prot_H-elongata_contig99728.17297.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99728.17297.1
Unique Nameprot_H-elongata_contig99728.17297.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
BLAST of mRNA_H-elongata_contig99728.17297.1 vs. uniprot
Match: D7FN17_ECTSI (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN17_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 2.380e-48
Identity = 79/106 (74.53%), Postives = 90/106 (84.91%), Query Frame = 0
Query:   17 QVLHALVGVVRSPWGTTLMQVVSRLVGVWGFLWAVPGTQAQLGATLCIASWSAVEVPSRYLFYAFSVLGSCPYPLFYLRYSLFFVLYPSGILGEVMTMLAALPDLK 122
            +VLHA++GVVRSPW TTLMQV SR++ VWGF+WAVP TQ QLG+ LCI SW+ VE+P RYLFY F VL S P+PLFYLRYSLF VLYP+GI GEVMTMLA LPDLK
Sbjct:   59 EVLHAMLGVVRSPWVTTLMQVSSRIILVWGFMWAVPSTQGQLGSMLCITSWACVEIP-RYLFYTFGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLK 163          
BLAST of mRNA_H-elongata_contig99728.17297.1 vs. uniprot
Match: A0A835ZGJ3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGJ3_9STRA)

HSP 1 Score: 123 bits (309), Expect = 7.690e-33
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 0
Query:   17 QVLHALVGVVRSPWGTTLMQVVSRLVGVWGFLWAVPGTQAQLGATLCIASWSAVEVPSRYLFYAFSVLGSCPYPLFYLRYSLFFVLYPSGILGEVMTMLAALPDLK 122
            ++LH+LVG+V SPW TTL+QV SRLV  WGFL++   +Q      L   SW+ VEVP RYLFY F+++G+ PYPLF+LRYSLF VLYPSGI GE+MT++     LK
Sbjct:   57 EILHSLVGLVPSPWMTTLLQVSSRLVVAWGFLYSCEASQDHYAMALTTVSWALVEVP-RYLFYVFNIMGNVPYPLFWLRYSLFAVLYPSGITGEIMTIVNGFDCLK 161          
BLAST of mRNA_H-elongata_contig99728.17297.1 vs. uniprot
Match: A0A1Z5KVW7_ORNMO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=2 Tax=Ornithodoros TaxID=6937 RepID=A0A1Z5KVW7_ORNMO)

HSP 1 Score: 110 bits (275), Expect = 1.220e-27
Identity = 54/106 (50.94%), Postives = 75/106 (70.75%), Query Frame = 0
Query:   17 QVLHALVGVVRSPWGTTLMQVVSRLVGVWGFLWAVPGTQAQLGATLCIASWSAVEVPSRYLFYAFSVLGSCPYPLFYLRYSLFFVLYPSGILGEVMTMLAALPDLK 122
            +V+H LVG+V S W  TL+Q++SRL+ VWG L  VP +Q Q G  + + +W   E+ +RY FYA S+  SCPY L + RYS F VLYP+G+ GE++TM+AALP +K
Sbjct:   64 EVVHCLVGLVASNWFLTLIQILSRLMVVWGILVPVPESQNQYGIVMLLVAWCIAEI-TRYSFYALSLYHSCPYALTWCRYSFFLVLYPTGVSGEIITMVAALPYIK 168          
BLAST of mRNA_H-elongata_contig99728.17297.1 vs. uniprot
Match: A0A147B7T9_9ACAR (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Carios mimon TaxID=360319 RepID=A0A147B7T9_9ACAR)

HSP 1 Score: 108 bits (270), Expect = 1.350e-27
Identity = 54/120 (45.00%), Postives = 78/120 (65.00%), Query Frame = 0
Query:    3 VAPPTVARVYLVSDQVLHALVGVVRSPWGTTLMQVVSRLVGVWGFLWAVPGTQAQLGATLCIASWSAVEVPSRYLFYAFSVLGSCPYPLFYLRYSLFFVLYPSGILGEVMTMLAALPDLK 122
            VA PT     L   +V+H L+G+V S W  TL+Q++SRL+ VWG L  VP +Q Q G  + + +W   E+ +RY FY  ++  +CPY L + RYS F VLYP+G+ GE++TM+ ALP +K
Sbjct:    2 VAQPTQLFQSLALLEVVHCLIGIVASNWFLTLIQILSRLMVVWGILVPVPESQGQYGIVMLLVAWCIAEI-TRYSFYGLTLYNACPYGLTWCRYSFFLVLYPTGVSGEIITMVTALPYIK 120          
BLAST of mRNA_H-elongata_contig99728.17297.1 vs. uniprot
Match: A0A2R5LGP7_9ACAR (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LGP7_9ACAR)

