prot_H-elongata_contig996.17288.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig996.17288.1 vs. uniprot
Match: A0A6H5LKE0_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKE0_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 4.390e-20 Identity = 82/197 (41.62%), Postives = 105/197 (53.30%), Query Frame = 0
Query: 11 VYSPRSAANGVVGGLHWSTRLSPRLPNGVINASPAAPSINDGDHQGVGGTE---YRSPKK-RRRSTRPSIAPVDMMTFPATPPVLNNRSRAASSKGKRRASLGA-RDSAGHYRGXXXXXXAGINDEEDVML-ESRVGAGFDHGKMSDAAFDRMLEEMEADRDNDRGXXXXXXXXXXXXXXPP-GYFDSFQTCEWRLR 200
+ S V G S P P G SP A G G + YRSPKK RRRS+RPS+ PV+++ PA+ L SS+GKR+AS+G R+S G XXXXXX DE+ M ++ + +G DH KMSDA FDRML +MEADR ++R XX PP GYFD++ CEWR+R
Sbjct: 3129 TFDDPSPPGSSVHGRRGSGSGLPPQPGG--EPSPTAVEAAAGGSSGAPPADADSYRSPKKQRRRSSRPSVPPVELVVSPASMSPLR------SSRGKRKASMGGGRESFGVXXXXXXXXXXXDGDEDTAMPGDASMKSGLDHSKMSDAEFDRMLADMEADRGSERXXXSGGKAAAQPHSFPPQGYFDTYPKCEWRVR 3317
BLAST of mRNA_H-elongata_contig996.17288.1 vs. uniprot
Match: D7FZH6_ECTSI (WD repeat domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH6_ECTSI) HSP 1 Score: 53.9 bits (128), Expect = 8.230e-5 Identity = 52/128 (40.62%), Postives = 66/128 (51.56%), Query Frame = 0
Query: 28 STRLSPRLPNGVINASPAAPSINDGDHQGVGGTEYRSPKK-RRRSTRPSIAPVDMMTFPATPPVLNNRSRAASSKGKRRASLGA-RDSAGHYRGXXXXXXAGINDEE-----DVMLESRVGAGFDHGK 148
S SP S AP D D EYRSPKK RRRS+RPS+ PV+++ PA+ L SS+GKR+AS+G R+S G G XXXXX DE+ D ++SR G D G+
Sbjct: 2341 SAEPSPTAAEAAAGGSSGAPPA-DAD-----SAEYRSPKKQRRRSSRPSVPPVELVVSPASMSPLR------SSRGKRKASMGGGRESFGVGTGGXXXXXXXDGDEDAVVPGDASMKSRAGPQQDVGR 2456 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig996.17288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig996.17288.1 ID=prot_H-elongata_contig996.17288.1|Name=mRNA_H-elongata_contig996.17288.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bpback to top |