prot_H-elongata_contig98752.17216.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98752.17216.1
Unique Nameprot_H-elongata_contig98752.17216.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length274
Homology
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A6H5KN83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN83_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 6.510e-73
Identity = 151/344 (43.90%), Postives = 193/344 (56.10%), Query Frame = 0
Query:    1 MSGLDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASS--ANPSQGSSNDISSYLHMSSEESTEAGPADKLS------------------VVGSDQTTDG-------------QLSYVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIV-----------------------------LLEGELSFPVKL--DGERDVDWELKDFPGTIVSR-----AAHNVASSTPNASSA----AKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKHRTAWEEALGMYKENIAKRKAQGKIPIDIGE 271
            MSG+DYSKWDKMA E+SDSD+D    GN P+VT FD+PQSVTFGG ++S  A    G+S+D  ++   +   S  A PAD  +                  ++  ++ T+               L YVWRQTR+EV VVVP P   R+ DV VSL  KPETIAEGV     V V                             +LEGEL+F  KL  + E +V+WELKD+PGT V+R     +   V S+ P A +A    A  +S  DRRG+E+ L KH P+P  A WWKSLLKGGPEIDV+AI+GR  N H++ WEEALGM+KE +A RK Q KI +D+ E
Sbjct:    1 MSGVDYSKWDKMASEMSDSDDDN---GNNPEVTTFDQPQSVTFGGTSASQAAEGWDGASDDSGAHPDTTPSSSGVAAPADGSTGAVAAAATGTTPTPQVKPLISDERLTENGAAVRGDANAGRQALQYVWRQTRAEVVVVVPVPAGTRAGDVEVSLRAKPETIAEGVADLIRVAVKATRGRDGAASRELGTAATAPGGGTKLVPVLEGELAFQAKLGAEDEGEVEWELKDYPGTAVARDDPDSSGDPVGSAPPPAPAAGAREASSSSNGDRRGVEIVLKKHCPVPNAAVWWKSLLKGGPEIDVAAIKGRATNNHQSVWEEALGMFKEQVAARKGQPKISVDMEE 341          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A836CJH1_9STRA (CS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH1_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.760e-32
Identity = 103/298 (34.56%), Postives = 153/298 (51.34%), Query Frame = 0
Query:    4 LDYSKWDKMAREVSDS-DEDGDNIGNIPQVTAFDKPQSVTFGGAASSANPS----------QGSSNDISSYLHMSSEESTEAGPADK------LSVVGSDQTTD-GQLSYVWRQTRSEVTVVVPSPPEIRSVDV---VVSLSPKPETIAEG-----VETRKEVIVLLEGELSFPVKLDGE--RDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPV---NKHRTAWEEALGMYKENIAKRKAQGKIPIDIG 270
            +DYSKWDKMA ++SDS DE+G   G+ P VTAFD P SVT+GG  +                      SS     +++S  A   DK      L+  G+    D G  +Y W Q+R +V + V +PP  R+ +V   V S +  P   A+      ++   +  +LLEG+L++PV LD +    VDW L+D  G     A  +   S  + S+A + +     R I VTL KHSPI G A WWK  +KGGP ID++AI+GR     +  +  W+EA+  ++  + + K + +  +DIG
Sbjct:    2 VDYSKWDKMAADMSDSEDEEG---GSKPVVTAFDNPTSVTWGGGDAPEEERLXXXXXXXXXXXXXXXXSSAGTPGADDSKRAALTDKPARLLTLTRNGAAVQDDCGAYTYFWSQSRGDVAITVVAPPGTRASEVEVKVTSDASAPTLAAQAPLGHHLKVSAKGAILLEGDLTYPVALDPDDPESVDWVLQDL-GLPARPAPESAVES--DVSTADQSSERSPARAITVTLRKHSPIAGAALWWKGAVKGGPTIDMAAIEGRDAKGASASQKVWDEAMEGFRARVKQLKLE-RTEVDIG 292          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: W7TNN6_9STRA (CS-like domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNN6_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.010e-26
Identity = 82/267 (30.71%), Postives = 129/267 (48.31%), Query Frame = 0
Query:    4 LDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASSANPSQGSSNDISSYLHMSSEESTEAGPADKLSVVGSDQTTDGQL--SYVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKHRTAWEEALGMYKENIAKRKAQGKIPID 268
