prot_H-elongata_contig9893.17236.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig9893.17236.1
Unique Name	prot_H-elongata_contig9893.17236.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	142

Homology

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BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot
Match: D8LT33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT33_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 4.970e-61
Identity = 104/141 (73.76%), Postives = 115/141 (81.56%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLKQKASAASIGLREYLPPYRNALHAFYKICRDEGLRGIQAGLLPGLVYQVLMNGTRLSLFGRIQKALGVDREKNGETSFFLRNLAAGAASGATGALVGSPAFLVKARLQSQSTVHSLRTPGAGEFR 141
            M+VVKTRMQLQ ELVL+ KA  +    + Y  PY+NALHAFYKICRDEG+RGIQAGLLPGL+YQ+LMNGTRLSLF  +QKALGVD E  G+  FF RNLAAGAA GA GAL+GSP FLVKARLQSQS  HSLRT G GEFR
Sbjct:   78 MDVVKTRMQLQSELVLR-KAGQSQQTTQVYRAPYKNALHAFYKICRDEGVRGIQAGLLPGLMYQILMNGTRLSLFAPVQKALGVDAENKGKIGFFFRNLAAGAACGAAGALIGSPVFLVKARLQSQSKAHSLRTAGGGEFR 217

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BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot
Match: A0A6H5L6Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z3_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 1.030e-58
Identity = 101/141 (71.63%), Postives = 113/141 (80.14%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLKQKASAASIGLREYLPPYRNALHAFYKICRDEGLRGIQAGLLPGLVYQVLMNGTRLSLFGRIQKALGVDREKNGETSFFLRNLAAGAASGATGALVGSPAFLVKARLQSQSTVHSLRTPGAGEFR 141
            M+VVKTRMQLQ ELVL+ KA  +    + Y  PY+NALHAFYKICRDEG+RGIQAGLLPG++YQ+LMNGTRLSLF  +QK LGVD E  G+  FF RNLAAGAA GA GAL+ SP FLVKARLQSQS  HSLRT G GEFR
Sbjct:    1 MDVVKTRMQLQSELVLR-KAGQSRQMTQVYRAPYKNALHAFYKICRDEGVRGIQAGLLPGIMYQILMNGTRLSLFAPVQKVLGVDVENKGKIGFFFRNLAAGAACGAAGALIASPVFLVKARLQSQSKAHSLRTAGGGEFR 140

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BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot
Match: A0A835YMV3_9STRA (Solute carrier family 25 member 34 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV3_9STRA)

HSP 1 Score: 149 bits (376), Expect = 6.320e-42
Identity = 84/140 (60.00%), Postives = 99/140 (70.71%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLKQKASAASIGLREYLPPYRNALHAFYKICRDEGLRGIQAGLLPGLVYQVLMNGTRLSLFGRIQKALGVDREKNGETSFFLRNLAAGAASGATGALVGSPAFLVKARLQSQSTVHSLRTPGAGEF 140
            MEVVKTR QLQGEL    K+S   I        Y++   AFYKI RDEGLRGIQAGLLPG++YQ  MNGTRL +F  +Q+ L  D + +G+ SFF +NLAAGA SGA GA VGSP FLVKARLQ QS+VH +R+ GA  F
Sbjct:    1 MEVVKTRFQLQGELA---KSSPNRI--------YKHVFDAFYKIARDEGLRGIQAGLLPGILYQSTMNGTRLGMFAPLQRFLKADAKTDGQVSFFFKNLAAGAISGACGAAVGSPFFLVKARLQGQSSVHKIRSAGAEVF 129

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BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot
Match: A0A024UT24_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UT24_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.640e-31
Identity = 71/132 (53.79%), Postives = 86/132 (65.15%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLKQKASAASIGLREYLPPYRNALHAFYKICRDEGLRGIQAGLLPGLVYQVLMNGTRLSLFGRIQKALGVDREKNGETSFFLRNLAAGAASGATGALVGSPAFLVKARLQSQSTVHSL 132
            MEVVKTRMQLQGEL  K                YRN++HAFY ICR EG+ GIQ GL+ G+ YQ  MNG RL  F ++Q+  G     +   SF LRN+AAGA SGA GA++GSP FLVKARLQ+QST  ++
Sbjct:   35 MEVVKTRMQLQGELASKGAPIV-----------YRNSIHAFYTICRLEGIAGIQRGLVAGMCYQSFMNGARLGFFEKLQQVFGATDPNH--FSFPLRNMAAGATSGAVGAMMGSPFFLVKARLQAQSTAATI 153