HSP 1 Score: 107 bits (268), Expect = 1.270e-26
Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 0
Query:   17 QVLHALVGVVRSPWGTTLMQVVSRLVGVWGFLWAVPGTQAQLGATLCIASWSAVEVPSRYLFYAFSVLGSCPYPLFYLRYSLFFVLYPSGILGEVMTMLAALPDLKVQ 124
            +V+H L+G+V S W  TL+Q++SRL+ VWG L  VP +Q Q G  + + +W   E+ +RY FY  ++  +CPY L + RYS F VLYP+G+ GE++TM+AALP +K +
Sbjct:   61 EVVHCLIGIVASNWFLTLIQILSRLMVVWGILVPVPESQNQYGIVMLLVAWCIAEI-TRYSFYGLTLYNACPYGLTWCRYSFFLVLYPTGVSGEIITMVAALPYIKAR 167          
BLAST of mRNA_H-elongata_contig99728.17297.1 vs. uniprot
Match: A0A812IIB8_9DINO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812IIB8_9DINO)

HSP 1 Score: 106 bits (265), Expect = 4.400e-26
Identity = 58/110 (52.73%), Postives = 76/110 (69.09%), Query Frame = 0
Query:   13 LVSDQVLHALVGVVRSPWGTTLMQVVSRLVGVWGFLWAVPGTQAQLGATLCIASWSAVEVPSRYLFYAFSVLGSCPYPLFYLRYSLFFVLYPSGILGEVMTMLAALPDLK 122
            L + +VLHA+VG+VR+   TT +QV+SRL+ +WG     P  Q     TL  ASWSAVEVP RYLF   ++  + PYPL +LRYSLF VLYP+GI GEV ++ +ALP +K
Sbjct:   62 LAAMEVLHAMVGLVRASPATTALQVLSRLIVLWGVTHFAPAAQTGPCFTLMAASWSAVEVP-RYLFLLLNLWNAVPYPLLWLRYSLFMVLYPTGISGEVWSIWSALPFIK 170          
BLAST of mRNA_H-elongata_contig99728.17297.1 vs. uniprot
Match: A0A024TZ79_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZ79_9STRA)

HSP 1 Score: 106 bits (264), Expect = 5.410e-26
Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = 0
Query:   17 QVLHALVGVVRSPWGTTLMQVVSRLVGVWGFLWAVPGTQAQLGATLCIASWSAVEVPSRYLFYAFSVLGSCPYPLFYLRYSLFFVLYPSGILGEVMTMLAALPDLK 122
            +VLHA++G+VRSP G+TLMQV SRL  VW      P ++   G  L +ASWS VEVP RY FYA ++L + P  LF+LRY LF VLYPSG+ GEV  M+ ALP L 
Sbjct:   62 EVLHAMLGLVRSPVGSTLMQVSSRLFLVWAINVLCPDSRYHWGFILMVASWSLVEVP-RYAFYALNLLEAVPDWLFFLRYHLFMVLYPSGVTGEVTCMVKALPFLS 166          
BLAST of mRNA_H-elongata_contig99728.17297.1 vs. uniprot
Match: A0A482RN91_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RN91_9ARCH)