            +DYSKWD +  + SD DED +     P+VT F++P SVT GG            + I S     S  ST   PA ++  +      +GQ   ++ WRQ R E  + + +PP  R+ DV V+ +     ++  + T   V VL+EG L+ P++L+   +V+WE+    G                     +       R + V+L K +P P +  WW  +  G  EID S I GR +N  + AWEEA   ++E++A+R AQG + ++
Sbjct:    6 IDYSKWDHL--DTSD-DEDEEEKRGPPRVTHFNEPMSVTVGGH----------DHLIPSRSPAPSPSSTTPHPASRIEDISE----NGQSFPTFTWRQDRGEAIMHIWAPPCTRAKDVQVTYTRDTNHLSVRITTPTAVPVLVEGPLANPIQLEEGEEVEWEMVGEGG---------------------RXXXXXXXRAVRVSLIKSTPRPDMVHWWSRVFVGDDEIDTSRIAGRKMN-FQGAWEEAQRRFREDVARRNAQGPVEVE 233          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A1J4MGJ4_9CRYT (Nuclear move domain-containing protein n=1 Tax=Cryptosporidium ubiquitum TaxID=857276 RepID=A0A1J4MGJ4_9CRYT)

HSP 1 Score: 91.7 bits (226), Expect = 1.960e-18
Identity = 81/272 (29.78%), Postives = 121/272 (44.49%), Query Frame = 0
Query:    1 MSGLDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASSANPSQGSSNDISSYLHMSSEESTEAGPADKLSVVGSDQTTDGQLS-----YVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQ--GRPVNKHRT-----AWEEALGMYKENIAKRK 260
            MSG+DYSKWDK+  E+S SDE+   +G+   VT FD PQS+T GG   S   S  SSN +   L       T++    +  V+  D    G  S     Y W QT + +T+++   P  ++ D+ V+++    T+  G ET     +L E E  + VK D +  + W +K+         A N  S                 R + + L K      +  WWK + KGG E D+S       P ++ R      AWEEA   ++  I  R+
Sbjct:    1 MSGIDYSKWDKI--EIS-SDEESGKLGSKCNVTRFDSPQSITIGGQRESKEDSLVSSNILVDDLK------TKSVLVSREKVISLDDYVFGGKSACGKDYYWTQTENGLTIILEIDPGTQNKDLKVNVTEDKVTVTHGSET-----ILFE-EFEYGVK-DDDNTIFWSVKEVESL---NGAQNKRS-----------------RMLVLELEKKELDTSIRLWWKKIFKGGIEADISKFSRFSSPKSEERNRKFLEAWEEAHNEFRNKIKNRQ 236          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A2P4YYV1_9CRYT (CS domain protein n=4 Tax=Cryptosporidium TaxID=5806 RepID=A0A2P4YYV1_9CRYT)

HSP 1 Score: 86.3 bits (212), Expect = 2.050e-16
Identity = 75/274 (27.37%), Postives = 122/274 (44.53%), Query Frame = 0
Query:    1 MSGLDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASSANPSQGSSNDISSYLHMSSEESTEAGPADKLSVVGSDQTTDGQLS-----YVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDFPG--TIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAI-------QGRPVNKHRTAWEEALGMYKENIAKRK 260
            MSG+DYSKWDK+  E+S SDE+ +   +   VT FD P S+TFGG   S        N ++S + +   +  E G   +  ++  +    G  S     Y W QT +++T+V+   PE++S D  V+++    TI  G+ET     +LLE +  + VK D +  + W +KD      + ++   N                    + + + L K      +  WWK + KGG E D+S         +     K    WE+A   ++  I  R+
Sbjct:    1 MSGIDYSKWDKI--EIS-SDEESEKSVSRCNVTRFDSPHSITFGGHIESEED-----NKVNSDVKVEEFKKIEPGHVSREKILSLNDYVFGGKSKNGKNYYWTQTENDLTIVIEISPEMQSKDFKVNVTESDITIMYGLET-----ILLE-KFEYEVKYD-DNTIFWSIKDVESFDKVQNKRIIN--------------------KMLVLELEKKELNNSIRIWWKRIFKGGIETDISKFNRFTSSNKEERNKKFLQVWEKAHDEFRNKIKNRQ 239          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A4D9D0Z5_9STRA (CS domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Z5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.570e-16
Identity = 53/180 (29.44%), Postives = 87/180 (48.33%), Query Frame = 0
Query:   90 DGQLS--YVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKHRTAWEEALGMYKENIAKRKAQGKIPI 267