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BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot
Match: A0A6A5AIL5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AIL5_9STRA)

HSP 1 Score: 119 bits (298), Expect = 8.300e-30
Identity = 73/131 (55.73%), Postives = 86/131 (65.65%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLKQKASAASIGLREYLPPYRNALHAFYKICRDEGLRGIQAGLLPGLVYQVLMNGTRLSLFGRIQKALGVDREKNGETSFFLRNLAAGAASGATGALVGSPAFLVKARLQSQSTVHS 131
            MEVVKTRMQLQGEL     A  A I        YRN+ HAFY ICR EG+ GIQ GL+ G+ YQ  MNG RL  F ++Q+  G     +   SF LRN+AAGA SGA GA++GSP FLVKARLQ+QS+  S
Sbjct:   56 MEVVKTRMQLQGELA----ARGAPI-------VYRNSFHAFYTICRLEGIAGIQRGLVAGMFYQSFMNGARLGFFEQLQQVYGATDPNH--YSFPLRNMAAGATSGALGAIMGSPFFLVKARLQAQSSAVS 173

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BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot
Match: A0A484E3G6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3G6_BRELC)

HSP 1 Score: 118 bits (295), Expect = 1.400e-29
Identity = 68/128 (53.12%), Postives = 84/128 (65.62%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLKQKASAASIGLREYLPPYRNALHAFYKICRDEGLRGIQAGLLPGLVYQVLMNGTRLSLFGRIQKALGVDREKNGETSFFLRNLAAGAASGATGALVGSPAFLVKARLQSQST 128
            MEV+KTRMQLQGEL      ++ S+ +  Y    RN  HAFY ICR EGLRGIQ GLLPG+ YQ+ MNG RL LF  +QK +G     +    F +RN+ A A SG  GA +GSP +LVKAR+Q+ ST
Sbjct:   27 MEVIKTRMQLQGELA--HNVTSGSVPVVRY----RNFAHAFYTICRTEGLRGIQRGLLPGISYQIFMNGPRLGLFAPLQKVVGATDPTS--VWFPVRNVCAAATSGMIGACIGSPFYLVKARIQAAST 146

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BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot
Match: A0A6G0XPW9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPW9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.050e-29
Identity = 69/132 (52.27%), Postives = 82/132 (62.12%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLKQKASAASIGLREYLPPYRNALHAFYKICRDEGLRGIQAGLLPGLVYQVLMNGTRLSLFGRIQKALGVDREKNGETSFFLRNLAAGAASGATGALVGSPAFLVKARLQSQSTVHSL 132
            MEVVKTRMQLQGEL  K                YRN+ HAFY ICR EG+ GIQ GL  G+ YQ  MNG RL LF  +Q+  G     +   S+ LRN+ AGA SGA GA++GSP FLVKARLQ+QS   ++
Sbjct:   33 MEVVKTRMQLQGELAAKGAPIV-----------YRNSFHAFYTICRLEGIAGIQRGLTAGMFYQTFMNGARLGLFEHLQRVYGATDPTS--YSYPLRNMLAGATSGAIGAIMGSPFFLVKARLQAQSNASTI 151

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BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot
Match: A0A485KSQ5_9STRA (Aste57867_11310 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSQ5_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.190e-28
Identity = 67/132 (50.76%), Postives = 84/132 (63.64%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLKQKASAASIGLREYLPPYRNALHAFYKICRDEGLRGIQAGLLPGLVYQVLMNGTRLSLFGRIQKALGVDREKNGETSFFLRNLAAGAASGATGALVGSPAFLVKARLQSQSTVHSL 132
            MEVVKTRMQLQGEL  K                YRN+ HAF+ ICR EG+ GIQ GL+ G+ YQ LMNG+RL  F ++Q+  G     +   S+  RN+ AGA SG+ GA++GSP FLVKARLQ+QS   S+
Sbjct:   36 MEVVKTRMQLQGELAAKGAPIV-----------YRNSFHAFFTICRLEGVAGIQRGLVAGMCYQTLMNGSRLGFFEQLQQVYGATDPNH--ISYPFRNMLAGATSGSIGAMMGSPFFLVKARLQAQSNAASI 154

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BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot
Match: D0MSA3_PHYIT (Mitochondrial Carrier (MC) Family n=2 Tax=Phytophthora TaxID=4783 RepID=D0MSA3_PHYIT)

