prot_H-elongata_contig1852.5001.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1852.5001.1
Unique Nameprot_H-elongata_contig1852.5001.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length278
Homology
BLAST of mRNA_H-elongata_contig1852.5001.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 6.730e-62
Identity = 119/273 (43.59%), Postives = 169/273 (61.90%), Query Frame = 0
Query:    3 KTNIEYKLRLSVMVGLEGAGHHYLLSSYKNMFKENDTISVDATDCIGMTPYLTERSMVKSPSSYSHDLEQATTEMRRLAEQGKNISGPGHIAALCHFISYPTNFGPQKVMQYLDLGLLAEVAETEGVDLRTIYLRRSAQEIVIADTVHRNFQNQEKRKRDMELPIKPAEQLFVEYMRILLTDIAVVQSMLAELDPAFIVCHDYALAGDKEEASKIAHFVAPNDIVAAMYDSALTKTWK--SHFEPGKAIPIANADVIVARLQRKLDSFEYIYC 273
            KT++    RL  + GLEG GHHY++ +  ++F +N  +         +  Y     M ++   ++     A   MRRLAE   N+S PG +       SYP N GP KVMQY+DLG++AE AE  G+D R +YLRRSA+E+VIA+TVHR F        D E  +   E+LF++YMR+L TDIAV+ S L E+ P F+VCHD+   GDKE+AS IA F++PND +A++ +S+L +T K  S  +P   +P  +A  +V RLQRKLD+FE++YC
Sbjct:  141 KTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDNMNLPRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANLSSPGALEFFSIPCSYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKFHLL---MGDDEETVGQ-ERLFLKYMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPNDEIASLVESSLVQTAKKSSRTDP---LPFEDAYAVVLRLQRKLDAFEHLYC 406          
BLAST of mRNA_H-elongata_contig1852.5001.1 vs. uniprot
Match: D7FZI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI1_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 8.460e-31
Identity = 57/103 (55.34%), Postives = 78/103 (75.73%), Query Frame = 0
Query:  171 EQLFVEYMRILLTDIAVVQSMLAELDPAFIVCHDYALAGDKEEASKIAHFVAPNDIVAAMYDSALTKTWKSHFEPGKAIPIANADVIVARLQRKLDSFEYIYC 273
            E+LF+EYMR+L TDIAV+QS L+E+ P FIVCHD+   GDKE+AS IAHF+APND +A + +S+L +T +        +P  +AD +V+RLQRKLD+FE +YC
Sbjct:   11 ERLFLEYMRVLFTDIAVLQSFLSEIGPEFIVCHDWDRLGDKEQASTIAHFIAPNDEIAGLVESSLVQTARKKSSNTNPLPFEDADAVVSRLQRKLDAFEPLYC 113          
BLAST of mRNA_H-elongata_contig1852.5001.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 7.630e-26
Identity = 77/237 (32.49%), Postives = 119/237 (50.21%), Query Frame = 0
Query:    1 VRKTNIEYKLRLSVMVGLEGAGHHYLLSSYKNMFKENDTISVDATDCIGMTPYLTERSMVKSPSSYSHDLEQATTEMRRLAEQGKNISGPGHIAAL----CHF-----ISYPTNFGPQKVMQYLDLGLLAEVAETEGVDLRTIYLRRSAQEIVIADTVHRNFQNQEKRKRDMELPIKPAEQLFVEYMRILLTDIAVVQSMLAELDPAFIVCHDYALAGDKEEASKIAHFVAPNDIVA 228
            V K  +  ++R+  +VGLEG GHHY+    +++ K+ D +      C+       E S+ KS ++Y    ++   EM +LA   +     G    +    C F     +SYP   G +K +QY+D  L+AE AE  GVD+R +YL RSA +I+ +D+ H N+                    F+   RILL ++AVV S   ELDP+F  C  Y    D  +A+++A F+APN+  A
Sbjct:   99 VEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKK-DKVRCPKL-CVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNYGGS-----------------FIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPNNHTA 316          
BLAST of mRNA_H-elongata_contig1852.5001.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 3.510e-25
Identity = 84/263 (31.94%), Postives = 120/263 (45.63%), Query Frame = 0
Query:    1 VRKTNIEYKLRLSVMVGLEGAGHHYLLSSYKNMFKENDTISVDATDCIGMTPYLTERSMVKSPSSYSHDLEQATTEMRR----LAEQGKNISGPGHIAALCHFI---------SYPTNFGPQKVMQYLDLGLLAEVAETEGVDLRTIYLRRSAQEIVIADTVHRNFQNQEKRKRDMELPIKPAEQLFVEYMRILLTDIAVVQSMLAELDPAFIVCHDYALAGDKEEASKIAHFVAPNDIVAAMYDSALTKTWKSHFEPGKAIP 250