            +GQ S  + WRQ + EV + + + P  R+ DV V+ S     ++  + T   V VL+EG L+ P++++ E +V+WE+    G                     +         + V+L K  P   +  WW  +  G  EID S I GR +N  + AWEEA   ++E++A+R AQG + +
Sbjct:   60 NGQSSPNFAWRQDKEEVILHIWAAPSTRAKDVQVTYSRDTNHLSVRITTPTAVPVLVEGTLANPIQVEEEEEVEWEMVGEGG---------------------RXXXXXXXXAVRVSLLKAVPRSDMVHWWSRVFVGDDEIDTSRIAGRKMN-FQGAWEEAQRKFREDVARRNAQGPVEV 217          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: X6NBK4_RETFI (CS domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NBK4_RETFI)

HSP 1 Score: 74.3 bits (181), Expect = 1.070e-11
Identity = 82/318 (25.79%), Postives = 128/318 (40.25%), Query Frame = 0
Query:    1 MSGLDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASSANPSQGSSNDISSYLHMSSEESTEAGPADKLSVVGS------DQ------------------------------TTDGQLS--YVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLL--------EGELSFPVKLDGERD--VDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKH--RTAWEEALGMYKENIAKRKAQGKIPID 268
            M+G++YSKW+K+A  +  SDE+  +  N P VT  D+P SVT G    + NPS  S+N  ++  + S  + T   P  K S   +      DQ                              T +G  +  Y+W QTR EV + + + P          LS K ++I       K  + +           ELS+ +    E D  ++WE+K FP    +  A  +                   + + + L K      V  WW ++ KG P IDV+AI+ R  +    R  W+ A   +KE + + + Q  I ID
Sbjct:    1 MTGINYSKWNKIAEALDSSDEE--SASNTPHVTKLDRPSSVTIGPTGVTINPSP-SNNQSTNANNKSVVKKTIENPTAKQSYNSTVPRQQKDQKATIVKPQNNEIIESKVKTKTLSELKAEVLTVNGGETDEYMWSQTRDEVVLFIKNIP----------LSTKAKSIKIQYNEEKNTVFIQCLDKILYNNKELSYNIVKTKEEDCGLEWEIKTFPFCDTNGIASQM-------------------KLLTIYLKKKEFSANVITWWGNVFKGDPSIDVAAIKERKTDAKTMRNIWQSAHESFKEKVKQFQPQ-TIEID 285          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A7S0AUT3_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AUT3_9DINO)

HSP 1 Score: 71.6 bits (174), Expect = 3.010e-11
Identity = 59/183 (32.24%), Postives = 81/183 (44.26%), Query Frame = 0
Query:   95 YVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETI-AEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPG---VAFWWKSLLKGGPEIDVSAIQGRPVNKHRT---AWEEALGMYKENIAKRKAQGKIPIDIG 270
            Y W QT+  + V    P   +S D+ V +S    +I A G         +LEGE  F V  D   D DWE++   G                            RR + +T+ K + +PG   V  WW+ +LKG PEIDVS IQGR      T   AW +A   ++E++  RK    +PIDIG
Sbjct:   67 YFWSQTKDSIEVNAFVPEGTKSQDISVQVSETQVSIQAHGAS-------ILEGEWEFKVIPD--EDPDWEIRTLNG----------------------------RRAVCLTVKK-ADMPGGMSVIVWWRKVLKGEPEIDVSNIQGRKREASETFAKAWRDAHVQFRESVKNRKP---VPIDIG 208          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A7S0TY80_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TY80_HEMAN)

HSP 1 Score: 69.3 bits (168), Expect = 1.040e-10
Identity = 55/184 (29.89%), Postives = 85/184 (46.20%), Query Frame = 0
Query:   94 SYVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETI-AEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDF-PGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNK--HRTAWEEALGMYKENIAKRKAQGKIPIDIGEDG 273
            +++W Q ++   V V +P   R+  V VS+     TI  +G    +       GEL++PV LD E  VDWEL+D+  G IV                   +  +P    +     + S    V  WWK + KG  EIDV+AI+ RP N+  +  AW+EA   +++ + K     +IP+  G  G