HSP 1 Score: 112 bits (281), Expect = 1.500e-28
Identity = 68/128 (53.12%), Postives = 79/128 (61.72%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLKQKASAASIGLREYLPPYRNALHAFYKICRDEGLRGIQAGLLPGLVYQVLMNGTRLSLFGRIQKALGVDREKNGETSFFLRNLAAGAASGATGALVGSPAFLVKARLQSQST 128
            MEV+KTRMQLQGEL       AA +        YRN  HAFY I R EGLRGIQ GL PG+ YQ+ MNG RL LF  +QK  G         SF +RN+ A A SG  GA +GSP FLVKAR+Q+ S+
Sbjct:    1 MEVIKTRMQLQGELAHNVTRGAAPV------VQYRNFAHAFYTIGRTEGLRGIQRGLGPGISYQIFMNGPRLGLFEPMQKVFGATDPT--AYSFPIRNVCAAATSGMIGAFIGSPFFLVKARIQAASS 120

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BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot
Match: K3WA37_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA37_GLOUD)

HSP 1 Score: 115 bits (287), Expect = 2.760e-28
Identity = 71/132 (53.79%), Postives = 82/132 (62.12%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLKQKASAASIGLREYLPPYRNALHAFYKICRDEGLRGIQAGLLPGLVYQVLMNGTRLSLFGRIQKALGVDREKNGETSFFLRNLAAGAASGATGALVGSPAFLVKARLQSQSTVHSL 132
            MEVVKTRMQLQGEL     A  A   +R     YRN  H F+ ICR EGL GIQ GLLPG+ YQ  +N  RL LF  IQK  G     +   SF +RNLAA A SG  GA VGSP FLVKAR+Q+ S+  ++
Sbjct:   40 MEVVKTRMQLQGELAKTAVAGNAVPTVR-----YRNFAHGFFTICRTEGLVGIQRGLLPGMAYQTFLNAPRLGLFEPIQKLYGATDPTH--FSFPIRNLAAAATSGLIGACVGSPFFLVKARIQAASSAATI 164

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot

BLAST of mRNA_H-elongata_contig9893.17236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LT33_ECTSI	4.970e-61	73.76	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L6Z3_9PHAE	1.030e-58	71.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YMV3_9STRA	6.320e-42	60.00	Solute carrier family 25 member 34 n=1 Tax=Tribone...	[more]
A0A024UT24_9STRA	3.640e-31	53.79	Uncharacterized protein n=4 Tax=Aphanomyces invada...	[more]
A0A6A5AIL5_9STRA	8.300e-30	55.73	Uncharacterized protein n=3 Tax=Aphanomyces astaci...	[more]
A0A484E3G6_BRELC	1.400e-29	53.13	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A6G0XPW9_9STRA	2.050e-29	52.27	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A485KSQ5_9STRA	1.190e-28	50.76	Aste57867_11310 protein n=1 Tax=Aphanomyces stella...	[more]
D0MSA3_PHYIT	1.500e-28	53.13	Mitochondrial Carrier (MC) Family n=2 Tax=Phytopht...	[more]
K3WA37_GLOUD	2.760e-28	53.79	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023395	Mitochondrial carrier domain superfamily	GENE3D	1.50.40.10		coord: 1..138 e-value: 3.7E-25 score: 90.2
IPR023395	Mitochondrial carrier domain superfamily	SUPERFAMILY	103506	Mitochondrial carrier	coord: 1..129
IPR018108	Mitochondrial substrate/solute carrier	PFAM	PF00153	Mito_carr	coord: 1..82 e-value: 3.1E-9 score: 36.6 coord: 94..131 e-value: 5.9E-6 score: 26.1
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 1..81 score: 15.24
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 93..141 score: 8.054
None	No IPR available	PANTHER	PTHR45928	FAMILY NOT NAMED	coord: 1..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig9893	contig	H-elongata_contig9893:7998..8905 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig9893.17236.1	mRNA_H-elongata_contig9893.17236.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig9893 7998..8905 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig9893.17236.1 ID=prot_H-elongata_contig9893.17236.1|Name=mRNA_H-elongata_contig9893.17236.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
MEVVKTRMQLQGELVLKQKASAASIGLREYLPPYRNALHAFYKICRDEGL
RGIQAGLLPGLVYQVLMNGTRLSLFGRIQKALGVDREKNGETSFFLRNLA
AGAASGATGALVGSPAFLVKARLQSQSTVHSLRTPGAGEFR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023395	Mt_carrier_dom_sf
IPR018108	Mitochondrial_sb/sol_carrier