mRNA_H-elongata_contig98752.17216.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig98752.17216.1
Unique NamemRNA_H-elongata_contig98752.17216.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A6H5KN83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN83_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 6.510e-73
Identity = 151/344 (43.90%), Postives = 193/344 (56.10%), Query Frame = 1
Query:    1 MSGLDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASS--ANPSQGSSNDISSYLHMSSEESTEAGPADKLS------------------VVGSDQTTDG-------------QLSYVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIV-----------------------------LLEGELSFPVKL--DGERDVDWELKDFPGTIVSR-----AAHNVASSTPNASSA----AKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKHRTAWEEALGMYKENIAKRKAQGKIPIDIGE 813
            MSG+DYSKWDKMA E+SDSD+D    GN P+VT FD+PQSVTFGG ++S  A    G+S+D  ++   +   S  A PAD  +                  ++  ++ T+               L YVWRQTR+EV VVVP P   R+ DV VSL  KPETIAEGV     V V                             +LEGEL+F  KL  + E +V+WELKD+PGT V+R     +   V S+ P A +A    A  +S  DRRG+E+ L KH P+P  A WWKSLLKGGPEIDV+AI+GR  N H++ WEEALGM+KE +A RK Q KI +D+ E
Sbjct:    1 MSGVDYSKWDKMASEMSDSDDDN---GNNPEVTTFDQPQSVTFGGTSASQAAEGWDGASDDSGAHPDTTPSSSGVAAPADGSTGAVAAAATGTTPTPQVKPLISDERLTENGAAVRGDANAGRQALQYVWRQTRAEVVVVVPVPAGTRAGDVEVSLRAKPETIAEGVADLIRVAVKATRGRDGAASRELGTAATAPGGGTKLVPVLEGELAFQAKLGAEDEGEVEWELKDYPGTAVARDDPDSSGDPVGSAPPPAPAAGAREASSSSNGDRRGVEIVLKKHCPVPNAAVWWKSLLKGGPEIDVAAIKGRATNNHQSVWEEALGMFKEQVAARKGQPKISVDMEE 341          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A836CJH1_9STRA (CS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH1_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.760e-32
Identity = 103/298 (34.56%), Postives = 153/298 (51.34%), Query Frame = 1
Query:   10 LDYSKWDKMAREVSDS-DEDGDNIGNIPQVTAFDKPQSVTFGGAASSANPS----------QGSSNDISSYLHMSSEESTEAGPADK------LSVVGSDQTTD-GQLSYVWRQTRSEVTVVVPSPPEIRSVDV---VVSLSPKPETIAEG-----VETRKEVIVLLEGELSFPVKLDGE--RDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPV---NKHRTAWEEALGMYKENIAKRKAQGKIPIDIG 810
            +DYSKWDKMA ++SDS DE+G   G+ P VTAFD P SVT+GG  +                      SS     +++S  A   DK      L+  G+    D G  +Y W Q+R +V + V +PP  R+ +V   V S +  P   A+      ++   +  +LLEG+L++PV LD +    VDW L+D  G     A  +   S  + S+A + +     R I VTL KHSPI G A WWK  +KGGP ID++AI+GR     +  +  W+EA+  ++  + + K + +  +DIG
Sbjct:    2 VDYSKWDKMAADMSDSEDEEG---GSKPVVTAFDNPTSVTWGGGDAPEEERLXXXXXXXXXXXXXXXXSSAGTPGADDSKRAALTDKPARLLTLTRNGAAVQDDCGAYTYFWSQSRGDVAITVVAPPGTRASEVEVKVTSDASAPTLAAQAPLGHHLKVSAKGAILLEGDLTYPVALDPDDPESVDWVLQDL-GLPARPAPESAVES--DVSTADQSSERSPARAITVTLRKHSPIAGAALWWKGAVKGGPTIDMAAIEGRDAKGASASQKVWDEAMEGFRARVKQLKLE-RTEVDIG 292          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: W7TNN6_9STRA (CS-like domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNN6_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.010e-26
