prot_H-elongata_contig99295.17265.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99295.17265.1
Unique Nameprot_H-elongata_contig99295.17265.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
BLAST of mRNA_H-elongata_contig99295.17265.1 vs. uniprot
Match: A0A6H5K5X9_9PHAE (Uroporphyrinogen decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5X9_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 6.200e-38
Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = 0
Query:    1 MISLDQFVDMRLARQRLGQAVPVSGNVDPLVLLGPEAGIKEAVASCVRNAGGHGHILNLGHGVLQQTPESAVAAMVDAAKEARYDAILDGKE 92
            MISLDQFV+MR AR+RLG +VPVSGNVDPLVLLGP +GIKEAV SCVR+AG  GHILNLGHGVLQ TPES+VAA+VD+AKEA Y ++LD +E
Sbjct:  339 MISLDQFVNMRSARERLGASVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAKEATYASVLDREE 430          
BLAST of mRNA_H-elongata_contig99295.17265.1 vs. uniprot
Match: A0A7S0N122_9CRYP (Uroporphyrinogen decarboxylase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N122_9CRYP)

HSP 1 Score: 109 bits (273), Expect = 2.870e-26
Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    1 MISLDQFVDMRLARQRLGQAVPVSGNVDPLVLLGPEAGIKEAVASCVRNAGGHGHILNLGHGVLQQTPESAVAAMVDAAKEARY 84
            MI +D  VDM  AR+ LG  VP+SGNVDPLVL+GPE  I+E+V  C+R  GG GHILNLGHGV++ TPE+AVAA VD AK  RY
Sbjct:  340 MIGVDWAVDMAEARRILGPGVPISGNVDPLVLMGPEEKIRESVRDCIRKGGGQGHILNLGHGVIEPTPEAAVAAFVDEAKRFRY 423          
BLAST of mRNA_H-elongata_contig99295.17265.1 vs. uniprot
Match: A0A7S0TN39_HEMAN (Uroporphyrinogen decarboxylase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TN39_HEMAN)

HSP 1 Score: 107 bits (268), Expect = 1.720e-25
Identity = 54/83 (65.06%), Postives = 66/83 (79.52%), Query Frame = 0
Query:    1 MISLDQFVDMRLARQRLGQAVPVSGNVDPLVLLGPEAGIKEAVASCVRNAGGHGHILNLGHGVLQQTPESAVAAMVDAAKEAR 83
            M+S+D  VDM  AR+ LG  +PVSGNVDPLVL+GPE G++EAV  C+R AGGH HILNLGHGV++ TPE +VAA VD AK+ R
Sbjct:  361 MLSVDWGVDMAEARKTLGD-MPVSGNVDPLVLMGPEEGVREAVRECIRGAGGHSHILNLGHGVIEPTPEESVAAFVDEAKKFR 442          
BLAST of mRNA_H-elongata_contig99295.17265.1 vs. uniprot
Match: A0A7S2UYW2_9STRA (Uroporphyrinogen decarboxylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYW2_9STRA)

HSP 1 Score: 105 bits (262), Expect = 8.390e-25
Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    1 MISLDQFVDMRLARQRLGQAVPVSGNVDPLVLLGPEAGIKEAVASCVRNAGGHGHILNLGHGVLQQTPESAVAAMVDAAK 80
            MI +D  VDM  ARQRLG+  P+SGNVDPLVLLGP+ GI +AV  C++  GG GHILNLGHGV+QQTPE AV   V+ AK
Sbjct:  314 MICVDWAVDMAQARQRLGKDKPISGNVDPLVLLGPKEGIVQAVTDCIKGGGGSGHILNLGHGVVQQTPEEAVGLFVETAK 393          
BLAST of mRNA_H-elongata_contig99295.17265.1 vs. uniprot
Match: A0A836CKK7_9STRA (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKK7_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.690e-24
Identity = 57/84 (67.86%), Postives = 63/84 (75.00%), Query Frame = 0
Query:    1 MISLDQFVDMRLARQRLGQAVPVSGNVDPLVLLGPEAGIKEAVASCVRNAGGHGHILNLGHGVLQQTPESAVAAMVDAAKEARY 84
            MI LDQ V +  AR+RLG  VPVSGNVDP VLL  E  I+ AV  CV  AG  GHILNLGHGV+QQTPE+AVAA VDAAK+ RY
Sbjct:  317 MIGLDQHVLIDDARRRLGADVPVSGNVDPDVLLESEDAIRAAVQDCVARAGPRGHILNLGHGVMQQTPEAAVAAFVDAAKQTRY 400          
BLAST of mRNA_H-elongata_contig99295.17265.1 vs. uniprot
Match: A0A7S0IHZ6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IHZ6_9EUKA)

HSP 1 Score: 97.8 bits (242), Expect = 3.490e-23
Identity = 53/80 (66.25%), Postives = 55/80 (68.75%), Query Frame = 0
Query:    2 ISLDQFVDMRLARQRLGQAVPVSGNVDPLVLLGPEAGIKEAVASCVRNAGGHGHILNLGHGVLQQTPESAVAAMVDAAKE 81
            ISLD   DMRLARQ LG+   V GNVDP VLLG E  I  AV  C+  AGG GHILNLGHGVLQ TPE AV   V AAKE
Sbjct:  133 ISLDWACDMRLARQTLGEERVVQGNVDPTVLLGSEQQIASAVRDCISKAGGRGHILNLGHGVLQGTPEEAVRTFVQAAKE 212          
BLAST of mRNA_H-elongata_contig99295.17265.1 vs. uniprot
Match: A0A7R9UL89_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UL89_DIALT)

