prot_H-elongata_contig99216.17261.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99216.17261.1
Unique Nameprot_H-elongata_contig99216.17261.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig99216.17261.1 vs. uniprot
Match: D7FQC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQC5_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 4.270e-8
Identity = 53/152 (34.87%), Postives = 73/152 (48.03%), Query Frame = 0
Query:   16 RGGSLSADSR---WLDTLTEPFLARSSSSSFFCASGRQQA--HARTET-----------NEPSLDIYPDLADTFDD-------AVRWLRSDIDSVTRVFTREVA-RSPAPWP----GFA---MVAKEGGEIDLTVKLELLWKGKCPRYHLDR 136
            RG S  AD+    WLD L       SSSS+   A GR  A    R+E             + +  ++P L +           A RWL++DI  V R+F RE++  S  P      G A   +  K+   +D+TVKLELL +GKCPR+HLD+
Sbjct:   69 RGDSDDADNEGDGWLDNLVASIGNSSSSSN---AGGRDNAGEEPRSENLARRRIQGEILQDDASPLHPKLPNLQQQLDVKAQAAARWLKADIKRVARIFAREISVLSDEPGETSLLGIATEPLARKDKRTVDVTVKLELLTRGKCPRFHLDK 217          
BLAST of mRNA_H-elongata_contig99216.17261.1 vs. uniprot
Match: A0A6H5JL98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL98_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 2.320e-7
Identity = 55/152 (36.18%), Postives = 69/152 (45.39%), Query Frame = 0
Query:   16 RGGSLSADSR---WLDTLTEPFLARSSSSSFFCASGRQQAH--------ARTETNEPSLDIY--------PDLADTFD----DAVRWLRSDIDSVTRVFTREVA-RSPAPWP----GFAMVAKEGGE---IDLTVKLELLWKGKCPRYHLDR 136
            RG S  AD+    WLD +       SSSS+   A GR            AR      +L  Y        P L    D     AVRWL++DI  V R+F RE++  S  P      G A     G +    D+TVKLELL +GKCPR+HLD+
Sbjct:  159 RGDSDDADNEGEGWLDKIAASIGNSSSSSN---AGGRDNEGEERRSENLARRRVQGETLQDYESPLNLNLPSLQQQLDVEAQAAVRWLKADIKRVARIFAREISVLSDEPGETSLLGVATEPSAGKDERTFDVTVKLELLKRGKCPRFHLDK 307          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99216.17261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQC5_ECTSI4.270e-834.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL98_9PHAE2.320e-736.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99216contigH-elongata_contig99216:1799..2206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99216.17261.1mRNA_H-elongata_contig99216.17261.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99216 329..2206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99216.17261.1 ID=prot_H-elongata_contig99216.17261.1|Name=mRNA_H-elongata_contig99216.17261.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MFAEEAVSPFKVEVFRGGSLSADSRWLDTLTEPFLARSSSSSFFCASGRQ
QAHARTETNEPSLDIYPDLADTFDDAVRWLRSDIDSVTRVFTREVARSPA
PWPGFAMVAKEGGEIDLTVKLELLWKGKCPRYHLDR
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