Identity = 82/267 (30.71%), Postives = 129/267 (48.31%), Query Frame = 1
Query:   10 LDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASSANPSQGSSNDISSYLHMSSEESTEAGPADKLSVVGSDQTTDGQL--SYVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKHRTAWEEALGMYKENIAKRKAQGKIPID 804
            +DYSKWD +  + SD DED +     P+VT F++P SVT GG            + I S     S  ST   PA ++  +      +GQ   ++ WRQ R E  + + +PP  R+ DV V+ +     ++  + T   V VL+EG L+ P++L+   +V+WE+    G                     +       R + V+L K +P P +  WW  +  G  EID S I GR +N  + AWEEA   ++E++A+R AQG + ++
Sbjct:    6 IDYSKWDHL--DTSD-DEDEEEKRGPPRVTHFNEPMSVTVGGH----------DHLIPSRSPAPSPSSTTPHPASRIEDISE----NGQSFPTFTWRQDRGEAIMHIWAPPCTRAKDVQVTYTRDTNHLSVRITTPTAVPVLVEGPLANPIQLEEGEEVEWEMVGEGG---------------------RXXXXXXXRAVRVSLIKSTPRPDMVHWWSRVFVGDDEIDTSRIAGRKMN-FQGAWEEAQRRFREDVARRNAQGPVEVE 233          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A1J4MGJ4_9CRYT (Nuclear move domain-containing protein n=1 Tax=Cryptosporidium ubiquitum TaxID=857276 RepID=A0A1J4MGJ4_9CRYT)

HSP 1 Score: 91.7 bits (226), Expect = 1.960e-18
Identity = 81/272 (29.78%), Postives = 121/272 (44.49%), Query Frame = 1
Query:    1 MSGLDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASSANPSQGSSNDISSYLHMSSEESTEAGPADKLSVVGSDQTTDGQLS-----YVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQ--GRPVNKHRT-----AWEEALGMYKENIAKRK 780
            MSG+DYSKWDK+  E+S SDE+   +G+   VT FD PQS+T GG   S   S  SSN +   L       T++    +  V+  D    G  S     Y W QT + +T+++   P  ++ D+ V+++    T+  G ET     +L E E  + VK D +  + W +K+         A N  S                 R + + L K      +  WWK + KGG E D+S       P ++ R      AWEEA   ++  I  R+
Sbjct:    1 MSGIDYSKWDKI--EIS-SDEESGKLGSKCNVTRFDSPQSITIGGQRESKEDSLVSSNILVDDLK------TKSVLVSREKVISLDDYVFGGKSACGKDYYWTQTENGLTIILEIDPGTQNKDLKVNVTEDKVTVTHGSET-----ILFE-EFEYGVK-DDDNTIFWSVKEVESL---NGAQNKRS-----------------RMLVLELEKKELDTSIRLWWKKIFKGGIEADISKFSRFSSPKSEERNRKFLEAWEEAHNEFRNKIKNRQ 236          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A2P4YYV1_9CRYT (CS domain protein n=4 Tax=Cryptosporidium TaxID=5806 RepID=A0A2P4YYV1_9CRYT)

HSP 1 Score: 86.3 bits (212), Expect = 2.050e-16
Identity = 75/274 (27.37%), Postives = 122/274 (44.53%), Query Frame = 1
Query:    1 MSGLDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASSANPSQGSSNDISSYLHMSSEESTEAGPADKLSVVGSDQTTDGQLS-----YVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDFPG--TIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAI-------QGRPVNKHRTAWEEALGMYKENIAKRK 780
            MSG+DYSKWDK+  E+S SDE+ +   +   VT FD P S+TFGG   S        N ++S + +   +  E G   +  ++  +    G  S     Y W QT +++T+V+   PE++S D  V+++    TI  G+ET     +LLE +  + VK D +  + W +KD      + ++   N                    + + + L K      +  WWK + KGG E D+S         +     K    WE+A   ++  I  R+