HSP 1 Score: 97.1 bits (240), Expect = 4.300e-23
Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    1 MISLDQFVDMRLARQRLGQAVPVSGNVDPLVLLGPEAGIKEAVASCVRNAGGHGHILNLGHGVLQQTPESAVAAMVDAAK 80
            M+SLD   DMR AR+ LG +V V+GN+DPL+L  PE  I+ AV  C+ +AGG GH+LNLGHG+LQ TPE  VAA VD AK
Sbjct:  110 MLSLDWRCDMRTARRTLGASVKVAGNIDPLILFAPEPQIRAAVRQCIDDAGGRGHVLNLGHGILQGTPEVNVAAFVDEAK 189          
BLAST of mRNA_H-elongata_contig99295.17265.1 vs. uniprot
Match: A0A6T5PC14_HETAK (Uroporphyrinogen decarboxylase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5PC14_HETAK)

HSP 1 Score: 100 bits (249), Expect = 5.850e-23
Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 0
Query:    1 MISLDQFVDMRLARQRLGQAVPVSGNVDPLVLLGPEAGIKEAVASCVRNAGGHG--HILNLGHGVLQQTPESAVAAMVDAAKEARYD 85
            M+ +D  VDM  AR+ LG   P+SGN+DP+VLLG EA I+ AV  CV  AGG G  H+LNLGHGV+QQTPE+AVA +VDAAK  R +
Sbjct:  309 MLCVDWAVDMAQARRTLGPDAPISGNIDPMVLLGTEADIRRAVRDCVAGAGGPGNRHVLNLGHGVVQQTPEAAVATLVDAAKALRAE 395          
BLAST of mRNA_H-elongata_contig99295.17265.1 vs. uniprot
Match: A0A0D6RA43_ARACU (Uroporphyrinogen decarboxylase n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6RA43_ARACU)

HSP 1 Score: 97.4 bits (241), Expect = 8.800e-22
Identity = 49/89 (55.06%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    2 ISLDQFVDMRLARQRLGQAVPVSGNVDPLVLLGPEAGIKEAVASCVRNAGGHGHILNLGHGVLQQTPESAVAAMVDAAKEARYDAILDG 90
            I LD  VDM+  RQRLGQ++ V GNVDP +L  P   ++E +   VRNAG HGHILNLGHGVL  TPE AV    D A+   YD++L G
Sbjct:  313 IGLDWTVDMKDGRQRLGQSIQVQGNVDPALLFAPLPALEEEIQRVVRNAGRHGHILNLGHGVLVGTPEEAVGHFFDVARSLSYDSLLAG 401          
BLAST of mRNA_H-elongata_contig99295.17265.1 vs. uniprot
Match: A0A8J6CDY3_DIALT (Uroporphyrinogen decarboxylase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDY3_DIALT)

HSP 1 Score: 97.1 bits (240), Expect = 9.910e-22
Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    1 MISLDQFVDMRLARQRLGQAVPVSGNVDPLVLLGPEAGIKEAVASCVRNAGGHGHILNLGHGVLQQTPESAVAAMVDAAK 80
            M+SLD   DMR AR+ LG +V V+GN+DPL+L  PE  I+ AV  C+ +AGG GH+LNLGHG+LQ TPE  VAA VD AK
Sbjct:  301 MLSLDWRCDMRTARRTLGASVKVAGNIDPLILFAPEPQIRAAVRQCIDDAGGRGHVLNLGHGILQGTPEVNVAAFVDEAK 380          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99295.17265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5X9_9PHAE6.200e-3877.17Uroporphyrinogen decarboxylase n=2 Tax=Ectocarpus ... [more]
A0A7S0N122_9CRYP2.870e-2664.29Uroporphyrinogen decarboxylase n=1 Tax=Cryptomonas... [more]
A0A7S0TN39_HEMAN1.720e-2565.06Uroporphyrinogen decarboxylase n=2 Tax=Hemiselmis ... [more]
A0A7S2UYW2_9STRA8.390e-2565.00Uroporphyrinogen decarboxylase n=1 Tax=Fibrocapsa ... [more]
A0A836CKK7_9STRA1.690e-2467.86Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=... [more]
A0A7S0IHZ6_9EUKA3.490e-2366.25Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7R9UL89_DIALT4.300e-2360.00Hypothetical protein n=1 Tax=Diacronema lutheri Ta... [more]
A0A6T5PC14_HETAK5.850e-2359.77Uroporphyrinogen decarboxylase n=1 Tax=Heterosigma... [more]
A0A0D6RA43_ARACU8.800e-2255.06Uroporphyrinogen decarboxylase n=2 Tax=Araucariace... [more]
A0A8J6CDY3_DIALT9.910e-2260.00Uroporphyrinogen decarboxylase n=2 Tax=Diacronema ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038071UROD/MetE-like superfamilyGENE3D3.20.20.210coord: 1..84
e-value: 1.8E-24
score: 88.1
IPR038071UROD/MetE-like superfamilySUPERFAMILY51726UROD/MetE-likecoord: 2..84
IPR000257Uroporphyrinogen decarboxylase (URO-D)PFAMPF01208URO-Dcoord: 2..81
e-value: 3.5E-21
score: 75.7
NoneNo IPR availablePANTHERPTHR21091METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATEDcoord: 2..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99295contigH-elongata_contig99295:1959..2261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99295.17265.1mRNA_H-elongata_contig99295.17265.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99295 1959..2270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99295.17265.1 ID=prot_H-elongata_contig99295.17265.1|Name=mRNA_H-elongata_contig99295.17265.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MISLDQFVDMRLARQRLGQAVPVSGNVDPLVLLGPEAGIKEAVASCVRNA
GGHGHILNLGHGVLQQTPESAVAAMVDAAKEARYDAILDGKETIHSRVGV
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038071UROD/MetE-like_sf
IPR000257Uroporphyrinogen_deCOase