASPKLEVGARTIRKKIHDLLPKYFTPFPAEGLAPNDAAAVRALPGRSAPPEGFGYEKVLGRLYLDRGVKEIDWLQPGARAGWENLDTFLEKGLKIFAEKRNDPTEPAISNMSPYFNFGQVSVQAVMLKVKAVKRYHDSIAAFIEEGVVRRELSDNFCFYQPE-----------YDSLAAAAGWAQESLRVHTNDRRQFCYTAEALEAGLTHDQLWNASQLQLVQEGKLHGFLRMYWAKKILEWTATPAEALALALRLNDRFSLDGRDPNGFVGVGWSVMGVHDMGWTERRITGKIRYMNYAGCLRKFDVAKFCARYPAAIEAAQKVQSTIQPNGEGPVPMKAAAGKEG 532
BLAST of mRNA_H-elongata_contig18532.5004.1 vs. uniprot
Match: A9V1G3_MONBE (Deoxyribodipyrimidine photo-lyase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V1G3_MONBE) HSP 1 Score: 448 bits (1152), Expect = 9.670e-141 Identity = 222/414 (53.62%), Postives = 282/414 (68.12%), Query Frame = 1
Query: 1 QTTLRYAAFVLKGLAETEETLRSKRIPFRLLKAAEPGDVVPGLAKELAASAVVTDMSPLRAPRRWVQEVAKELNKAGQNTPLFQVDAHNVVPVWTTSEHREIMARTIRSKIHAR-PSFFGEFPELGDNPLETGLPKATDWTRAQKSLDLDRSVPEVTWLKPGAKAARSNLETFIDKRLHGFADKSNDPNEDVISHMSPYFNTGQMSAQAAVLRVKTAKH--YPDGVKAFVEQGIVRRELSDNFCFYNGEEMRLRATDYNKYDDLSGAADWARETLAIHSNDIRQWTYSLQDLEKARTHDDLWNAAQLQMVNDGKMHNFLRMYWAKKILEWSPAPEDALERCIFLNDKYELDGRDPNGFTGCAWSVMGVHDMGWKEREIFGKIRYMNYGGCMRKFDVQRFVSKYPGAA-SAAVEA 1230
+ T+R F+L GL E LR K IPF LL DV+P A+E A AVV DMSPLR P WV+E +L N PL+QVDAHN+VPVW S +E ARTIR+KIH + + FPEL N LP DW +A++SL+++ V EV WLKPG + LE FI++RLH +AD NDPN D +S++SPY++ GQ+S Q VL +++ + Y +GVKA++E+ +VRRELSDNFCFYN ++YD + GA+ WA+ETL +HS D R+ Y+ + LE A T DDLWNA+QLQ+V +GKMH FLRMYWAKKILEW+ +PE ALE I+LNDKYELDGRDPNG+ GC WS+ G+HD GW ER +FGKIRYMNY GC RKFD+ FV +YP AA +AA EA
Sbjct: 450 EATIRQFGFMLDGLQVVETHLRKKHIPFHLLTGYAK-DVLPKFAEEQEACAVVCDMSPLRVPMAWVKETGSKLKD--MNVPLYQVDAHNIVPVWHASPKQEYAARTIRNKIHQKLDTCLQPFPELESNSNSVQLPDTVDWKKARESLEINWDVKEVDWLKPGYEGGMKMLEEFINERLHRYADDRNDPNLDALSNLSPYYHFGQISVQRVVLELRSKQRGKYAEGVKAYIEEAVVRRELSDNFCFYN-----------HRYDSVEGASAWAQETLDVHSKDKREHLYTRKQLENAETADDLWNASQLQLVQEGKMHGFLRMYWAKKILEWTESPEKALEDAIYLNDKYELDGRDPNGYVGCMWSICGIHDQGWGERPVFGKIRYMNYKGCKRKFDIAAFVKRYPPAAKNAAREA 849
BLAST of mRNA_H-elongata_contig18532.5004.1 vs. uniprot
Match: F2U8C8_SALR5 (Deoxyribodipyrimidine photo-lyase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8C8_SALR5) HSP 1 Score: 435 bits (1118), Expect = 1.900e-140 Identity = 225/452 (49.78%), Postives = 294/452 (65.04%), Query Frame = 1
