prot_H-elongata_contig9967.17292.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9967.17292.1
Unique Nameprot_H-elongata_contig9967.17292.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length153
Homology
BLAST of mRNA_H-elongata_contig9967.17292.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 2.210e-57
Identity = 92/152 (60.53%), Postives = 119/152 (78.29%), Query Frame = 0
Query:    1 MFEEMQQGRRKLV-HESFEDWILRFDH-MAAPDWCAKYISERGLDHVQSNHAIFRIVTPTVVVRLLAGINNQQGGNLNWDGRVLPEIDFWQMEVGFEGLVLEHTKLTGLLGETARPVFDDQGHALMRGHDALRGTVEDYRVTDATAIDFALL 150
            M+++M +GRR+L   ES E+WIL++DH MAAP WCAKYI+E  L  +QS+HAIF+I TPTV VRL AG+N Q  G LNWDGRVLP+++FWQM VG +GL +++  L+GLLGETARPV+D+ G  +M G DA RGT+EDYRV+DA  + F LL
Sbjct:  254 MYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHFPLL 405          
BLAST of mRNA_H-elongata_contig9967.17292.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 9.960e-56
Identity = 91/143 (63.64%), Postives = 111/143 (77.62%), Query Frame = 0
Query:    8 GRRKLVHESFEDWILRFDHMAAPDWCAKYISERGLDHVQSNHAIFRIVTPTVVVRLLAGINNQQGGNLNWDGRVLPEIDFWQMEVGFEGLVLEHTKLTGLLGETARPVFDDQGHALMRGHDALRGTVEDYRVTDATAIDFALL 150
             RRKL  +SFEDW+L F  MAA DWC +YISE+GL  VQS+HAI++IVTP VVVRL  GI +Q G  ++WDGRVLP++D WQM+VG  GL LE+  LTG+LGETARPV+D+ GHA+M G DA RGT EDYRV+    +DFALL
Sbjct:  551 ARRKLRAQSFEDWVLSFTDMAAHDWCTEYISEKGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFALL 693          
BLAST of mRNA_H-elongata_contig9967.17292.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.390e-54
Identity = 89/152 (58.55%), Postives = 117/152 (76.97%), Query Frame = 0
Query:    1 MFEEMQQGRRKLVH-ESFEDWILRFD-HMAAPDWCAKYISERGLDHVQSNHAIFRIVTPTVVVRLLAGINNQQGGNLNWDGRVLPEIDFWQMEVGFEGLVLEHTKLTGLLGETARPVFDDQGHALMRGHDALRGTVEDYRVTDATAIDFALL 150
            M++++ + RR+L   ES E+WILR+D +M A  WCAKYI+E  L  +Q+NHAIF+I TPTV VRL AG+N Q  G LNWDGRVLP+++FWQM+VG +GL +++  L+GLLGETARPV+ + G A+M G DA RGTVEDYRV+ A  + FALL
Sbjct:  155 MYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFALL 306          
BLAST of mRNA_H-elongata_contig9967.17292.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 2.600e-54
Identity = 87/152 (57.24%), Postives = 116/152 (76.32%), Query Frame = 0
Query:    1 MFEEMQQGRRKLVH-ESFEDWILRFD-HMAAPDWCAKYISERGLDHVQSNHAIFRIVTPTVVVRLLAGINNQQGGNLNWDGRVLPEIDFWQMEVGFEGLVLEHTKLTGLLGETARPVFDDQGHALMRGHDALRGTVEDYRVTDATAIDFALL 150
            M++++ +GRR+L   ES E+WILR+D +M A  WCAKYI+E  L  +Q+NHAIF+I TPTV VRL AG+N Q  G LNWDGRVLP+++FWQ++VG +GL ++   L+GL GETA PV+D+ G A+M G+DA RG VEDYRV+ A  + FALL
Sbjct:  140 MYQDILEGRRQLRGGESLEEWILRYDQNMPARTWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDENGKAVMEGYDAFRGAVEDYRVSSALGVHFALL 291          
BLAST of mRNA_H-elongata_contig9967.17292.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 3.010e-53
Identity = 82/145 (56.55%), Postives = 109/145 (75.17%), Query Frame = 0
Query:    7 QGRRKLVHESFEDWILRFDHMAAPDWCAKYISERGLDHVQSNHAIFRIVTPTVVVRLLAGINNQQGGNLNWDGRVLPEIDFWQMEVGFEGLVLEHTKLTGLLGETARPVFDDQGHALMRGHDALRGTVEDYRVTDATAIDFALLR 151
            +GRR L+ E+FE+W+L F HMAA DWC +YI+ + L  VQS  AI++I+TP VVVR   GI +Q GG++  DGR++P++D W+M+VG  GL LE+  LTG+LGETARPV D+ G A+M+G+ A RGT EDYRV+ A   DFALLR
Sbjct:  206 EGRRHLLSETFEEWVLSFQHMAAHDWCTEYIAHKDLSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRIVPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDFALLR 350          
BLAST of mRNA_H-elongata_contig9967.17292.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.800e-10
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 0
Query:   15 ESFEDWILRFDHMAAPDWCAKYISE-----RGLDHVQSNHAIFRIVTPTVVVRLLAGINNQQGGNLNWDGRVLPEIDFWQMEVGFE 95
            E+  DW++    M AP WC KY+ E       L  ++S+HA+ RI TP + +R+  GIN ++   L  DGRV+P   FWQM+V  E
Sbjct:  402 ETVFDWLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTEREQTLQ-DGRVVPTASFWQMDVRVE 486          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9967.17292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JS96_9PHAE2.210e-5760.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNZ2_9PHAE9.960e-5663.64VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LMW2_ECTSI1.390e-5458.55Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JP37_9PHAE2.600e-5457.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP35_9PHAE3.010e-5356.55Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7G544_ECTSI1.800e-1040.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9967contigH-elongata_contig9967:7764..8222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9967.17292.1mRNA_H-elongata_contig9967.17292.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9967 7749..8296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9967.17292.1 ID=prot_H-elongata_contig9967.17292.1|Name=mRNA_H-elongata_contig9967.17292.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp
MFEEMQQGRRKLVHESFEDWILRFDHMAAPDWCAKYISERGLDHVQSNHA
IFRIVTPTVVVRLLAGINNQQGGNLNWDGRVLPEIDFWQMEVGFEGLVLE
HTKLTGLLGETARPVFDDQGHALMRGHDALRGTVEDYRVTDATAIDFALL
RF*
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