prot_H-elongata_contig98312.17181.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98312.17181.1
Unique Nameprot_H-elongata_contig98312.17181.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length174
Homology
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BLAST of mRNA_H-elongata_contig98312.17181.1 vs. uniprot
Match: D8LG86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG86_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 4.980e-38
Identity = 100/174 (57.47%), Postives = 121/174 (69.54%), Query Frame = 0 
Query:    1 QRALEIKRLKQKNQELARARESNARMQGKNATNHERAVAERKIKLKNDLQSTKANLEKERKTNAKSSREQRQALQMTYQEIRAQNAMENRQRRSMIRKQREDAXXXXXXXXXXXXAQQQGEQL-RTVLHGKTTQDAERMIEKMEKDEDALIERLKKIQEDQRRAYQLLQESLES 173
            QRA+EIKRLKQ+NQ+LA  RESNAR QGKN++NHERA+A+RK K ++DLQSTKANLEK+R+TNA        ALQMTYQ        ENR+R  M+R    +A        XXXX         R       TQ+AERMIEKME+DED LIERLKK+Q++QR+AY+LL ESLES
Sbjct:   88 QRAMEIKRLKQQNQQLALERESNARTQGKNSSNHERALAQRKQKQQHDLQSTKANLEKQRRTNAXXXXXXXXALQMTYQXXXXXXXAENRRRTEMVRXXXXEARLKKEAEQXXXXXXXXXXXXXRIEAEXXXTQEAERMIEKMEQDEDVLIERLKKVQDEQRKAYELLHESLES 261
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98312.17181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG86_ECTSI4.980e-3857.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..170
NoneNo IPR availableCOILSCoilCoilcoord: 6..29
NoneNo IPR availableCOILSCoilCoilcoord: 106..126
NoneNo IPR availableCOILSCoilCoilcoord: 39..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98312contigH-elongata_contig98312:596..2311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98312.17181.1mRNA_H-elongata_contig98312.17181.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98312 596..2311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98312.17181.1 ID=prot_H-elongata_contig98312.17181.1|Name=mRNA_H-elongata_contig98312.17181.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp
QRALEIKRLKQKNQELARARESNARMQGKNATNHERAVAERKIKLKNDLQ
STKANLEKERKTNAKSSREQRQALQMTYQEIRAQNAMENRQRRSMIRKQR
EDARLKREARQREREAQQQGEQLRTVLHGKTTQDAERMIEKMEKDEDALI
ERLKKIQEDQRRAYQLLQESLES*
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