prot_H-elongata_contig99147.17255.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99147.17255.1
Unique Nameprot_H-elongata_contig99147.17255.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length162
Homology
BLAST of mRNA_H-elongata_contig99147.17255.1 vs. uniprot
Match: D7FR36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR36_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 2.190e-32
Identity = 59/108 (54.63%), Postives = 70/108 (64.81%), Query Frame = 0
Query:   55 EYLIDLSRNTDTDGQLTAVGSCGLFRSWDSTTAEEIELLGSGCDDYDPCEGACGEFQECTMSFDFYVGASFYCADTCDPSPCAEDEVCELLSSICSGELASCPPVAYC 162
            EYLIDL+R +D  G L A G CG+FR WD     E+E    GCDDYDPC G CGEFQ C+ S+  Y  AS++C+DTCDPSPC+E E C L   +CS     C PVA C
Sbjct:    8 EYLIDLNRQSD--GSLRAAGICGVFREWDEADRVELE---EGCDDYDPCNGECGEFQVCSRSYFSYSDASYFCSDTCDPSPCSEGEECTLTYPVCSASEV-CGPVADC 109          
BLAST of mRNA_H-elongata_contig99147.17255.1 vs. uniprot
Match: A0A6H5L054_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L054_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 9.310e-27
Identity = 58/122 (47.54%), Postives = 71/122 (58.20%), Query Frame = 0
Query:    1 EGESSNEDVVYQVEIIEAFKWGEDD--TSYTDGTMDISLTTGGNSALCGIFMEI--GEEYLIDLSRNTDTDGQLTAVGSCGLFRSWDSTTAEEIELLGSGCDDYDPCEGACGEFQECTMSFD 118
            +GE  N D +Y +E IE FK  ED     Y +      +TT GNS LCG++M+     EYLIDL+R +D  G L A G CG+FR WD     E+E    GCDDYDPC G CGEFQ C  + D
Sbjct:   11 DGEDINSDDIYTLETIEVFK-AEDPGPNEYDEAGSQFEITTAGNSGLCGVYMDADGSTEYLIDLNRQSD--GSLRAAGICGVFREWDEADRAELE---EGCDDYDPCNGECGEFQVCLCNKD 126          
BLAST of mRNA_H-elongata_contig99147.17255.1 vs. uniprot
Match: D8LCN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN7_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 2.340e-26
Identity = 69/167 (41.32%), Postives = 92/167 (55.09%), Query Frame = 0
Query:    6 NEDVVYQVEIIEAFKWGEDDTSYTDGTMDISLTTGGNSALCGIFMEIGEEYLIDL---------SRNTDTDGQLTAVGSCGLFRSWDSTTAEEIELLGSGCDDYDPCEGACGEFQECTMSFDFYVGASFYCADTCD-PSPCAEDEVCELLSSICSGELASCPPVAYC 162
            NEDV + V++   +      +   DG  +IS  TGGNSA+CG+ + IGEEYL+ L         S    T GQLT VG C L R W     +E   L +GC +   C+ +CGEFQEC + ++  + + +YCADTCD P  CA++E C L    C    A CPPVA C
Sbjct:   67 NEDVTFTVQVNAVY------SGDVDGQDEISFVTGGNSAICGVDLTIGEEYLLGLYPAGDDPFDSTGGGTAGQLT-VGLCDLARVWSDVPDDEKADLEAGCGE---CDVSCGEFQECLL-YEDGLESEYYCADTCDDPDRCADNETCVLTEVACIR--APCPPVASC 220          
BLAST of mRNA_H-elongata_contig99147.17255.1 vs. uniprot
Match: D7G2B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B7_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.060e-21
Identity = 57/143 (39.86%), Postives = 78/143 (54.55%), Query Frame = 0
Query:   30 DGTMDISLTTGGNSALCGIFMEIGEEYLIDLSRNTDTDGQLTAVGSCGLFRSWDSTTAEEIELLGSGCDDYDPCEGACGEFQECTMSFDFYV----------GASFYCADTCDPSPCAEDEVCELLSSICSGELASCPPVAYC 162
            D  ++I +TT  ++A CG+++++G EYL+DL R     G+L +VG+CG  +SW +  A+ I  LG      DPC  ACGE Q+C +  D             G  FYCADTC    C  +E C L  S C+G    CPPVA C
Sbjct:   49 DYPVEIEVTTSASAAHCGVYLQVGGEYLLDLYRYK---GELRSVGACGATQSWTTLPADRIATLGDINSACDPC-AACGESQDCLLYTDGDSTTTXXXVTGGGEEFYCADTCAAGVCGAEETCYLNESDCTG--GPCPPVAEC 185          
BLAST of mRNA_H-elongata_contig99147.17255.1 vs. uniprot
Match: A0A6H5JAS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS0_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.840e-20
Identity = 54/143 (37.76%), Postives = 76/143 (53.15%), Query Frame = 0
Query:   30 DGTMDISLTTGGNSALCGIFMEIGEEYLIDLSRNTDTDGQLTAVGSCGLFRSWDSTTAEEIELLGSGCDDYDPCEGACGEFQECTMSFDFYV----------GASFYCADTCDPSPCAEDEVCELLSSICSGELASCPPVAYC 162
            D  ++I +TT  ++A CG+++++G EYL+DL R     G+L +VG+CG  +SW +  A+ I  LG       PC  ACGE Q+C +  D             G  FYCADTC    C  +E C L  + C+     CPPVA C
Sbjct:   61 DYPVEIEVTTSASAADCGVYLQVGGEYLLDLYRYK---GELRSVGACGATQSWTTLPADRIATLGDINRACHPC-AACGESQDCLLYTDGDSTTTSSSVTGGGKEFYCADTCAAGVCGAEETCYLNEAHCTE--GPCPPVAEC 197          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99147.17255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FR36_ECTSI2.190e-3254.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L054_9PHAE9.310e-2747.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCN7_ECTSI2.340e-2641.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2B7_ECTSI1.060e-2139.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAS0_9PHAE3.840e-2037.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001820Protease inhibitor I35 (TIMP)PFAMPF00965TIMPcoord: 6..91
e-value: 5.6E-7
score: 29.5
NoneNo IPR availableGENE3D2.40.50.120coord: 1..98
e-value: 7.7E-7
score: 31.3
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 7..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99147contigH-elongata_contig99147:1176..2120 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99147.17255.1mRNA_H-elongata_contig99147.17255.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99147 1176..2120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99147.17255.1 ID=prot_H-elongata_contig99147.17255.1|Name=mRNA_H-elongata_contig99147.17255.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=162bp
EGESSNEDVVYQVEIIEAFKWGEDDTSYTDGTMDISLTTGGNSALCGIFM
EIGEEYLIDLSRNTDTDGQLTAVGSCGLFRSWDSTTAEEIELLGSGCDDY
DPCEGACGEFQECTMSFDFYVGASFYCADTCDPSPCAEDEVCELLSSICS
GELASCPPVAYC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001820TIMP
IPR008993TIMP-like_OB-fold