mRNA_H-elongata_contig9861.17206.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: A0A6H5KA14_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE) HSP 1 Score: 112 bits (280), Expect = 2.680e-27 Identity = 54/75 (72.00%), Postives = 65/75 (86.67%), Query Frame = 1
Query: 1 EMLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQLV 225
E+LRYRG+ S++ DGNPL WWD+H++T PLLREL+ R+LCVPASSA+SERLFSKAGLTLTK+ S L RVAQLV
Sbjct: 486 EVLRYRGVTSMNPDGNPLTWWDQHKATFPLLRELSHRILCVPASSAASERLFSKAGLTLTKQRSLLAGNRVAQLV 560
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: D8LDT4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT4_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 1.440e-15 Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 1
Query: 1 EMLRYRGINSIDIDGNPLAWWDEHQS--TLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVA 216
E+LRYR ++ ID + +PL WW++ Q + P LREL RVLCVPA SASS+R+FSK GL K ++L+ RVA
Sbjct: 824 EVLRYRALDKIDSEADPLLWWEQEQQRWSFPFLRELVMRVLCVPACSASSKRVFSKTGLVDNSKRARLRGSRVA 897
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: A0A6H5KHJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ9_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 4.770e-15 Identity = 39/75 (52.00%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 1 EMLRYRGINSIDIDGNPLAWWDEHQS--TLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQ 219
E+LRYR ++ ID + +PL WW++ Q + P LR+LA RVLCVPA SASS+RLF K G+ K ++L+ RVAQ
Sbjct: 390 EVLRYRALDKIDSESDPLLWWEQGQQRWSFPSLRQLAMRVLCVPACSASSKRLFFKTGVVGNSKRARLRGSRVAQ 464
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: UPI001E1CD40C (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CD40C) HSP 1 Score: 70.5 bits (171), Expect = 7.130e-13 Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1 EMLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQ 219
E+ RY N I DG+PLAWW EH P L +LA R LC ASS SERLFSKAG ++ + S +K +A+
Sbjct: 177 ELKRYFEENHISRDGDPLAWWKEHDMYFPKLSDLAKRFLCTSASSVPSERLFSKAGELISHRRSNIKDTNLAR 249
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: UPI001E1D12E4 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D12E4) HSP 1 Score: 70.1 bits (170), Expect = 2.220e-12 Identity = 35/67 (52.24%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 1 EMLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLK 201
E+ RY N I DG+PLAWW EH P L +LA R LC ASS SERLFSKAG ++ + S +K
Sbjct: 308 ELKRYFEENHISRDGDPLAWWKEHDMYFPKLSDLAKRFLCTSASSVPSERLFSKAGELISHRRSNIK 374
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: UPI001E1D0815 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D0815) HSP 1 Score: 70.1 bits (170), Expect = 2.500e-12 Identity = 35/67 (52.24%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 1 EMLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLK 201
E+ RY N I DG+PLAWW EH P L +LA R LC ASS SERLFSKAG ++ + S +K
Sbjct: 424 ELKRYFEENHISRDGDPLAWWKEHDMYFPKLSDLAKRFLCTSASSVPSERLFSKAGELISHRRSNIK 490
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: A0A8C1JAT0_CYPCA (BED-type domain-containing protein n=6 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A8C1JAT0_CYPCA) HSP 1 Score: 69.3 bits (168), Expect = 4.730e-12 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 1 EMLRYRGINSIDI-DGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQLV 225
EM RY+ + + +G+PL+WW EHQ+ PL+ LA LC+P +S SSER+FSKAG +T + S L V QL+
Sbjct: 537 EMSRYKEAPPLSLAEGSPLSWWKEHQNEYPLMSRLAKVYLCIPGTSVSSERVFSKAGDIVTAQRSVLSSKHVDQLL 612
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: UPI000B933A0F (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B933A0F) HSP 1 Score: 65.9 bits (159), Expect = 5.800e-12 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 1 EMLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQLV 225
E RY I+ + +P AWW +H++ P L LA ++LC+PASSASSER+FS AG L+ K +++ ++ LV
Sbjct: 54 EFSRYMAEFQINHNADPCAWWKDHENIYPTLAVLAKQILCIPASSASSERVFSTAGNILSPKRNRITPCHLSALV 128
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: UPI00106C4427 (zinc finger BED domain-containing protein 1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C4427) HSP 1 Score: 67.8 bits (164), Expect = 1.430e-11 Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 1 EMLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQLV 225
E+ RY +ID D +PL WW H++ PLL + R L +PASSA +ERLFSKAG +T K LK + LV
Sbjct: 282 EIARYLQFPTIDGDDDPLQWWKFHENDFPLLSQYVRRYLAIPASSAPTERLFSKAGQIVTAKRVNLKPSQANMLV 356
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Match: A0A6P6MPP8_CARAU (zinc finger BED domain-containing protein 1-like n=1 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6MPP8_CARAU) HSP 1 Score: 67.0 bits (162), Expect = 2.920e-11 Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 1 EMLRYRGINSIDIDG--NPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLFSKAGLTLTKKHSKLKLPRVAQLV 225
EM + ++++DG NPL WW +H++ P + LA + LC+PA+SA SER FS +G +T + S LK RV QLV
Sbjct: 325 EMELNSYLQAVEVDGETNPLEWWRQHEANFPRVASLAKKYLCIPATSAPSERAFSTSGNIVTCRRSALKPERVDQLV 401 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9861.17206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9861.17206.1 >prot_H-elongata_contig9861.17206.1 ID=prot_H-elongata_contig9861.17206.1|Name=mRNA_H-elongata_contig9861.17206.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp MLRYRGINSIDIDGNPLAWWDEHQSTLPLLRELATRVLCVPASSASSERLback to top mRNA from alignment at H-elongata_contig9861:8287..8511+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9861.17206.1 ID=mRNA_H-elongata_contig9861.17206.1|Name=mRNA_H-elongata_contig9861.17206.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=225bp|location=Sequence derived from alignment at H-elongata_contig9861:8287..8511+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9861:8287..8511+ >mRNA_H-elongata_contig9861.17206.1 ID=mRNA_H-elongata_contig9861.17206.1|Name=mRNA_H-elongata_contig9861.17206.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at H-elongata_contig9861:8287..8511+ (Himanthalia elongata Himel1 dioecious)back to top |