Query: 7 TLRYAAFVLKGLAETEETLRSKRIPFRLLKAAEPGDVVPGLAKELAASAVVTDMSPLRAPRRWVQEVAKELNKAGQNTPLFQVDAHNVVPVWTTSEHREIMARTIRSKIHAR-PSFFGEFPELGDNPLET----GLPKATDWTRAQKSLDLDRSVPEVTWLKPGAKAARSNLETFIDKRLHGFADKSNDPNEDVISHMSPYFNTGQMSAQAAVLRVKT--AKHYPDGVKAFVEQGIVRRELSDNFCFYNGEEMRLRATDYNKYDDLSGAADWARETLAIHSNDIRQWTYSLQDLEKARTHDDLWNAAQLQMVNDGKMHNFLRMYWAKKILEWSPAPEDALERCIFLNDKYELDGRDPNGFTGCAWSVMGVHDMGWKEREIFGKIRYMNYGGCMRKFDVQRFVSKYPGAASAAVEAGGTPA--PVKRKANNKGK------GDRSIKKFLKTKA 1317
T+R+ F+L+GL +T + L K +PF LL+ + VP A + A+AV+ DMSPLR P RWV++V + L QN PL QVDAHN+VPVW TS+ +E ARTIR KIH ++ FPEL N +T LP D L++D SV EV W++PG + + E F R F + N+PNEDV S++SPYF+ GQ+SA A VL +K+ +K GV+ F+E+ +VRRELSDNFCFYN +YD + GAA WAR+TL H +D R++ Y+ + LE+ +THDDLWNAAQLQMV GKMH FLRMYWAKKILEW+ PEDAL+ +FLND+YELDGRDPNG+ GC WS+ G+HD GW ER +FGKIRYMNY GC RKFDV RFVS++P A + A E G + P ++A+++ K G + K+ KT A
Sbjct: 75 TIRHYGFMLRGLHQTAKHLHEKLVPFHLLQGSA-ATTVPAFAAQHEAAAVICDMSPLRVPLRWVKDVGQALE--AQNVPLLQVDAHNIVPVWVTSQKQEYAARTIRPKIHKHLDTYLQPFPELDANDKDTLGDMELPPVFDLEAQFDMLEVDTSVKEVDWIEPGYEQGMAAAEAFGRDRAKKFDELRNNPNEDVCSNLSPYFHFGQISAAAVVLLLKSKYSKKAAKGVQTFIEEAVVRRELSDNFCFYN-----------RRYDSIDGAAVWARDTLDTHRHDKREYVYTREQLEQGKTHDDLWNAAQLQMVERGKMHGFLRMYWAKKILEWTATPEDALQTALFLNDRYELDGRDPNGYVGCMWSIAGIHDQGWAERAVFGKIRYMNYKGCKRKFDVARFVSRFPQAVANAAEVNGQASSQPTLKQASSRSKRGAGGAGANTAKRAKKTSA 512
BLAST of mRNA_H-elongata_contig18532.5004.1 vs. uniprot
Match: A0A7S2FJK3_9STRA (Deoxyribodipyrimidine photo-lyase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FJK3_9STRA) HSP 1 Score: 434 bits (1116), Expect = 1.810e-138 Identity = 226/445 (50.79%), Postives = 292/445 (65.62%), Query Frame = 1
Query: 7 TLRYAAFVLKGLAETEETLRSKRIPFRLLKAAEPGDVVPGLAKELAASAVVTDMSPLRAPRRWVQEVAKELNKAGQNTPLFQVDAHNVVPVWTTSEHREIMARTIRSKIHAR-PSFFGEFPE-LGDNPLETGLP-----------------KATDWTRAQKSLD-LDRSVPEVTWLKPGAKAARSNLETFIDKRLHGFADKSNDPN-EDVISHMSPYFNTGQMSAQAAVLRVKT-AKHYPDGVKAFVEQGIVRRELSDNFCFYNGEEMRLRATDYNKYDDLSGAADWARETLAIHSNDIRQWTYSLQDLEKARTHDDLWNAAQLQMVNDGKMHNFLRMYWAKKILEWSPAPEDALERCIFLNDKYELDGRDPNGFTGCAWSVMGVHDMGWKEREIFGKIRYMNYGGCMRKFDVQRFVSKYPGAASAAVEAGGTP-APVKRKANNK 1272