Sbjct:   11 THLWSQDKTHAIVGVFAPANTRAKSVSVSVKGAHVTIDIKGNPDGRSP--WFAGELAYPVGLDEEEGVDWELQDYGEGRIVKVTL---------------EKKLPGMSSLPALQVESS----VVMWWKRIFKGDEEIDVTAIEDRPANREANANAWKEAHEKFRDMV-KNHTPMEIPMGDGGGG 172          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A7S0KK22_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KK22_9CHLO)

HSP 1 Score: 65.9 bits (159), Expect = 9.040e-9
Identity = 53/186 (28.49%), Postives = 81/186 (43.55%), Query Frame = 0
Query:   90 DGQLSYVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIA---EGVETRKEVIVLLEGELSFPVKLDGERDV---------DWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKH---RTAWEEALGMYKENIAKRK 260
            DG + Y WRQ   E T  V   P+ ++ DV V +S +   I+   +G E R+        E++   + + E D+         DWE+ DF G       H   +                RR + VT+ K S    +  WW+S +KGGPE+D    + R   K    +T W +A  M++E IA R+
Sbjct:  144 DGAVRYFWRQDAKEATASVVVAPKTKAKDVRVDVSAREVKISVMKDGGEIREVFRGEWAHEIAEEPRDEDEDDIGCRAAPTFGDWEITDFEG-------HGDDA----------------RRVVRVTVRKKSS-DMLVHWWRSCVKGGPEVDPMTFEDRSATKASQAQTTWAQAQAMFRERIANRE 305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KN83_9PHAE6.510e-7343.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJH1_9STRA1.760e-3234.56CS domain-containing protein n=1 Tax=Tribonema min... [more]
W7TNN6_9STRA1.010e-2630.71CS-like domain protein n=1 Tax=Nannochloropsis gad... [more]
A0A1J4MGJ4_9CRYT1.960e-1829.78Nuclear move domain-containing protein n=1 Tax=Cry... [more]
A0A2P4YYV1_9CRYT2.050e-1627.37CS domain protein n=4 Tax=Cryptosporidium TaxID=58... [more]
A0A4D9D0Z5_9STRA7.570e-1629.44CS domain-containing protein n=1 Tax=Nannochlorops... [more]
X6NBK4_RETFI1.070e-1125.79CS domain-containing protein n=1 Tax=Reticulomyxa ... [more]
A0A7S0AUT3_9DINO3.010e-1132.24Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A7S0TY80_HEMAN1.040e-1029.89Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S0KK22_9CHLO9.040e-928.49Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007052CS domainPFAMPF04969CScoord: 94..155
e-value: 5.9E-4
score: 20.8
IPR007052CS domainPROSITEPS51203CScoord: 90..222
score: 10.591
IPR037898NudC familyPANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 82..235
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 93..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98752contigH-elongata_contig98752:708..1772 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98752.17216.1mRNA_H-elongata_contig98752.17216.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98752 708..1772 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98752.17216.1 ID=prot_H-elongata_contig98752.17216.1|Name=mRNA_H-elongata_contig98752.17216.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bp
MSGLDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASSA
NPSQGSSNDISSYLHMSSEESTEAGPADKLSVVGSDQTTDGQLSYVWRQT
RSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLLEGELSF
PVKLDGERDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRG
IEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKHRTAWEEALG
MYKENIAKRKAQGKIPIDIGEDG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007052CS_dom
IPR037898NudC_fam
IPR008978HSP20-like_chaperone