            V K  +  +LR+  +VGLEG GHHY L    N+F  +D  +  A  C    P         +  S   D E+A  E+RR    LA         G  AA+  F+         S+P   G  K +QY+D  LLAE AE  GVD+R +YL RSA+ I+++DT H ++                    F+   R L+ + AVV+S   EL P F  C  Y    D E+  ++A F+AP++  A   +  + +  K    PG A P
Sbjct:   58 VEKKTVSSQLRVMFLVGLEGTGHHYFL----NVF--DDACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQ-AAIAQFVTCRSKSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYGG-----------------TFMRESRALINNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPDEDTAQRLEGKMLENVK----PGSASP 292          
BLAST of mRNA_H-elongata_contig1852.5001.1 vs. uniprot
Match: D7G1E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 2.350e-22
Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 0
Query:   59 MVKSPSSYSHDLEQATTEMRRLAEQGKNISGPGHIAALCHFISYPTNFGPQKVMQYLDLGLLAEVAETEGVDLRTIYLRRSAQEIVIADTVHRNFQN 155
            M  S ++++   +Q   +MR LA++ + +  PG +  +   ISYP   GPQKV QY+DL LLAE AE EGVDLR +Y++RSA+E+++ADTVHR FQN
Sbjct:   27 MRTSSTAFTASWQQGRDQMRDLAQRAQTLPTPGTVQLITGGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGFQN 123          
BLAST of mRNA_H-elongata_contig1852.5001.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.570e-20
Identity = 78/258 (30.23%), Postives = 118/258 (45.74%), Query Frame = 0
Query:   47 CIGMTPYLTERSMVKSPSSYSHDLEQATTEMRRLAEQGKNISGPGHIAAL----CHF-----ISYPTNFGPQKVMQYLDLGLLAEVAETEGVDLRTIYLRRSAQEIVIADTVHRNFQNQEKRKRDMELPIKPAEQLFVEYMRILLTDIAVVQSMLAELDPAFIVCHDYALAGDKEEASKIAHFVAPNDIVAAMY--------------DSALTKTW----KSHFEPGKAIPIANADVIVARLQRKLDSFEYIYCPSRS 277
            C+       E S+ +S ++Y    ++   EM +LA   +     G    +    C F     +SYP   G +K +QY+D  L+AE AE  GVD+R +YL RSA +I+ +D+VH N+                    F+   RILL ++AVV S   ELDPAF  C  Y    D  +A+++A F+APN+  A                 +S   ++W    K    P    P   A  +V RLQ++LD  E   C +++
Sbjct:   20 CVMAKVLYPELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNYGGS-----------------FIRESRILLNNLAVVHSTFQELDPAFTTCFRYGEMADPAQAARVAGFLAPNNRTAEKLADQMLSHVKIKSPPESGNKQSWGEGGKRLRHPEDVDPPKAA--VVTRLQQRLDMVEKDVCSTKN 258          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1852.5001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JH94_9PHAE6.730e-6243.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZI1_ECTSI8.460e-3155.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMV4_ECTSI7.630e-2632.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMV3_ECTSI3.510e-2531.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1E6_ECTSI2.350e-2249.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIA1_9PHAE1.570e-2030.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1852contigH-elongata_contig1852:10565..11852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1852.5001.1mRNA_H-elongata_contig1852.5001.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1852 10565..11852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1852.5001.1 ID=prot_H-elongata_contig1852.5001.1|Name=mRNA_H-elongata_contig1852.5001.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=278bp
VRKTNIEYKLRLSVMVGLEGAGHHYLLSSYKNMFKENDTISVDATDCIGM
TPYLTERSMVKSPSSYSHDLEQATTEMRRLAEQGKNISGPGHIAALCHFI
SYPTNFGPQKVMQYLDLGLLAEVAETEGVDLRTIYLRRSAQEIVIADTVH
RNFQNQEKRKRDMELPIKPAEQLFVEYMRILLTDIAVVQSMLAELDPAFI
VCHDYALAGDKEEASKIAHFVAPNDIVAAMYDSALTKTWKSHFEPGKAIP
IANADVIVARLQRKLDSFEYIYCPSRS*
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