TLR+ F+L+GLAET+ L +K +P LL+ +P + AK+ A+ V TDM+PLR P +W +VA++L++ + PL QVDAHN+VPVW TSE +E+ ARTIR K+H P + P L N +E +P ++TDW S++ LD SV V W PGA AA S L F + RL FADK NDP D IS +SP+ + GQ+SAQ AV+ VK + + V ++VE+ +VRRELS+NFC+YN + YD + GAA+WAR +L +H++D R++ Y LE THDDLWNAAQLQ+ GKMH FLRMYWAKKILEW+P+P++AL I+LND+YELDGRDPNG+ GC WS+ GVHDMGWKERE+FGKIR+MNY GC+RKF V FVS+YP AAS AVEAGG P AP K K K
Sbjct: 141 TLRHFDFMLQGLAETDRALDAKGVPLYLLRGEDPAASIAAFAKQEGAAVVFTDMAPLRLPMKWAWDVAQQLDQ--DDIPLVQVDAHNIVPVWVTSEKQEVGARTIRKKVHTHLPRYLANIPPPLAPNDMEF-IPTYQSSRMISEVDDGAKRRSTDWGNVLTSMEGLDTSVGPVGWASPGAAAASSQLRLFCESRLSRFADKRNDPCCLDAISDLSPWLHFGQLSAQRAVIEVKKRGRSHSAAVASYVEEAVVRRELSENFCWYNAQ-----------YDSMDGAAEWARASLELHASDPREYIYDEHALESGCTHDDLWNAAQLQLTETGKMHGFLRMYWAKKILEWTPSPQEALRMAIYLNDRYELDGRDPNGYVGCMWSICGVHDMGWKEREVFGKIRFMNYKGCLRKFPVFEFVSRYPKAASNAVEAGGVPTAPKKGKKRKK 571
BLAST of mRNA_H-elongata_contig18532.5004.1 vs. uniprot
Match: A0A812HK27_9DINO (Deoxyribodipyrimidine photo-lyase n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812HK27_9DINO) HSP 1 Score: 427 bits (1099), Expect = 9.610e-138 Identity = 222/418 (53.11%), Postives = 277/418 (66.27%), Query Frame = 1
Query: 7 TLRYAAFVLKGLAETEETLRSKRIPFRLLKAAEPGDVVPGLAKELAASAVVTDMSPLRAPRRWVQEVAKELNKAGQNTPLFQVDAHNVVPVWTTSEHREIMARTIRSKI-HARPSFFGEFPELGDNP--LETGLPKATDWTRAQKSLDLDRSVPEVTWLKPGAKAARSNLETFIDKRLHGFADKSNDPNEDVISHMSPYFNTGQMSAQAAVLRVKT---AKHYPDGVK----AFVEQGIVRRELSDNFCFYNGEEMRLRATDYNKYDDLSGAADWARETLAIHSNDIRQWTYSLQDLEKARTHDDLWNAAQLQMVNDGKMHNFLRMYWAKKILEWSPAPEDALERCIFLNDKYELDGRDPNGFTGCAWSVMGVHDMGWKEREIFGKIRYMNYGGCMRKFDVQRFVSKYPGAASAAVEA 1230
TLR F+LKGL E L SK+IPF L + + D VP + +L A VV DMSPLR P W ++VA + P+ QVDAHNVVPVW S+ +E ARTIR KI ++ EFP + +P + + + DW A+ SL +D SV V + PGA A + LE F KRL + + N+PNE+ +S +SP+ + GQ+SAQ LRV+ AK G K AF+E+ IVRRELSDNFCFYN +YD L GAA WA++TL H+ D R+ YS ++LE A+THDDLWNAAQLQMV +GKMH FLRMYWAKKILEWSP+P++AL+RCI+LND+YELDGRDPNG+ GC WSV GVHDMGWKERE+FGKIR+MNY GC RKFDV FV+K+PGA EA
Sbjct: 80 TLRQYDFLLKGLREVAADLESKQIPFHL-QLGKAADKVPAVVDQLGAQMVVCDMSPLRVPSEWARDVANLCQ--AKEVPVVQVDAHNVVPVWAASDKQETAARTIRKKIMQPLGTYLTEFPSVDRHPHKFKGEISQPIDWEGAENSLQVDTSVRPVAGIVPGAAAGHAALENFC-KRLSRYDEHRNNPNENALSGLSPWLHFGQISAQRCALRVRRIGEAKSATAGEKKSCEAFIEESIVRRELSDNFCFYNA-----------RYDSLEGAAGWAQQTLKDHAKDKREHLYSREELENAKTHDDLWNAAQLQMVREGKMHGFLRMYWAKKILEWSPSPQEALDRCIWLNDRYELDGRDPNGYVGCMWSVCGVHDMGWKEREVFGKIRFMNYAGCKRKFDVAGFVAKFPGAVPHGAEA 482
