prot_H-elongata_contig9861.17206.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9861.17206.1
Unique Nameprot_H-elongata_contig9861.17206.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: A0A6H5KA14_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 2.370e-26
Identity = 53/74 (71.62%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 MLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQLV 74
            +LRYRG+ S++ DGNPL WWD+H++T PLLREL+ R+LCVPASSA+SERLFSKAGLTLTK+ S L   RVAQLV
Sbjct:  487 VLRYRGVTSMNPDGNPLTWWDQHKATFPLLRELSHRILCVPASSAASERLFSKAGLTLTKQRSLLAGNRVAQLV 560          
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: D8LDT4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT4_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.220e-14
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 0
Query:    1 MLRYRGINSIDIDGNPLAWWDEHQS--TLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVA 71
            +LRYR ++ ID + +PL WW++ Q   + P LREL  RVLCVPA SASS+R+FSK GL    K ++L+  RVA
Sbjct:  825 VLRYRALDKIDSEADPLLWWEQEQQRWSFPFLRELVMRVLCVPACSASSKRVFSKTGLVDNSKRARLRGSRVA 897          
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: A0A6H5KHJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ9_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 4.100e-14
Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 MLRYRGINSIDIDGNPLAWWDEHQS--TLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQ 72
            +LRYR ++ ID + +PL WW++ Q   + P LR+LA RVLCVPA SASS+RLF K G+    K ++L+  RVAQ
Sbjct:  391 VLRYRALDKIDSESDPLLWWEQGQQRWSFPSLRQLAMRVLCVPACSASSKRLFFKTGVVGNSKRARLRGSRVAQ 464          
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: UPI001E1CD40C (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CD40C)

HSP 1 Score: 67.8 bits (164), Expect = 7.020e-12
Identity = 35/72 (48.61%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    1 MLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQ 72
            + RY   N I  DG+PLAWW EH    P L +LA R LC  ASS  SERLFSKAG  ++ + S +K   +A+
Sbjct:  178 LKRYFEENHISRDGDPLAWWKEHDMYFPKLSDLAKRFLCTSASSVPSERLFSKAGELISHRRSNIKDTNLAR 249          
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: UPI001E1D12E4 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D12E4)

HSP 1 Score: 67.4 bits (163), Expect = 1.960e-11
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    1 MLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLK 66
            + RY   N I  DG+PLAWW EH    P L +LA R LC  ASS  SERLFSKAG  ++ + S +K
Sbjct:  309 LKRYFEENHISRDGDPLAWWKEHDMYFPKLSDLAKRFLCTSASSVPSERLFSKAGELISHRRSNIK 374          
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: UPI001E1D0815 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D0815)

HSP 1 Score: 67.4 bits (163), Expect = 2.140e-11
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    1 MLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLK 66
            + RY   N I  DG+PLAWW EH    P L +LA R LC  ASS  SERLFSKAG  ++ + S +K
Sbjct:  425 LKRYFEENHISRDGDPLAWWKEHDMYFPKLSDLAKRFLCTSASSVPSERLFSKAGELISHRRSNIK 490          
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: A0A8C1JAT0_CYPCA (BED-type domain-containing protein n=6 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A8C1JAT0_CYPCA)

HSP 1 Score: 66.6 bits (161), Expect = 4.040e-11
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    1 MLRYRGINSIDI-DGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQLV 74
            M RY+    + + +G+PL+WW EHQ+  PL+  LA   LC+P +S SSER+FSKAG  +T + S L    V QL+
Sbjct:  538 MSRYKEAPPLSLAEGSPLSWWKEHQNEYPLMSRLAKVYLCIPGTSVSSERVFSKAGDIVTAQRSVLSSKHVDQLL 612          
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: UPI000B933A0F (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B933A0F)

HSP 1 Score: 63.5 bits (153), Expect = 4.440e-11
Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = 0
Query:    3 RYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQLV 74
            RY     I+ + +P AWW +H++  P L  LA ++LC+PASSASSER+FS AG  L+ K +++    ++ LV
Sbjct:   57 RYMAEFQINHNADPCAWWKDHENIYPTLAVLAKQILCIPASSASSERVFSTAGNILSPKRNRITPCHLSALV 128          
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: A0A6P6MPP8_CARAU (zinc finger BED domain-containing protein 1-like n=1 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6MPP8_CARAU)

HSP 1 Score: 66.2 bits (160), Expect = 5.260e-11
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    7 INSIDIDG--NPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQLV 74
            + ++++DG  NPL WW +H++  P +  LA + LC+PA+SA SER FS +G  +T + S LK  RV QLV
Sbjct:  332 LQAVEVDGETNPLEWWRQHEANFPRVASLAKKYLCIPATSAPSERAFSTSGNIVTCRRSALKPERVDQLV 401          
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: UPI002013ED00 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI002013ED00)

HSP 1 Score: 66.2 bits (160), Expect = 5.520e-11
Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    7 INSIDIDG--NPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQLV 74
            + ++++DG  NPL WW +H++  P +  LA + LC+PA+SA SER FS +G  +T + S LK  RV QLV
Sbjct:  562 LQAVEVDGETNPLEWWRQHEANFPRVASLAKKYLCIPATSAPSERAFSTSGNIVTCRRSALKPERVDQLV 631          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KA14_9PHAE2.370e-2671.62Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
D8LDT4_ECTSI1.220e-1452.05Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KHJ9_9PHAE4.100e-1451.35Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
UPI001E1CD40C7.020e-1248.61E3 SUMO-protein ligase ZBED1-like n=1 Tax=Portunus... [more]
UPI001E1D12E41.960e-1151.52E3 SUMO-protein ligase ZBED1-like n=1 Tax=Portunus... [more]
UPI001E1D08152.140e-1151.52E3 SUMO-protein ligase ZBED1-like n=1 Tax=Portunus... [more]
A0A8C1JAT0_CYPCA4.040e-1145.33BED-type domain-containing protein n=6 Tax=Osteogl... [more]
UPI000B933A0F4.440e-1143.06zinc finger BED domain-containing protein 1-like n... [more]
A0A6P6MPP8_CARAU5.260e-1145.71zinc finger BED domain-containing protein 1-like n... [more]
UPI002013ED005.520e-1145.71E3 SUMO-protein ligase ZBED1-like n=1 Tax=Megalobr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 13..73
e-value: 4.9E-16
score: 58.3
NoneNo IPR availablePANTHERPTHR47611FAMILY NOT NAMEDcoord: 9..74
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9861contigH-elongata_contig9861:8290..8511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9861.17206.1mRNA_H-elongata_contig9861.17206.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9861 8287..8511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9861.17206.1 ID=prot_H-elongata_contig9861.17206.1|Name=mRNA_H-elongata_contig9861.17206.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
MLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERL
FSKAGLTLTKKHSKLKLPRVAQLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf