prot_H-elongata_contig98551.17201.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98551.17201.1
Unique Nameprot_H-elongata_contig98551.17201.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
[Close]
BLAST of mRNA_H-elongata_contig98551.17201.1 vs. uniprot
Match: D8LRS3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRS3_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 5.300e-28
Identity = 61/85 (71.76%), Postives = 74/85 (87.06%), Query Frame = 0 
Query:    1 DSSADEASLTDQLAHFEMEAETLKKTRIAQQEKFRKLSEEVIHLSVVLGEDSDANLAEWRDVESSLTQERLEAFSKKKMELNKAT 85
            DSS D+ SLTDQLA++EMEA+ +KK   AQQEKF KLSEE++H+S+VLG+DSDA+LAEWRD+ESSLT ERL+AF  KK ELNKAT
Sbjct:   94 DSSTDDMSLTDQLAYYEMEADAIKKMCKAQQEKFEKLSEELVHMSMVLGDDSDADLAEWRDLESSLTNERLQAFKDKKTELNKAT 178
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98551.17201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRS3_ECTSI5.300e-2871.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98551contigH-elongata_contig98551:181..658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98551.17201.1mRNA_H-elongata_contig98551.17201.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98551 181..658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98551.17201.1 ID=prot_H-elongata_contig98551.17201.1|Name=mRNA_H-elongata_contig98551.17201.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
DSSADEASLTDQLAHFEMEAETLKKTRIAQQEKFRKLSEEVIHLSVVLGE
DSDANLAEWRDVESSLTQERLEAFSKKKMELNKATVN*
back to top