BLAST of mRNA_H-elongata_contig18532.5004.1 vs. uniprot
Match: A0A7M4F2Y3_CROPO (Deoxyribodipyrimidine photo-lyase n=4 Tax=Crocodylia TaxID=1294634 RepID=A0A7M4F2Y3_CROPO) HSP 1 Score: 424 bits (1089), Expect = 3.490e-136 Identity = 204/403 (50.62%), Postives = 269/403 (66.75%), Query Frame = 1
Query: 1 QTTLRYAAFVLKGLAETEETLRSKRIPFRLLKAAEPGDVVPGLAKELAASAVVTDMSPLRAPRRWVQEVAKELNKAGQNTPLFQVDAHNVVPVWTTSEHREIMARTIRSKIHAR-PSFFGEFPELGDNPLETGLP-KATDWTRAQKSLDLDRSVPEVTWLKPGAKAARSNLETFIDKRLHGFADKSNDPNEDVISHMSPYFNTGQMSAQAAVLRVKTAK-HYPDGVKAFVEQGIVRRELSDNFCFYNGEEMRLRATDYNKYDDLSGAADWARETLAIHSNDIRQWTYSLQDLEKARTHDDLWNAAQLQMVNDGKMHNFLRMYWAKKILEWSPAPEDALERCIFLNDKYELDGRDPNGFTGCAWSVMGVHDMGWKEREIFGKIRYMNYGGCMRKFDVQRFVSKY 1200
+ T+R+ F+LKGL E E IPF LL+ DV+PG VVTD SPLR P +WV++V + L Q+ PL QVDAHN+VP W S +E ARTIR KIHA+ P F EFP + +P P + DW SL++DR+V EV W PG A + L+ F+ +RL G+++ N+PN+ +S++SP+F+ GQ+S Q AVL V+ ++ + + V +FVE+ ++RREL+DNFCFYN YD L GA DWAR+TL +H+ D R++ Y LQ LE+ +THD LWNAAQ+QMV +GKMH FLRMYWAKKILEW+ +PEDAL I+LND++ELDGRDPNG+ GC WS+ G+HD GW ER +FGKIRYMNY GC RKF+V +F KY
Sbjct: 119 EATIRHFGFLLKGLREVAEECGELGIPFHLLQGYAK-DVLPGFVTRHGIGGVVTDFSPLRVPLQWVEDVKERLP---QDVPLVQVDAHNIVPCWVASSKQEYGARTIRPKIHAQLPEFLTEFPPVVQHPFPAAAPAQPIDWDACYASLEVDRTVSEVKWAAPGTAAGLAVLQAFVTRRLPGYSEYRNNPNKAALSNLSPWFHFGQVSVQRAVLEVRKSRDRHRESVDSFVEEAVIRRELADNFCFYN-----------KSYDQLEGAHDWARDTLRLHARDKREYLYDLQQLEEGKTHDQLWNAAQIQMVREGKMHGFLRMYWAKKILEWTRSPEDALRFAIYLNDRFELDGRDPNGYVGCMWSICGIHDQGWAERNVFGKIRYMNYAGCKRKFNVGQFEHKY 506
BLAST of mRNA_H-elongata_contig18532.5004.1 vs. uniprot
Match: A0A516AGL5_CRYCO (Deoxyribodipyrimidine photo-lyase n=1 Tax=Crypthecodinium cohnii TaxID=2866 RepID=A0A516AGL5_CRYCO) HSP 1 Score: 422 bits (1086), Expect = 5.810e-136 Identity = 213/415 (51.33%), Postives = 270/415 (65.06%), Query Frame = 1