Sbjct:    1 MSGIDYSKWDKI--EIS-SDEESEKSVSRCNVTRFDSPHSITFGGHIESEED-----NKVNSDVKVEEFKKIEPGHVSREKILSLNDYVFGGKSKNGKNYYWTQTENDLTIVIEISPEMQSKDFKVNVTESDITIMYGLET-----ILLE-KFEYEVKYD-DNTIFWSIKDVESFDKVQNKRIIN--------------------KMLVLELEKKELNNSIRIWWKRIFKGGIETDISKFNRFTSSNKEERNKKFLQVWEKAHDEFRNKIKNRQ 239          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A4D9D0Z5_9STRA (CS domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Z5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.570e-16
Identity = 53/180 (29.44%), Postives = 87/180 (48.33%), Query Frame = 1
Query:  268 DGQLS--YVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKHRTAWEEALGMYKENIAKRKAQGKIPI 801
            +GQ S  + WRQ + EV + + + P  R+ DV V+ S     ++  + T   V VL+EG L+ P++++ E +V+WE+    G                     +         + V+L K  P   +  WW  +  G  EID S I GR +N  + AWEEA   ++E++A+R AQG + +
Sbjct:   60 NGQSSPNFAWRQDKEEVILHIWAAPSTRAKDVQVTYSRDTNHLSVRITTPTAVPVLVEGTLANPIQVEEEEEVEWEMVGEGG---------------------RXXXXXXXXAVRVSLLKAVPRSDMVHWWSRVFVGDDEIDTSRIAGRKMN-FQGAWEEAQRKFREDVARRNAQGPVEV 217          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: X6NBK4_RETFI (CS domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NBK4_RETFI)

HSP 1 Score: 74.3 bits (181), Expect = 1.070e-11
Identity = 82/318 (25.79%), Postives = 128/318 (40.25%), Query Frame = 1
Query:    1 MSGLDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASSANPSQGSSNDISSYLHMSSEESTEAGPADKLSVVGS------DQ------------------------------TTDGQLS--YVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLL--------EGELSFPVKLDGERD--VDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKH--RTAWEEALGMYKENIAKRKAQGKIPID 804
            M+G++YSKW+K+A  +  SDE+  +  N P VT  D+P SVT G    + NPS  S+N  ++  + S  + T   P  K S   +      DQ                              T +G  +  Y+W QTR EV + + + P          LS K ++I       K  + +           ELS+ +    E D  ++WE+K FP    +  A  +                   + + + L K      V  WW ++ KG P IDV+AI+ R  +    R  W+ A   +KE + + + Q  I ID
Sbjct:    1 MTGINYSKWNKIAEALDSSDEE--SASNTPHVTKLDRPSSVTIGPTGVTINPSP-SNNQSTNANNKSVVKKTIENPTAKQSYNSTVPRQQKDQKATIVKPQNNEIIESKVKTKTLSELKAEVLTVNGGETDEYMWSQTRDEVVLFIKNIP----------LSTKAKSIKIQYNEEKNTVFIQCLDKILYNNKELSYNIVKTKEEDCGLEWEIKTFPFCDTNGIASQM-------------------KLLTIYLKKKEFSANVITWWGNVFKGDPSIDVAAIKERKTDAKTMRNIWQSAHESFKEKVKQFQPQ-TIEID 285          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A7S0AUT3_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AUT3_9DINO)

HSP 1 Score: 71.6 bits (174), Expect = 3.010e-11
Identity = 59/183 (32.24%), Postives = 81/183 (44.26%), Query Frame = 1
Query:  283 YVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETI-AEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPG---VAFWWKSLLKGGPEIDVSAIQGRPVNKHRT---AWEEALGMYKENIAKRKAQGKIPIDIG 810
            Y W QT+  + V    P   +S D+ V +S    +I A G         +LEGE  F V  D   D DWE++   G                            RR + +T+ K + +PG   V  WW+ +LKG PEIDVS IQGR      T   AW +A   ++E++  RK    +PIDIG