HSP 1 Score: 105 bits (261), Expect = 6.710e-26
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 0
Query:   17 QVLHALVGVVRSPWGTTLMQVVSRLVGVWGFLWAVPGTQAQLGATLCIASWSAVEVPSRYLFYAFSVLGSCPYPLFYLRYSLFFVLYPSGILGEVMTMLAALPDL 121
            +VL+AL G+VRSPW T LMQV SR+  +W  +   P  Q  L   L   SW+ VEVP RYLFYA S+  + PYPLF+LRYSLF +LYP+GI GE+  M  +L +L
Sbjct:   31 EVLNALFGIVRSPWVTVLMQVFSRVWTLWAVMDMAPTAQHSLFFLLACTSWALVEVP-RYLFYALSIANAVPYPLFWLRYSLFAILYPTGITGELGCMYLSLFEL 134          
BLAST of mRNA_H-elongata_contig99728.17297.1 vs. uniprot
Match: A0A067CBA8_SAPPC (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBA8_SAPPC)

HSP 1 Score: 104 bits (260), Expect = 2.040e-25
Identity = 58/106 (54.72%), Postives = 71/106 (66.98%), Query Frame = 0
Query:   17 QVLHALVGVVRSPWGTTLMQVVSRLVGVWGFLWAVPGTQAQLGATLCIASWSAVEVPSRYLFYAFSVLGSCPYPLFYLRYSLFFVLYPSGILGEVMTMLAALPDLK 122
            +V+HAL+G+VRSP G+T MQV SRL  VW      P ++   G  L +ASW  VEVP RY FYA ++L + P  LF+LRY LF VLYPSG+ GEV  ML ALP L 
Sbjct:   60 EVVHALIGLVRSPVGSTFMQVSSRLWLVWAINVLCPESRTHWGFVLMVASWGLVEVP-RYAFYALNLLDAVPDWLFFLRYHLFMVLYPSGVTGEVTCMLKALPLLS 164          
BLAST of mRNA_H-elongata_contig99728.17297.1 vs. uniprot
Match: A0A485KQR1_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQR1_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.040e-25
Identity = 58/103 (56.31%), Postives = 71/103 (68.93%), Query Frame = 0
Query:   17 QVLHALVGVVRSPWGTTLMQVVSRLVGVWGFLWAVPGTQAQLGATLCIASWSAVEVPSRYLFYAFSVLGSCPYPLFYLRYSLFFVLYPSGILGEVMTMLAALP 119
            +VLHA++G+VRSP G+T MQV SRL  +W      P ++   G  L +ASWS VEVP RY FYA ++L + P  LF+LRY LF VLYPSGI GEV  ML ALP
Sbjct:   60 EVLHAMLGLVRSPVGSTFMQVSSRLFLLWAINVLCPDSRYHWGFILMVASWSLVEVP-RYAFYALNLLDAVPDWLFFLRYHLFMVLYPSGITGEVTCMLKALP 161          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99728.17297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN17_ECTSI2.380e-4874.53Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A835ZGJ3_9STRA7.690e-3357.55Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A1Z5KVW7_ORNMO1.220e-2750.94Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A147B7T9_9ACAR1.350e-2745.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A2R5LGP7_9ACAR1.270e-2646.30Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A812IIB8_9DINO4.400e-2652.73Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A024TZ79_9STRA5.410e-2655.66Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A482RN91_9ARCH6.710e-2653.33Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A067CBA8_SAPPC2.040e-2554.72Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A485KQR1_9STRA2.040e-2556.31Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007482Protein-tyrosine phosphatase-like, PTPLAPFAMPF04387PTPLAcoord: 18..122
e-value: 2.4E-34
score: 118.4
IPR007482Protein-tyrosine phosphatase-like, PTPLAPANTHERPTHR11035PTPLA DOMAIN PROTEINcoord: 17..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..99
NoneNo IPR availableTMHMMTMhelixcoord: 96..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99728contigH-elongata_contig99728:287..1308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99728.17297.1mRNA_H-elongata_contig99728.17297.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99728 287..1308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99728.17297.1 ID=prot_H-elongata_contig99728.17297.1|Name=mRNA_H-elongata_contig99728.17297.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
VVVAPPTVARVYLVSDQVLHALVGVVRSPWGTTLMQVVSRLVGVWGFLWA
VPGTQAQLGATLCIASWSAVEVPSRYLFYAFSVLGSCPYPLFYLRYSLFF
VLYPSGILGEVMTMLAALPDLKVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007482Tyr_Pase-like_PTPLA