prot_H-elongata_contig99938.17306.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99938.17306.1
Unique Nameprot_H-elongata_contig99938.17306.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length166
Homology
BLAST of mRNA_H-elongata_contig99938.17306.1 vs. uniprot
Match: A0A6H5L2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 6.100e-42
Identity = 77/123 (62.60%), Postives = 87/123 (70.73%), Query Frame = 0
Query:   34 GGHILKDKAMQVSTVCGFCGGLGCHTTINAPSGKAAPVIHSTCPYAPRKDARDAAVQLSLKSAREGSDTSPCTNIVMKCIFCFQETYIWKYDMADHVARCHNEDTLVEAGTESAKKFKKDIIL 156
            GGHILKDK   VST CGFCGG+G  TTI+ P GKA P++HSTCP APR DAR  AV L+L SAR GSDTS CTN+V KC FC Q  YIWKY M+DH+ RCH  D LV  GT  A  FK+   +
Sbjct:  403 GGHILKDK---VSTACGFCGGVGRPTTIHDPPGKARPLVHSTCPSAPRSDARQEAVALNLSSARAGSDTSLCTNMVFKCFFCSQYNYIWKYSMSDHITRCHQADVLVAEGT-GADNFKETCTI 521          
BLAST of mRNA_H-elongata_contig99938.17306.1 vs. uniprot
Match: A0A6H5K6M3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M3_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 5.590e-39
Identity = 73/125 (58.40%), Postives = 87/125 (69.60%), Query Frame = 0
Query:   32 HVGGHILKDKAMQVSTVCGFCGGLGCHTTINAPSGKAAPVIHSTCPYAPRKDARDAAVQLSLKSAREGSDTSPCTNIVMKCIFCFQETYIWKYDMADHVARCHNEDTLVEAGTESAKKFKKDIIL 156
            HVGG    +K   VSTVCGFCGG+GC +TI+ P G+A P++HSTCP APR DAR  AV L+L SAR  SDTSPCTN+V+KC  C Q+ YIW Y M DHV RCH  + LV  GT  A KFK+   +
Sbjct: 1076 HVGGDP-GNKTSPVSTVCGFCGGVGCRSTIHDPPGEARPLVHSTCPSAPRSDARQEAVALNLSSARADSDTSPCTNMVLKCFLCSQDNYIWNYGMFDHVTRCHQANVLVAVGT-GADKFKEACTI 1198          
BLAST of mRNA_H-elongata_contig99938.17306.1 vs. uniprot
Match: D7FNW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW9_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 5.470e-10
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 0
Query:  108 IVMKCIFCFQETYIWKYDMADHVARCHNEDTLVEAGTESAKKFKKDIIL 156
            +V+KC+FC Q+TYIWKY M++HV RCH ED LV AGT +  +FK+   +
Sbjct:    1 MVLKCLFCSQDTYIWKYGMSEHVTRCHREDILVAAGT-TVDRFKEAYTI 48          
BLAST of mRNA_H-elongata_contig99938.17306.1 vs. uniprot
Match: B0DV83_LACBS (Predicted protein n=1 Tax=Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) TaxID=486041 RepID=B0DV83_LACBS)

HSP 1 Score: 58.5 bits (140), Expect = 6.860e-8
Identity = 43/116 (37.07%), Postives = 57/116 (49.14%), Query Frame = 0
Query:   10 ASAENVPGKLCDQRLPRSKIRMHVGGHILKD---------KAMQVSTVCGFCG-GLGCHTTINAPSGKAAPVIHSTCPYAPRKDARDAAVQLSLKSAREGSDTSPCTNIVMKCIFC 115
            + A +V  +LC ++   SK+R+HVG HIL           K+M  S  CGFCG   GC T +       A VI STCP+   K        +  K+A E +  SPCTNI + C  C
Sbjct:   28 SGATDVNCELCGEKTTISKMRVHVGKHILYSMRRRPDVELKSMGASP-CGFCGLDSGCQTQLTFKKNGVA-VIKSTCPFHYEK--------MQYKAALEPTKASPCTNIPIHCRLC 133          
BLAST of mRNA_H-elongata_contig99938.17306.1 vs. uniprot
Match: A0A4S4MVC7_9APHY (Uncharacterized protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4MVC7_9APHY)

HSP 1 Score: 52.8 bits (125), Expect = 6.020e-5
Identity = 39/136 (28.68%), Postives = 62/136 (45.59%), Query Frame = 0
Query:   13 ENVPGKLCDQRLPRSKIRMHVGGHIL------KDKAMQVST-VCGFCGGLGCHTT-INAPSGKAAPVIHSTCPYAPRKDARDAAVQLSLKSAREGSDTSPCTNIVMKCIFCFQETY-----IWKYDMADHVARCHN 135
            + +  +LC+   P S++R HVG HIL      +D  + +    CGFCG  GC    I++  G    ++ S C Y           Q+    A   S+ +PCTN+ + C+ C +        IWKY+   H+   H+
Sbjct:  770 DEIQCQLCEVNTPLSRMRNHVGIHILHALRGIEDDGIVIGVDPCGFCGLEGCVVQMIDSDDGNTHRIL-SNCEYH--------YTQMKYGPASRFSNATPCTNVPIHCLSCERTASGLPRTIWKYNALYHITLDHS 896          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99938.17306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L2E6_9PHAE6.100e-4262.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6M3_9PHAE5.590e-3958.40Reverse transcriptase Ty1/copia-type domain-contai... [more]
D7FNW9_ECTSI5.470e-1055.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B0DV83_LACBS6.860e-837.07Predicted protein n=1 Tax=Laccaria bicolor (strain... [more]
A0A4S4MVC7_9APHY6.020e-528.68Uncharacterized protein n=1 Tax=Antrodiella citrin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99938contigH-elongata_contig99938:830..1490 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99938.17306.1mRNA_H-elongata_contig99938.17306.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99938 376..1511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99938.17306.1 ID=prot_H-elongata_contig99938.17306.1|Name=mRNA_H-elongata_contig99938.17306.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp
MVGVAPAEGASAENVPGKLCDQRLPRSKIRMHVGGHILKDKAMQVSTVCG
FCGGLGCHTTINAPSGKAAPVIHSTCPYAPRKDARDAAVQLSLKSAREGS
DTSPCTNIVMKCIFCFQETYIWKYDMADHVARCHNEDTLVEAGTESAKKF
KKDIILCRRWRRARC*
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