Sbjct:   67 YFWSQTKDSIEVNAFVPEGTKSQDISVQVSETQVSIQAHGAS-------ILEGEWEFKVIPD--EDPDWEIRTLNG----------------------------RRAVCLTVKK-ADMPGGMSVIVWWRKVLKGEPEIDVSNIQGRKREASETFAKAWRDAHVQFRESVKNRKP---VPIDIG 208          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A7S0TY80_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TY80_HEMAN)

HSP 1 Score: 69.3 bits (168), Expect = 1.040e-10
Identity = 55/184 (29.89%), Postives = 85/184 (46.20%), Query Frame = 1
Query:  280 SYVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETI-AEGVETRKEVIVLLEGELSFPVKLDGERDVDWELKDF-PGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNK--HRTAWEEALGMYKENIAKRKAQGKIPIDIGEDG 819
            +++W Q ++   V V +P   R+  V VS+     TI  +G    +       GEL++PV LD E  VDWEL+D+  G IV                   +  +P    +     + S    V  WWK + KG  EIDV+AI+ RP N+  +  AW+EA   +++ + K     +IP+  G  G
Sbjct:   11 THLWSQDKTHAIVGVFAPANTRAKSVSVSVKGAHVTIDIKGNPDGRSP--WFAGELAYPVGLDEEEGVDWELQDYGEGRIVKVTL---------------EKKLPGMSSLPALQVESS----VVMWWKRIFKGDEEIDVTAIEDRPANREANANAWKEAHEKFRDMV-KNHTPMEIPMGDGGGG 172          
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Match: A0A7S0KK22_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KK22_9CHLO)

HSP 1 Score: 65.9 bits (159), Expect = 9.040e-9
Identity = 53/186 (28.49%), Postives = 81/186 (43.55%), Query Frame = 1
Query:  268 DGQLSYVWRQTRSEVTVVVPSPPEIRSVDVVVSLSPKPETIA---EGVETRKEVIVLLEGELSFPVKLDGERDV---------DWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRGIEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKH---RTAWEEALGMYKENIAKRK 780
            DG + Y WRQ   E T  V   P+ ++ DV V +S +   I+   +G E R+        E++   + + E D+         DWE+ DF G       H   +                RR + VT+ K S    +  WW+S +KGGPE+D    + R   K    +T W +A  M++E IA R+
Sbjct:  144 DGAVRYFWRQDAKEATASVVVAPKTKAKDVRVDVSAREVKISVMKDGGEIREVFRGEWAHEIAEEPRDEDEDDIGCRAAPTFGDWEITDFEG-------HGDDA----------------RRVVRVTVRKKSS-DMLVHWWRSCVKGGPEVDPMTFEDRSATKASQAQTTWAQAQAMFRERIANRE 305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98752.17216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KN83_9PHAE6.510e-7343.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJH1_9STRA1.760e-3234.56CS domain-containing protein n=1 Tax=Tribonema min... [more]
W7TNN6_9STRA1.010e-2630.71CS-like domain protein n=1 Tax=Nannochloropsis gad... [more]
A0A1J4MGJ4_9CRYT1.960e-1829.78Nuclear move domain-containing protein n=1 Tax=Cry... [more]
A0A2P4YYV1_9CRYT2.050e-1627.37CS domain protein n=4 Tax=Cryptosporidium TaxID=58... [more]
A0A4D9D0Z5_9STRA7.570e-1629.44CS domain-containing protein n=1 Tax=Nannochlorops... [more]
X6NBK4_RETFI1.070e-1125.79CS domain-containing protein n=1 Tax=Reticulomyxa ... [more]
A0A7S0AUT3_9DINO3.010e-1132.24Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A7S0TY80_HEMAN1.040e-1029.89Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S0KK22_9CHLO9.040e-928.49Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98752contigH-elongata_contig98752:708..1772 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score65.9
Seed ortholog evalue3.5e-08
Seed eggNOG ortholog55529.EKX52154
EggNOG OGs2E6HQ@1,2SD7A@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size822
Cds size822
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98752.17216.1prot_H-elongata_contig98752.17216.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig98752 708..1772 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931377.1009738-CDS-H-elongata_contig98752:707..11271622931377.1009738-CDS-H-elongata_contig98752:707..1127Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig98752 708..1127 -
1691679811.2827017-CDS-H-elongata_contig98752:707..11271691679811.2827017-CDS-H-elongata_contig98752:707..1127Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig98752 708..1127 -
1622931377.1107707-CDS-H-elongata_contig98752:1241..13901622931377.1107707-CDS-H-elongata_contig98752:1241..1390Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig98752 1242..1390 -
1691679811.2924-CDS-H-elongata_contig98752:1241..13901691679811.2924-CDS-H-elongata_contig98752:1241..1390Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig98752 1242..1390 -
1622931377.1207793-CDS-H-elongata_contig98752:1519..17721622931377.1207793-CDS-H-elongata_contig98752:1519..1772Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig98752 1520..1772 -
1691679811.3004947-CDS-H-elongata_contig98752:1519..17721691679811.3004947-CDS-H-elongata_contig98752:1519..1772Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig98752 1520..1772 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig98752.17216.1

>prot_H-elongata_contig98752.17216.1 ID=prot_H-elongata_contig98752.17216.1|Name=mRNA_H-elongata_contig98752.17216.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bp
MSGLDYSKWDKMAREVSDSDEDGDNIGNIPQVTAFDKPQSVTFGGAASSA
NPSQGSSNDISSYLHMSSEESTEAGPADKLSVVGSDQTTDGQLSYVWRQT
RSEVTVVVPSPPEIRSVDVVVSLSPKPETIAEGVETRKEVIVLLEGELSF
PVKLDGERDVDWELKDFPGTIVSRAAHNVASSTPNASSAAKQTSIPDRRG
IEVTLAKHSPIPGVAFWWKSLLKGGPEIDVSAIQGRPVNKHRTAWEEALG
MYKENIAKRKAQGKIPIDIGEDG*
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mRNA from alignment at H-elongata_contig98752:708..1772-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig98752.17216.1 ID=mRNA_H-elongata_contig98752.17216.1|Name=mRNA_H-elongata_contig98752.17216.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1065bp|location=Sequence derived from alignment at H-elongata_contig98752:708..1772- (Himanthalia elongata Himel1 dioecious)