Query: 7 TLRYAAFVLKGLAETEETLRSKRIPFRLLKAAEPGDVVPGLAKELAASAVVTDMSPLRAPRRWVQEVAKELNKAGQNTPLFQVDAHNVVPVWTTSEHREIMARTIRSKI-HARPSFFGEFPELG---DNPLETGLPKATDWTRAQKSLDLDRSVPEVTWLKPGAKAARSNLETFIDKRLHGFADKSNDPNEDVISHMSPYFNTGQMSAQAAVLRVKTA-----KHYPDGVKAFVEQGIVRRELSDNFCFYNGEEMRLRATDYNKYDDLSGAADWARETLAIHSNDIRQWTYSLQDLEKARTHDDLWNAAQLQMVNDGKMHNFLRMYWAKKILEWSPAPEDALERCIFLNDKYELDGRDPNGFTGCAWSVMGVHDMGWKEREIFGKIRYMNYGGCMRKFDVQRFVSKYPGAASAAV 1224
T+R F+L+GL E E+ L SK IPF L K + VP KE ASAVV DM+PLR P +W +V L A N PL QVDAHNVVPVW S+ +E ARTIR KI + P++ +FP L D P + PK DW A+K+L++DR+V V PG + LE F +L FADK NDPN D+ S++SPY + GQ++ Q A L + A K Y G ++F+E+ +VRREL+DNFCFYN KYD + GA+ WA+ETL H +D R+ Y+ Q LE+ ++HDDLWNAAQLQ+V +GKMH FLRMYWAKKILEW P P +AL I LND+YELDGRDPNG+ GC WS+ G+HDMGW ER IFGKIR+MNY GC RKF++ FV +YPGA + +
Sbjct: 81 TIRQFDFMLRGLREVEQDLISKDIPFHL-KMGLASNEVPAFCKEQEASAVVCDMAPLRVPMQWTNDVGNAL--ADLNIPLVQVDAHNVVPVWAASDKQEYAARTIRRKIMDSLPTYLKDFPPLEKHPDPPAKDKWPKPVDWDLAEKTLEVDRTVLPVKQFLPGMFEGKKVLEAFCGSKLSKFADKRNDPNSDISSNLSPYLHFGQLAPQRAALAARKAAEKDKKAYAKGCESFIEELVVRRELADNFCFYNP-----------KYDKIEGASAWAQETLKAHQSDKREHIYTAQQLEEGKSHDDLWNAAQLQLVREGKMHGFLRMYWAKKILEWMPTPAEALAEAIRLNDRYELDGRDPNGYVGCMWSICGIHDMGWTERPIFGKIRFMNYAGCKRKFNIPNFVKRYPGATKSVL 481 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18532.5004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18532.5004.1 >prot_H-elongata_contig18532.5004.1 ID=prot_H-elongata_contig18532.5004.1|Name=mRNA_H-elongata_contig18532.5004.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=385bp MSPLRAPRRWVQEVAKELNKAGQNTPLFQVDAHNVVPVWTTSEHREIMARback to top mRNA from alignment at H-elongata_contig18532:663..5156+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18532.5004.1 ID=mRNA_H-elongata_contig18532.5004.1|Name=mRNA_H-elongata_contig18532.5004.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4494bp|location=Sequence derived from alignment at H-elongata_contig18532:663..5156+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18532:663..5156+ >mRNA_H-elongata_contig18532.5004.1 ID=mRNA_H-elongata_contig18532.5004.1|Name=mRNA_H-elongata_contig18532.5004.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2310bp|location=Sequence derived from alignment at H-elongata_contig18532:663..5156+ (Himanthalia elongata Himel1 dioecious)back to top |