prot_H-elongata_contig98366.17182.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98366.17182.1
Unique Nameprot_H-elongata_contig98366.17182.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
BLAST of mRNA_H-elongata_contig98366.17182.1 vs. uniprot
Match: D8LDU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU5_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 1.700e-29
Identity = 52/92 (56.52%), Postives = 69/92 (75.00%), Query Frame = 0
Query:   87 ECSSSGLSDAAHDQLAIYAKDIYVEPDCMDATMSLLL-CNYMGLGQECRGCFTTCDGAIDYMTNNSEEVNELGTNAILVFCPDAEVEDFADC 177
            EC  S LSDAA +QL++Y KD+Y+EPDC++    + + CNYMGLGQECRGCF TCDGA  Y+ + +EE++  G +AI+ FCPDAEVE   +C
Sbjct:   24 ECIVSSLSDAAQEQLSMYDKDLYLEPDCVNGASPMPVHCNYMGLGQECRGCFMTCDGATRYLDDFAEEISVWGVDAIVHFCPDAEVELLEEC 115          
BLAST of mRNA_H-elongata_contig98366.17182.1 vs. uniprot
Match: D8LDU6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU6_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 2.160e-23
Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 0
Query:   88 CSSSGLSDAAHDQLAIYAKDIYVEPDCM-DATMSLLLCNYMGLGQECRGCFTTCDGAIDYMTNNSEEVNELGTNAILVFCPDAEVEDFADC 177
            CS   L+DA   QLA+Y  D+Y+E DC+ D+T   L CNYMGLGQECRGCF TC GA+ Y+ + +E + E G +A++ FCP +EV D A+C
Sbjct:  584 CSMDSLNDADQQQLALYDNDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLTCAGALTYIDDKAEHILEYGEDAVINFCPQSEVSDLAEC 674          
BLAST of mRNA_H-elongata_contig98366.17182.1 vs. uniprot
Match: A0A6H5KWI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI6_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 5.790e-13
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 0
Query:   88 CSSSGLSDAAHDQLAIYAKDIYVEPDCM-DATMSLLLCNYMGLGQECRGCFTTCDGAIDYMTNNSEEVNELGTNAILVFCPDAEVEDFADC 177
            CS   L+D    QL +Y  D+Y+E DC+ D+T   L CNYMGLGQECRGCF                 +  G +A++ FCP +EV D A+C
Sbjct:  489 CSRDSLNDVDQQQLNLYENDMYLEDDCVNDSTPLPLGCNYMGLGQECRGCFLAL-------------AHVKGEDAVINFCPQSEVSDLAEC 566          
BLAST of mRNA_H-elongata_contig98366.17182.1 vs. uniprot
Match: A0A6H5KP24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP24_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 2.280e-6
Identity = 28/69 (40.58%), Postives = 38/69 (55.07%), Query Frame = 0
Query:  103 IYAKDIYVEPDCMDATMSLLL-CNYMGLGQECRGCFTTCDGAIDYMTNNSEEVNELGTNAILVFCPDAE 170
            +Y K +Y+EPDC++    + + CNYMGLGQECRGCF   + A+             G    + FCP AE
Sbjct:    1 MYDKGLYLEPDCVNGASPMPVHCNYMGLGQECRGCFMDKEIAV-----------VRGDRGGMCFCPLAE 58          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98366.17182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LDU5_ECTSI1.700e-2956.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDU6_ECTSI2.160e-2352.75N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5KWI6_9PHAE5.790e-1342.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP24_9PHAE2.280e-640.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98366contigH-elongata_contig98366:1438..2280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98366.17182.1mRNA_H-elongata_contig98366.17182.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98366 369..2308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98366.17182.1 ID=prot_H-elongata_contig98366.17182.1|Name=mRNA_H-elongata_contig98366.17182.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
MPVVPTMTPTKSIPMPPTPAPVSIIEPTSAPIAKGSDATVVPTMMPGVSN
PTPMIAIPTPAPLTSKFGPSPGTTPSPISPSTAPSSECSSSGLSDAAHDQ
LAIYAKDIYVEPDCMDATMSLLLCNYMGLGQECRGCFTTCDGAIDYMTNN
SEEVNELGTNAILVFCPDAEVEDFADC*
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