ATGAGTGGGCTGGACTACTCTAAGTGGGATAAGATGGCGAGAGAGGTGAG TGATAGCGACGAAGATGGCGATAACATCGGCAACATACCTCAGGTTACTG CTTTCGACAAACCACAGTCTGTTACCTTCGGTGGCGCAGCATCTTCAGCC AACCCCTCGCAAGGGTCCAGCAACGATATTTCTAGCTATCTCCACATGAG CTCCGAAGAATCTACTGAGGCAGGGCCAGCGGATAAATTAAGCGTGGTTG GCAGTAAAAGCACAGCAGAAAGCGACCGCTATGTCGGTGCCAATTCCGCC CCCGCCGGTTCTTTGGTTCCAAAGATCCCAAAGGCGATCGACGACGCACG CCTGGCGGAAAACGGTATGGCTGTAAGACAAGGCGACCAGACCACTGACG GACAACTGAGCTATGTTTGGCGGCAAACTAGGTCCGAGGTGACAGTAGTG GTACCTTCACCACCGGAGATACGTTCAGTAGACGTCGTGGTTTCCCTTTC GCCCAAGCCAGAGACGATCGCCGAGGGCGTGGTTGACTTGATTAAGGTAG CGGTCACCATCGCAAGGGGGCGGGGGGAGACTCACGCGGCTCGTACTTCT TCACATGCCGCTGGGTTGCAGCATGGGTGTCGGCGAGAAGAAGAGGAAAC AAGAAAAGAGGTGATAGTGCTCTTGGAAGGGGAGCTCTCGTTCCCGGTGA AGCTCGACGGGGAAAGGGACGTGGACTGGGAGCTGAAGGACTTTCCCGGA ACTATCGTCTCTAGAGCTGCTCATAATGTTGCTTCTTCGACACCTAATGC TTCTTCTGCTGCCAAACAAACATCCATTCCTGATCGCCGAGGAATCGAAG TGACACTCGCGAAGCACAGTCCAATACCTGGGGTGGCGTTTTGGTGGAAG TCTTTGCTGAAAGGCGGGCCTGAAATTGATGTGTCCGCGATTCAGGGCCG CCCCGTGAACAAGCATCGGACGGCCTGGGAAGAGGCACTTGGGATGTATA AGGAAAATATAGCCAAACGAAAGGCTCAAGGCAAAATTCCGATCGACATC GGAGAAGATGGATAG
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Coding sequence (CDS) from alignment at H-elongata_contig98752:708..1772-

>mRNA_H-elongata_contig98752.17216.1 ID=mRNA_H-elongata_contig98752.17216.1|Name=mRNA_H-elongata_contig98752.17216.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1644bp|location=Sequence derived from alignment at H-elongata_contig98752:708..1772- (Himanthalia elongata Himel1 dioecious)
ATGAGTGGGCTGGACTACTCTAAGTGGGATAAGATGGCGAGAGAGGTGAG
TGATAGCGACGAAGATGGCGATAACATCGGCAACATACCTCAGGTTACTG
CTTTCGACAAACCACAGTCTGTTACCTTCGGTGGCGCAGCATCTTCAGCC
AACCCCTCGCAAGGGTCCAGCAACGATATTTCTAGCTATCTCCACATGAG
CTCCGAAGAATCTACTGAGGCAGGGCCAGCGGATAAATTAAGCGTGGTTG
GCAATGAGTGGGCTGGACTACTCTAAGTGGGATAAGATGGCGAGAGAGGT
GAGTGATAGCGACGAAGATGGCGATAACATCGGCAACATACCTCAGGTTA
CTGCTTTCGACAAACCACAGTCTGTTACCTTCGGTGGCGCAGCATCTTCA
GCCAACCCCTCGCAAGGGTCCAGCAACGATATTTCTAGCTATCTCCACAT
GAGCTCCGAAGAATCTACTGAGGCAGGGCCAGCGGATAAATTAAGCGTGG
TTGGCAGCGACCAGACCACTGACGGACAACTGAGCTATGTTTGGCGGCAA
ACTAGGTCCGAGGTGACAGTAGTGGTACCTTCACCACCGGAGATACGTTC
AGTAGACGTCGTGGTTTCCCTTTCGCCCAAGCCAGAGACGATCGCCGAGG
GCGTGGCGACCAGACCACTGACGGACAACTGAGCTATGTTTGGCGGCAAA
CTAGGTCCGAGGTGACAGTAGTGGTACCTTCACCACCGGAGATACGTTCA
GTAGACGTCGTGGTTTCCCTTTCGCCCAAGCCAGAGACGATCGCCGAGGG
CGTGGAAACAAGAAAAGAGGTGATAGTGCTCTTGGAAGGGGAGCTCTCGT
TCCCGGTGAAGCTCGACGGGGAAAGGGACGTGGACTGGGAGCTGAAGGAC
TTTCCCGGAACTATCGTCTCTAGAGCTGCTCATAATGTTGCTTCTTCGAC
ACCTAATGCTTCTTCTGCTGCCAAACAAACATCCATTCCTGATCGCCGAG
GAATCGAAGTGACACTCGCGAAGCACAGTCCAATACCTGGGGTGGCGTTT
TGGTGGAAGTCTTTGCTGAAAGGCGGGCCTGAAATTGATGTGTCCGCGAT
TCAGGGCCGCCCCGTGAACAAGCATCGGACGGCCTGGGAAGAGGCACTTG
GGATGTATAAGGAAAATATAGCCAAACGAAAGGCTCAAGGCAAAATTCCG
ATCGACATCGGAGAAGATGGATAGGAAACAAGAAAAGAGGTGATAGTGCT
CTTGGAAGGGGAGCTCTCGTTCCCGGTGAAGCTCGACGGGGAAAGGGACG
TGGACTGGGAGCTGAAGGACTTTCCCGGAACTATCGTCTCTAGAGCTGCT
CATAATGTTGCTTCTTCGACACCTAATGCTTCTTCTGCTGCCAAACAAAC
ATCCATTCCTGATCGCCGAGGAATCGAAGTGACACTCGCGAAGCACAGTC
CAATACCTGGGGTGGCGTTTTGGTGGAAGTCTTTGCTGAAAGGCGGGCCT
GAAATTGATGTGTCCGCGATTCAGGGCCGCCCCGTGAACAAGCATCGGAC
GGCCTGGGAAGAGGCACTTGGGATGTATAAGGAAAATATAGCCAAACGAA
AGGCTCAAGGCAAAATTCCGATCGACATCGGAGAAGATGGATAG
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